RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 LINC00528Q8N1L1 170 aa5.8□□□□□ -1.48
PDGFC-205ENST00000506880 TMEM18Q96B42 140 aa5.8□□□□□ -1.48
PDGFC-205ENST00000506880 RNF185Q96GF1 192 aa5.8□□□□□ -1.48
PDGFC-205ENST00000506880 KIR2DL4Q99706 377 aa5.8□□□□□ -1.48
PDGFC-205ENST00000506880 RPS10P5Q9NQ39 176 aa5.8□□□□□ -1.48
PDGFC-205ENST00000506880 VPS13DQ5THJ4 4388 aa5.79□□□□□ -1.48
PDGFC-205ENST00000506880 TRAV8-3A0A0A6YYJ7 113 aa5.79□□□□□ -1.48
PDGFC-205ENST00000506880 MUC21A0A0G2JKD1 596 aa5.79□□□□□ -1.48
PDGFC-205ENST00000506880 MUC21A0A140T8X8 626 aa5.79□□□□□ -1.48
PDGFC-205ENST00000506880 SDHAF1A6NFY7 115 aa5.79□□□□□ -1.48
PDGFC-205ENST00000506880 CCL25O15444 150 aa5.79□□□□□ -1.48
PDGFC-205ENST00000506880 CAMPP49913 170 aa5.79□□□□□ -1.48
PDGFC-205ENST00000506880 AMN1Q8IY45 258 aa5.79□□□□□ -1.48
PDGFC-205ENST00000506880 RMI2Q96E14 147 aa5.79□□□□□ -1.48
PDGFC-205ENST00000506880 TMEM70Q9BUB7 260 aa5.79□□□□□ -1.48
PDGFC-205ENST00000506880 SMCO4Q9NRQ5 59 aa5.79□□□□□ -1.48
PDGFC-205ENST00000506880 CSDC2Q9Y534 153 aaKnown RBP5.79□□□□□ -1.48
PDGFC-205ENST00000506880 KMT2AQ03164 3969 aa5.79□□□□□ -1.48
PDGFC-205ENST00000506880 A0A087WX48 190 aa5.78□□□□□ -1.48
PDGFC-205ENST00000506880 LOC100131303A0A0U1RQF7 123 aa5.78□□□□□ -1.48
PDGFC-205ENST00000506880 PMCHP20382 165 aa5.78□□□□□ -1.48
PDGFC-205ENST00000506880 MRPL51Q4U2R6 128 aaKnown RBP5.78□□□□□ -1.48
PDGFC-205ENST00000506880 MRPL54Q6P161 138 aaKnown RBP5.78□□□□□ -1.48
PDGFC-205ENST00000506880 NIT1Q86X76 327 aa5.78□□□□□ -1.48
PDGFC-205ENST00000506880 NRACQ8N912 160 aa5.78□□□□□ -1.48
PDGFC-205ENST00000506880 TMEM243Q9BU79 118 aa5.78□□□□□ -1.48
PDGFC-205ENST00000506880 TM2D2Q9BX73 214 aa5.78□□□□□ -1.48
PDGFC-205ENST00000506880 NXT2Q9NPJ8 142 aaKnown RBP5.78□□□□□ -1.48
PDGFC-205ENST00000506880 IBA57-AS1B1ANH7 110 aa5.77□□□□□ -1.49
PDGFC-205ENST00000506880 APCSP02743 223 aa5.77□□□□□ -1.49
PDGFC-205ENST00000506880 C1orf134Q5TEV5 83 aa5.77□□□□□ -1.49
PDGFC-205ENST00000506880 TMEM136Q6ZRR5 245 aa5.77□□□□□ -1.49
PDGFC-205ENST00000506880 MRPL52Q86TS9 123 aaKnown RBP5.77□□□□□ -1.49
PDGFC-205ENST00000506880 TIMM21Q9BVV7 248 aa5.77□□□□□ -1.49
PDGFC-205ENST00000506880 TRAV8-4A0A0B4J246 113 aa5.76□□□□□ -1.49
PDGFC-205ENST00000506880 D6R8Y8 96 aa5.76□□□□□ -1.49
PDGFC-205ENST00000506880 UBE2L6O14933 153 aa5.76□□□□□ -1.49
PDGFC-205ENST00000506880 TNFRSF6BO95407 300 aa5.76□□□□□ -1.49
PDGFC-205ENST00000506880 S100A1P23297 94 aa5.76□□□□□ -1.49
PDGFC-205ENST00000506880 AMTP48728 403 aa5.76□□□□□ -1.49
PDGFC-205ENST00000506880 SSTP61278 116 aa5.76□□□□□ -1.49
PDGFC-205ENST00000506880 ATRAIDQ6UW56 229 aa5.76□□□□□ -1.49
PDGFC-205ENST00000506880 C6orf223Q8N319 242 aa5.76□□□□□ -1.49
PDGFC-205ENST00000506880 PRELID3AQ96N28 172 aa5.76□□□□□ -1.49
PDGFC-205ENST00000506880 SMIM2Q9BVW6 85 aa5.76□□□□□ -1.49
PDGFC-205ENST00000506880 MAP1LC3AQ9H492 121 aa5.76□□□□□ -1.49
PDGFC-205ENST00000506880 KMT2CQ8NEZ4 4911 aaKnown RBP5.76□□□□□ -1.49
PDGFC-205ENST00000506880 RYR3Q15413 4870 aa5.75□□□□□ -1.49
PDGFC-205ENST00000506880 ESDP10768 282 aa5.75□□□□□ -1.49
PDGFC-205ENST00000506880 FCER1GP30273 86 aa5.75□□□□□ -1.49
PDGFC-205ENST00000506880 MIAQ16674 131 aa5.75□□□□□ -1.49
PDGFC-205ENST00000506880 ORMDL2Q53FV1 153 aa5.75□□□□□ -1.49
PDGFC-205ENST00000506880 CHCHD5Q9BSY4 110 aa5.75□□□□□ -1.49
PDGFC-205ENST00000506880 SACSQ9NZJ4 4579 aa5.74□□□□□ -1.49
PDGFC-205ENST00000506880 TRAV26-2A0A0B4J265 109 aa5.74□□□□□ -1.49
PDGFC-205ENST00000506880 LINC01546A6NGU7 62 aa5.74□□□□□ -1.49
PDGFC-205ENST00000506880 RAB5AP20339 215 aa5.74□□□□□ -1.49
PDGFC-205ENST00000506880 RAB5BP61020 215 aa5.74□□□□□ -1.49
PDGFC-205ENST00000506880 PAPPA-AS1Q5QFB9 102 aa5.74□□□□□ -1.49
PDGFC-205ENST00000506880 NTM-AS1Q6ZSK4 140 aa5.74□□□□□ -1.49
PDGFC-205ENST00000506880 WFDC10BQ8IUB3 73 aa5.74□□□□□ -1.49
PDGFC-205ENST00000506880 Q8N8P6 123 aa5.74□□□□□ -1.49
PDGFC-205ENST00000506880 RPL39LQ96EH5 51 aaKnown RBP5.74□□□□□ -1.49
PDGFC-205ENST00000506880 TMEM101Q96IK0 257 aa5.74□□□□□ -1.49
PDGFC-205ENST00000506880 KRTAP4-7Q9BYR0 210 aa5.74□□□□□ -1.49
PDGFC-205ENST00000506880 SPANXA1Q9NS26 97 aa5.74□□□□□ -1.49
PDGFC-205ENST00000506880 PRR34Q9NV39 138 aa5.74□□□□□ -1.49
PDGFC-205ENST00000506880 EREGO14944 169 aa5.73□□□□□ -1.49
PDGFC-205ENST00000506880 SLC7A5P1Q8MH63 180 aa5.73□□□□□ -1.49
PDGFC-205ENST00000506880 YPEL4Q96NS1 127 aa5.73□□□□□ -1.49
PDGFC-205ENST00000506880 Q9UF83 564 aa5.73□□□□□ -1.49
PDGFC-205ENST00000506880 PYGO1Q9Y3Y4 419 aa5.73□□□□□ -1.49
PDGFC-205ENST00000506880 TMEM262E9PQX1 116 aa5.72□□□□□ -1.49
PDGFC-205ENST00000506880 TSHBP01222 138 aa5.72□□□□□ -1.49
PDGFC-205ENST00000506880 CRPP02741 224 aa5.72□□□□□ -1.49
PDGFC-205ENST00000506880 RPS10P46783 165 aaKnown RBP5.72□□□□□ -1.49
PDGFC-205ENST00000506880 MRPS36P82909 103 aaKnown RBP5.72□□□□□ -1.49
PDGFC-205ENST00000506880 C14orf177Q52M58 125 aa5.72□□□□□ -1.49
PDGFC-205ENST00000506880 AMMECR1LQ6DCA0 310 aa5.72□□□□□ -1.49
PDGFC-205ENST00000506880 C20orf203Q8NBC4 194 aa5.72□□□□□ -1.49
PDGFC-205ENST00000506880 MRPL18Q9H0U6 180 aaKnown RBP5.72□□□□□ -1.49
PDGFC-205ENST00000506880 TRAPPC1Q9Y5R8 145 aa5.72□□□□□ -1.49
PDGFC-205ENST00000506880 IGLV2-18A0A075B6J9 118 aa5.71□□□□□ -1.5
PDGFC-205ENST00000506880 NPYP01303 97 aa5.71□□□□□ -1.5
PDGFC-205ENST00000506880 RBX1P62877 108 aa5.71□□□□□ -1.5
PDGFC-205ENST00000506880 FABP9Q0Z7S8 132 aa5.71□□□□□ -1.5
PDGFC-205ENST00000506880 CDPF1Q6NVV7 123 aa5.71□□□□□ -1.5
PDGFC-205ENST00000506880 KRTAP4-12Q9BQ66 201 aa5.71□□□□□ -1.5
PDGFC-205ENST00000506880 ALKBH7Q9BT30 221 aaPredicted RBP5.71□□□□□ -1.5
PDGFC-205ENST00000506880 KRTAP17-1Q9BYP8 105 aa5.71□□□□□ -1.5
PDGFC-205ENST00000506880 ANGP03950 147 aaKnown RBP5.7□□□□□ -1.5
PDGFC-205ENST00000506880 FGF6P10767 208 aa5.7□□□□□ -1.5
PDGFC-205ENST00000506880 MPV17L2Q567V2 206 aa5.7□□□□□ -1.5
PDGFC-205ENST00000506880 DGAT2L7PQ6IED9 249 aa5.7□□□□□ -1.5
PDGFC-205ENST00000506880 Q6ZRN7 208 aaPredicted RBP5.7□□□□□ -1.5
PDGFC-205ENST00000506880 OR5A1Q8NGJ0 315 aa5.7□□□□□ -1.5
PDGFC-205ENST00000506880 NTN5Q8WTR8 489 aaPredicted RBP5.7□□□□□ -1.5
PDGFC-205ENST00000506880 C1orf43Q9BWL3 253 aa5.7□□□□□ -1.5
PDGFC-205ENST00000506880 CYSLTR1Q9Y271 337 aa5.7□□□□□ -1.5
PDGFC-205ENST00000506880 IFI27P40305 119 aaPredicted RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms