RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 AP5S1Q9NUS5 200 aa9.36□□□□□ -0.91
HMGCS1-203ENST00000507004 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.35□□□□□ -0.91
HMGCS1-203ENST00000507004 H7C423 109 aa9.35□□□□□ -0.91
HMGCS1-203ENST00000507004 NDUFS6O75380 124 aaKnown RBP9.35□□□□□ -0.91
HMGCS1-203ENST00000507004 PRSS1P07477 247 aa9.35□□□□□ -0.91
HMGCS1-203ENST00000507004 KRTAP26-1Q6PEX3 210 aa9.35□□□□□ -0.91
HMGCS1-203ENST00000507004 CLPSL2Q6UWE3 100 aa9.35□□□□□ -0.91
HMGCS1-203ENST00000507004 FAM231DQ6ZW35 169 aa9.35□□□□□ -0.91
HMGCS1-203ENST00000507004 C20orf203Q8NBC4 194 aa9.35□□□□□ -0.91
HMGCS1-203ENST00000507004 A8MWL6 223 aa9.34□□□□□ -0.91
HMGCS1-203ENST00000507004 CNBPP62633 177 aaKnown RBP9.34□□□□□ -0.91
HMGCS1-203ENST00000507004 CT83Q5H943 113 aa9.34□□□□□ -0.91
HMGCS1-203ENST00000507004 CFAP161Q6P656 301 aa9.34□□□□□ -0.91
HMGCS1-203ENST00000507004 AKAP14Q86UN6 197 aa9.34□□□□□ -0.91
HMGCS1-203ENST00000507004 OCC1Q8TAD7 63 aa9.34□□□□□ -0.91
HMGCS1-203ENST00000507004 BORCS7Q96B45 105 aa9.34□□□□□ -0.91
HMGCS1-203ENST00000507004 HERC1Q15751 4861 aa9.33□□□□□ -0.92
HMGCS1-203ENST00000507004 SRRM2Q9UQ35 2752 aaKnown RBP9.33□□□□□ -0.92
HMGCS1-203ENST00000507004 GATCO43716 136 aaKnown RBP9.33□□□□□ -0.92
HMGCS1-203ENST00000507004 Q6ZNX1 250 aa9.33□□□□□ -0.92
HMGCS1-203ENST00000507004 RNASE7Q9H1E1 156 aaKnown RBP9.33□□□□□ -0.92
HMGCS1-203ENST00000507004 OXTP01178 125 aa9.32□□□□□ -0.92
HMGCS1-203ENST00000507004 MYCBP2O75592 4640 aa9.32□□□□□ -0.92
HMGCS1-203ENST00000507004 IGLV4-60A0A075B6I1 120 aa9.31□□□□□ -0.92
HMGCS1-203ENST00000507004 IGLV10-54A0A075B6I4 117 aa9.31□□□□□ -0.92
HMGCS1-203ENST00000507004 hDV102S1A0JD36 115 aa9.31□□□□□ -0.92
HMGCS1-203ENST00000507004 K7EN84 100 aa9.31□□□□□ -0.92
HMGCS1-203ENST00000507004 FOXA3P55318 350 aaPredicted RBP9.31□□□□□ -0.92
HMGCS1-203ENST00000507004 AMMECR1LQ6DCA0 310 aa9.31□□□□□ -0.92
HMGCS1-203ENST00000507004 GATD1Q8NB37 220 aa9.31□□□□□ -0.92
HMGCS1-203ENST00000507004 LYPD6BQ8NI32 183 aa9.31□□□□□ -0.92
HMGCS1-203ENST00000507004 RNF185Q96GF1 192 aa9.31□□□□□ -0.92
HMGCS1-203ENST00000507004 IGHV3-64A0A075B6Q5 118 aa9.3□□□□□ -0.92
HMGCS1-203ENST00000507004 APCSP02743 223 aa9.3□□□□□ -0.92
HMGCS1-203ENST00000507004 ZNF25P17030 456 aaPredicted RBP9.3□□□□□ -0.92
HMGCS1-203ENST00000507004 RPL37AP61513 92 aaKnown RBP9.3□□□□□ -0.92
HMGCS1-203ENST00000507004 SDIM1Q6ZPB5 146 aa9.3□□□□□ -0.92
HMGCS1-203ENST00000507004 FAM231BA6NCW3 169 aa9.29□□□□□ -0.92
HMGCS1-203ENST00000507004 GTSF1Q8WW33 167 aa9.29□□□□□ -0.92
HMGCS1-203ENST00000507004 GFRA4Q9GZZ7 299 aa9.29□□□□□ -0.92
HMGCS1-203ENST00000507004 PKIGQ9Y2B9 76 aa9.29□□□□□ -0.92
HMGCS1-203ENST00000507004 TRBV6-5A0A0K0K1A5 114 aa9.28□□□□□ -0.92
HMGCS1-203ENST00000507004 SDHAF1A6NFY7 115 aa9.28□□□□□ -0.92
HMGCS1-203ENST00000507004 KRTAP10-4P60372 401 aaPredicted RBP9.28□□□□□ -0.92
HMGCS1-203ENST00000507004 CIRBPQ14011 172 aaKnown RBP9.28□□□□□ -0.92
HMGCS1-203ENST00000507004 ALKAL2Q6UX46 152 aa9.28□□□□□ -0.92
HMGCS1-203ENST00000507004 BTF3L4Q96K17 158 aa9.28□□□□□ -0.92
HMGCS1-203ENST00000507004 I3L3M4 83 aa9.27□□□□□ -0.93
HMGCS1-203ENST00000507004 SERTAD4-AS1Q5TG53 156 aa9.27□□□□□ -0.93
HMGCS1-203ENST00000507004 TMEM101Q96IK0 257 aa9.27□□□□□ -0.93
HMGCS1-203ENST00000507004 EIF5A2Q9GZV4 153 aaKnown RBP9.27□□□□□ -0.93
HMGCS1-203ENST00000507004 TRAV26-2A0A0B4J265 109 aa9.26□□□□□ -0.93
HMGCS1-203ENST00000507004 A0A1B0GUT8 65 aa9.26□□□□□ -0.93
HMGCS1-203ENST00000507004 PPP1R17O96001 155 aa9.26□□□□□ -0.93
HMGCS1-203ENST00000507004 PMCHP20382 165 aa9.26□□□□□ -0.93
HMGCS1-203ENST00000507004 RNASEKQ6P5S7 137 aaKnown RBP9.26□□□□□ -0.93
HMGCS1-203ENST00000507004 TSKUQ8WUA8 353 aa9.26□□□□□ -0.93
HMGCS1-203ENST00000507004 SMIM7Q9BQ49 75 aa9.26□□□□□ -0.93
HMGCS1-203ENST00000507004 OSTCQ9NRP0 149 aa9.26□□□□□ -0.93
HMGCS1-203ENST00000507004 GAGE12HA6NDE8 117 aa9.25□□□□□ -0.93
HMGCS1-203ENST00000507004 FGF6P10767 208 aa9.25□□□□□ -0.93
HMGCS1-203ENST00000507004 SMAGPQ0VAQ4 97 aa9.25□□□□□ -0.93
HMGCS1-203ENST00000507004 RPL39LQ96EH5 51 aaKnown RBP9.25□□□□□ -0.93
HMGCS1-203ENST00000507004 DPH3Q96FX2 82 aa9.25□□□□□ -0.93
HMGCS1-203ENST00000507004 MRAP2Q96G30 205 aa9.25□□□□□ -0.93
HMGCS1-203ENST00000507004 TMEM191AQ9H0A3 160 aa9.25□□□□□ -0.93
HMGCS1-203ENST00000507004 ST20Q9HBF5 79 aa9.25□□□□□ -0.93
HMGCS1-203ENST00000507004 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.25□□□□□ -0.93
HMGCS1-203ENST00000507004 ZNF727A8MUV8 499 aa9.24□□□□□ -0.93
HMGCS1-203ENST00000507004 RPS10P46783 165 aaKnown RBP9.24□□□□□ -0.93
HMGCS1-203ENST00000507004 CEBPGP53567 150 aa9.24□□□□□ -0.93
HMGCS1-203ENST00000507004 LINC01551Q86U37 167 aa9.24□□□□□ -0.93
HMGCS1-203ENST00000507004 OR5A1Q8NGJ0 315 aa9.24□□□□□ -0.93
HMGCS1-203ENST00000507004 CHCHD10Q8WYQ3 142 aaPredicted RBP9.24□□□□□ -0.93
HMGCS1-203ENST00000507004 HIGD1CA8MV81 97 aa9.23□□□□□ -0.93
HMGCS1-203ENST00000507004 RIGQ13278 110 aa9.23□□□□□ -0.93
HMGCS1-203ENST00000507004 FAM74A3Q4VXF1 159 aa9.23□□□□□ -0.93
HMGCS1-203ENST00000507004 GVQW2A0A096LPI5 108 aaPredicted RBP9.22□□□□□ -0.93
HMGCS1-203ENST00000507004 IGKV3OR2-268A0A0C4DH90 116 aa9.22□□□□□ -0.93
HMGCS1-203ENST00000507004 ESDP10768 282 aa9.22□□□□□ -0.93
HMGCS1-203ENST00000507004 C15orf56Q8N910 161 aa9.22□□□□□ -0.93
HMGCS1-203ENST00000507004 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.21□□□□□ -0.94
HMGCS1-203ENST00000507004 TRBV27A0A0K0K1C4 114 aa9.21□□□□□ -0.94
HMGCS1-203ENST00000507004 IGKV2-29A2NJV5 120 aaPredicted RBP9.21□□□□□ -0.94
HMGCS1-203ENST00000507004 SPACA4Q8TDM5 124 aa9.21□□□□□ -0.94
HMGCS1-203ENST00000507004 VCYO14598 125 aa9.2□□□□□ -0.94
HMGCS1-203ENST00000507004 CCL25O15444 150 aa9.2□□□□□ -0.94
HMGCS1-203ENST00000507004 SRP19P09132 144 aaKnown RBP9.2□□□□□ -0.94
HMGCS1-203ENST00000507004 POLR2KP53803 58 aaKnown RBP9.2□□□□□ -0.94
HMGCS1-203ENST00000507004 SS18Q15532 418 aa9.2□□□□□ -0.94
HMGCS1-203ENST00000507004 Q6ZRU5 148 aa9.2□□□□□ -0.94
HMGCS1-203ENST00000507004 MRPL52Q86TS9 123 aaKnown RBP9.2□□□□□ -0.94
HMGCS1-203ENST00000507004 C7orf33Q8WU49 177 aa9.2□□□□□ -0.94
HMGCS1-203ENST00000507004 LINC00474Q9P2X8 69 aa9.2□□□□□ -0.94
HMGCS1-203ENST00000507004 hCG_2014768A0A024R1R8 64 aa9.19□□□□□ -0.94
HMGCS1-203ENST00000507004 A0A087WYN8 130 aa9.19□□□□□ -0.94
HMGCS1-203ENST00000507004 IGHV1-58A0A0C4DH39 117 aa9.19□□□□□ -0.94
HMGCS1-203ENST00000507004 C7orf77A4D0Y5 90 aa9.19□□□□□ -0.94
HMGCS1-203ENST00000507004 PPP1R2P9O14990 202 aa9.19□□□□□ -0.94
HMGCS1-203ENST00000507004 SLPIP03973 132 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 373.2 ms