RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 HLA-DMBP28068 263 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 SRIP30626 198 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 CKS2P33552 79 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 DEFB131AP59861 70 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 S100A12P80511 92 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 ERCC8Q13216 396 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 IQCJQ1A5X6 159 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 DEFB136Q30KP8 78 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 FAM104BQ5XKR9 115 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 MORN3Q6PF18 240 aaPredicted RBP1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 LYZL1Q6UWQ5 148 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 LINC00322Q6ZN03 302 aaPredicted RBP1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 TMEM61Q8N0U2 210 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 ORMDL3Q8N138 153 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 TMEM256Q8N2U0 113 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 ZFAND2AQ8N6M9 145 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 C3orf56Q8N813 242 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 GATD1Q8NB37 220 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 Q8TAT8 98 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 TMEM158Q8WZ71 300 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 PTH2Q96A98 100 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 MRAP2Q96G30 205 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 AP1S3Q96PC3 154 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 LINC00467Q9BRT7 94 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 TMEM208Q9BTX3 173 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 SAMD10Q9BYL1 202 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 TMEM191AQ9H0A3 160 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 NXT2Q9NPJ8 142 aaKnown RBP1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 HSPB8Q9UJY1 196 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 GOLT1BQ9Y3E0 138 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 HLA-DRB4X5D2U9 266 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 DIDO1Q9BTC0 2240 aaKnown RBP1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 HIVEP3Q5T1R4 2406 aa1.56□□□□□ -2.16
TOPBP1-205ENST00000506779 USF3Q68DE3 2245 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 ABCA4P78363 2273 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 ICE1Q9Y2F5 2266 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 CCDC168Q8NDH2 2452 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 TMSB15BA0A087X1C1 80 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 KIR2DL5BA0A0G2JN68 375 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 KIR2DL5BA0A0G2JPC4 375 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 C20orf202A1L168 122 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 GRIFINA4D1Z8 144 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 SMIM9A6NGZ8 99 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 A8MTW9 85 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 A8MWV9 139 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 F6UB75 175 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 H3BMM0 161 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 H7C1H1 209 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 M0R381 172 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 SNAI2O43623 268 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 ZNF324O75467 553 aaPredicted RBP1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 ZNF705DP0CH99 300 aaPredicted RBP1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 ZNF705BP0CI00 300 aaPredicted RBP1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 GZMBP10144 247 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 FABP4P15090 132 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 ZNF80P51504 273 aaPredicted RBP1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 SLAQ13239 276 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 KIAA0087Q14695 138 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 PMCHL1Q16048 86 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 SPINK13Q1W4C9 94 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 C12orf54Q6X4T0 127 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 FA2HQ7L5A8 372 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 NIT1Q86X76 327 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 KIR2DL5AQ8N109 375 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 HIST3H2BBQ8N257 126 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 DEFB125Q8N687 156 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 WFDC9Q8NEX5 89 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 OR10D4PQ8NGN7 298 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 OR10AG1Q8NH19 301 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 KIR2DL5BQ8NHK3 375 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 PRELID3AQ96N28 172 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 LINC01587Q99440 93 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 HIST1H2BLQ99880 126 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 C20orf78Q9BR46 151 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 MAP1LC3CQ9BXW4 147 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 MAP1LC3AQ9H492 121 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 DPH3P1Q9H4G8 78 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 KLK12Q9UKR0 248 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 U3KQK5 164 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 TACC2O95359 2948 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 PKDREJQ9NTG1 2253 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 PCNX1Q96RV3 2341 aa1.55□□□□□ -2.16
TOPBP1-205ENST00000506779 CSMD1Q96PZ7 3565 aa1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 PDZD2O15018 2839 aa1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 NBPF19A0A087WUL8 3843 aa1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 HRNRQ86YZ3 2850 aaPredicted RBP1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 CELSR1Q9NYQ6 3014 aa1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 DOCK11Q5JSL3 2073 aa1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 ARID1AO14497 2285 aa1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 ROS1P08922 2347 aa1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 TRAV12-2A0A075B6T6 113 aa1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 RBMY1BA6NDE4 496 aaKnown RBP1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 RBMY1EA6NEQ0 496 aaKnown RBP1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 HSBP1L1C9JCN9 74 aa1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 D6R8Y8 96 aa1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 TSTD3H0UI37 97 aa1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 H3BVH4 76 aa1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 M0R2P5 195 aa1.54□□□□□ -2.16
TOPBP1-205ENST00000506779 M0R2Z0 102 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms