RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 hDV102S1A0JD36 115 aa7.39□□□□□ -1.23
HMGCS1-204ENST00000507293 F2Z2F3 143 aa7.39□□□□□ -1.23
HMGCS1-204ENST00000507293 CNBPP62633 177 aaKnown RBP7.39□□□□□ -1.23
HMGCS1-204ENST00000507293 LYZL1Q6UWQ5 148 aa7.39□□□□□ -1.23
HMGCS1-204ENST00000507293 PGLYRP4Q96LB8 373 aa7.39□□□□□ -1.23
HMGCS1-204ENST00000507293 A0A1B0GUV1 79 aa7.38□□□□□ -1.23
HMGCS1-204ENST00000507293 UBE2L6O14933 153 aa7.38□□□□□ -1.23
HMGCS1-204ENST00000507293 PDE6DO43924 150 aa7.38□□□□□ -1.23
HMGCS1-204ENST00000507293 NTF3P20783 257 aa7.38□□□□□ -1.23
HMGCS1-204ENST00000507293 AMTP48728 403 aa7.38□□□□□ -1.23
HMGCS1-204ENST00000507293 NIT2Q9NQR4 276 aa7.38□□□□□ -1.23
HMGCS1-204ENST00000507293 BIN3Q9NQY0 253 aa7.38□□□□□ -1.23
HMGCS1-204ENST00000507293 MED9Q9NWA0 146 aa7.38□□□□□ -1.23
HMGCS1-204ENST00000507293 PKHD1L1Q86WI1 4243 aa7.38□□□□□ -1.23
HMGCS1-204ENST00000507293 IGHV3-64A0A075B6Q5 118 aa7.37□□□□□ -1.23
HMGCS1-204ENST00000507293 BCL2P10415 239 aa7.37□□□□□ -1.23
HMGCS1-204ENST00000507293 CTRLP40313 264 aa7.37□□□□□ -1.23
HMGCS1-204ENST00000507293 CIRBPQ14011 172 aaKnown RBP7.37□□□□□ -1.23
HMGCS1-204ENST00000507293 COTL1Q14019 142 aa7.37□□□□□ -1.23
HMGCS1-204ENST00000507293 WDR73Q6P4I2 378 aa7.37□□□□□ -1.23
HMGCS1-204ENST00000507293 AP5S1Q9NUS5 200 aa7.37□□□□□ -1.23
HMGCS1-204ENST00000507293 PLA2G2DQ9UNK4 145 aa7.37□□□□□ -1.23
HMGCS1-204ENST00000507293 SLPIP03973 132 aa7.36□□□□□ -1.23
HMGCS1-204ENST00000507293 CHTF8P0CG12 524 aa7.36□□□□□ -1.23
HMGCS1-204ENST00000507293 NUDT10Q8NFP7 164 aa7.36□□□□□ -1.23
HMGCS1-204ENST00000507293 NUDT11Q96G61 164 aa7.36□□□□□ -1.23
HMGCS1-204ENST00000507293 HMCN2Q8NDA2 5059 aa7.36□□□□□ -1.23
HMGCS1-204ENST00000507293 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.35□□□□□ -1.23
HMGCS1-204ENST00000507293 TRAV26-2A0A0B4J265 109 aa7.35□□□□□ -1.23
HMGCS1-204ENST00000507293 IGKV3OR2-268A0A0C4DH90 116 aa7.35□□□□□ -1.23
HMGCS1-204ENST00000507293 TWIST1Q15672 202 aa7.35□□□□□ -1.23
HMGCS1-204ENST00000507293 TEX261Q6UWH6 196 aa7.35□□□□□ -1.23
HMGCS1-204ENST00000507293 LYPD6BQ8NI32 183 aa7.35□□□□□ -1.23
HMGCS1-204ENST00000507293 RPP21Q9H633 154 aaKnown RBP7.35□□□□□ -1.23
HMGCS1-204ENST00000507293 A0A087WYN8 130 aa7.34□□□□□ -1.23
HMGCS1-204ENST00000507293 GAGE12HA6NDE8 117 aa7.34□□□□□ -1.23
HMGCS1-204ENST00000507293 C15orf56Q8N910 161 aa7.34□□□□□ -1.23
HMGCS1-204ENST00000507293 GATD1Q8NB37 220 aa7.34□□□□□ -1.23
HMGCS1-204ENST00000507293 SPACA4Q8TDM5 124 aa7.34□□□□□ -1.23
HMGCS1-204ENST00000507293 DPH3Q96FX2 82 aa7.34□□□□□ -1.23
HMGCS1-204ENST00000507293 CNFNQ9BYD5 112 aa7.34□□□□□ -1.23
HMGCS1-204ENST00000507293 RNASE7Q9H1E1 156 aaKnown RBP7.34□□□□□ -1.23
HMGCS1-204ENST00000507293 K7EN84 100 aa7.33□□□□□ -1.24
HMGCS1-204ENST00000507293 RPL39LQ96EH5 51 aaKnown RBP7.33□□□□□ -1.24
HMGCS1-204ENST00000507293 RNF185Q96GF1 192 aa7.33□□□□□ -1.24
HMGCS1-204ENST00000507293 MT1HL1P0DM35 61 aa7.32□□□□□ -1.24
HMGCS1-204ENST00000507293 HIGD2BQ4VC39 106 aa7.32□□□□□ -1.24
HMGCS1-204ENST00000507293 AMMECR1LQ6DCA0 310 aa7.32□□□□□ -1.24
HMGCS1-204ENST00000507293 CFAP161Q6P656 301 aa7.32□□□□□ -1.24
HMGCS1-204ENST00000507293 Q6ZRU5 148 aa7.32□□□□□ -1.24
HMGCS1-204ENST00000507293 OCC1Q8TAD7 63 aa7.32□□□□□ -1.24
HMGCS1-204ENST00000507293 EIF5A2Q9GZV4 153 aaKnown RBP7.32□□□□□ -1.24
HMGCS1-204ENST00000507293 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.31□□□□□ -1.24
HMGCS1-204ENST00000507293 IGKV2-29A2NJV5 120 aaPredicted RBP7.31□□□□□ -1.24
HMGCS1-204ENST00000507293 TMEM250H0YL14 139 aa7.31□□□□□ -1.24
HMGCS1-204ENST00000507293 NDUFS6O75380 124 aaKnown RBP7.31□□□□□ -1.24
HMGCS1-204ENST00000507293 NCR2O95944 276 aa7.31□□□□□ -1.24
HMGCS1-204ENST00000507293 APCSP02743 223 aa7.31□□□□□ -1.24
HMGCS1-204ENST00000507293 FOXA3P55318 350 aaPredicted RBP7.31□□□□□ -1.24
HMGCS1-204ENST00000507293 RNASEKQ6P5S7 137 aaKnown RBP7.31□□□□□ -1.24
HMGCS1-204ENST00000507293 GTSF1Q8WW33 167 aa7.31□□□□□ -1.24
HMGCS1-204ENST00000507293 CHCHD10Q8WYQ3 142 aaPredicted RBP7.31□□□□□ -1.24
HMGCS1-204ENST00000507293 RPS10P46783 165 aaKnown RBP7.3□□□□□ -1.24
HMGCS1-204ENST00000507293 COX6A2Q02221 97 aa7.3□□□□□ -1.24
HMGCS1-204ENST00000507293 SMIM15Q7Z3B0 74 aa7.3□□□□□ -1.24
HMGCS1-204ENST00000507293 FAM210AQ96ND0 272 aa7.3□□□□□ -1.24
HMGCS1-204ENST00000507293 PLAC8Q9NZF1 115 aa7.3□□□□□ -1.24
HMGCS1-204ENST00000507293 SDHAF1A6NFY7 115 aa7.29□□□□□ -1.24
HMGCS1-204ENST00000507293 PHOX2AO14813 284 aa7.29□□□□□ -1.24
HMGCS1-204ENST00000507293 GATCO43716 136 aaKnown RBP7.29□□□□□ -1.24
HMGCS1-204ENST00000507293 FGF6P10767 208 aa7.29□□□□□ -1.24
HMGCS1-204ENST00000507293 RAB14P61106 215 aa7.29□□□□□ -1.24
HMGCS1-204ENST00000507293 C7orf33Q8WU49 177 aa7.29□□□□□ -1.24
HMGCS1-204ENST00000507293 GVQW2A0A096LPI5 108 aaPredicted RBP7.28□□□□□ -1.24
HMGCS1-204ENST00000507293 IGKV2-24A0A0C4DH68 120 aa7.28□□□□□ -1.24
HMGCS1-204ENST00000507293 H7C423 109 aa7.28□□□□□ -1.24
HMGCS1-204ENST00000507293 FOXI1Q12951 378 aa7.28□□□□□ -1.24
HMGCS1-204ENST00000507293 PEA15Q15121 130 aa7.28□□□□□ -1.24
HMGCS1-204ENST00000507293 MAJINQ3KP22 176 aa7.28□□□□□ -1.24
HMGCS1-204ENST00000507293 PRSS3P2Q8NHM4 247 aa7.28□□□□□ -1.24
HMGCS1-204ENST00000507293 PMCHP20382 165 aa7.27□□□□□ -1.25
HMGCS1-204ENST00000507293 CEBPGP53567 150 aa7.27□□□□□ -1.25
HMGCS1-204ENST00000507293 OR5A1Q8NGJ0 315 aa7.27□□□□□ -1.25
HMGCS1-204ENST00000507293 SMDT1Q9H4I9 107 aa7.27□□□□□ -1.25
HMGCS1-204ENST00000507293 A0A096LNI7 61 aa7.26□□□□□ -1.25
HMGCS1-204ENST00000507293 TRBV6-5A0A0K0K1A5 114 aa7.26□□□□□ -1.25
HMGCS1-204ENST00000507293 FAM231BA6NCW3 169 aa7.26□□□□□ -1.25
HMGCS1-204ENST00000507293 A8MWL6 223 aa7.26□□□□□ -1.25
HMGCS1-204ENST00000507293 I3L3M4 83 aa7.26□□□□□ -1.25
HMGCS1-204ENST00000507293 GAS8-AS1O95177 125 aa7.26□□□□□ -1.25
HMGCS1-204ENST00000507293 ZNF25P17030 456 aaPredicted RBP7.26□□□□□ -1.25
HMGCS1-204ENST00000507293 XCL1P47992 114 aa7.26□□□□□ -1.25
HMGCS1-204ENST00000507293 FAM231DQ6ZW35 169 aa7.26□□□□□ -1.25
HMGCS1-204ENST00000507293 STPG4Q8N801 248 aa7.26□□□□□ -1.25
HMGCS1-204ENST00000507293 BTF3L4Q96K17 158 aa7.26□□□□□ -1.25
HMGCS1-204ENST00000507293 TMEM242Q9NWH2 141 aa7.26□□□□□ -1.25
HMGCS1-204ENST00000507293 LINC00959A0A1B0GUT2 108 aa7.25□□□□□ -1.25
HMGCS1-204ENST00000507293 CCL25O15444 150 aa7.25□□□□□ -1.25
HMGCS1-204ENST00000507293 TSHBP01222 138 aa7.25□□□□□ -1.25
HMGCS1-204ENST00000507293 SRP19P09132 144 aaKnown RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms