RNA–Protein interactions for RNA: ENST00000506626.1

SMAD1-205, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-205ENST00000506626 PDE6HQ13956 83 aa2.49□□□□□ -2.01
SMAD1-205ENST00000506626 SS18Q15532 418 aa2.49□□□□□ -2.01
SMAD1-205ENST00000506626 ECSCRQ19T08 205 aa2.49□□□□□ -2.01
SMAD1-205ENST00000506626 PHF5AQ7RTV0 110 aaKnown RBP2.49□□□□□ -2.01
SMAD1-205ENST00000506626 KLHL30-AS1Q8NEE0 82 aa2.49□□□□□ -2.01
SMAD1-205ENST00000506626 C11orf45Q8TAV5 145 aa2.49□□□□□ -2.01
SMAD1-205ENST00000506626 KLF14Q8TD94 323 aaPredicted RBP2.49□□□□□ -2.01
SMAD1-205ENST00000506626 TIMM17AQ99595 171 aa2.49□□□□□ -2.01
SMAD1-205ENST00000506626 RPP25Q9BUL9 199 aaKnown RBP2.49□□□□□ -2.01
SMAD1-205ENST00000506626 FGF23Q9GZV9 251 aaPredicted RBP2.49□□□□□ -2.01
SMAD1-205ENST00000506626 C11orf68Q9H3H3 251 aaKnown RBP2.49□□□□□ -2.01
SMAD1-205ENST00000506626 ARHGAP32A7KAX9 2087 aa2.49□□□□□ -2.01
SMAD1-205ENST00000506626 DSCAML1Q8TD84 2053 aa2.48□□□□□ -2.01
SMAD1-205ENST00000506626 IGKV1D-37A0A075B6S9 117 aa2.48□□□□□ -2.01
SMAD1-205ENST00000506626 IGHV1OR15-9A0A0B4J2B8 117 aa2.48□□□□□ -2.01
SMAD1-205ENST00000506626 C8orf87E5RJ46 101 aa2.48□□□□□ -2.01
SMAD1-205ENST00000506626 F8WEM9 126 aa2.48□□□□□ -2.01
SMAD1-205ENST00000506626 ATP6V0E1O15342 81 aa2.48□□□□□ -2.01
SMAD1-205ENST00000506626 MIAQ16674 131 aa2.48□□□□□ -2.01
SMAD1-205ENST00000506626 C2orf66Q6UXQ4 117 aa2.48□□□□□ -2.01
SMAD1-205ENST00000506626 Q6ZVQ6 151 aa2.48□□□□□ -2.01
SMAD1-205ENST00000506626 LCA10Q71F78 164 aa2.48□□□□□ -2.01
SMAD1-205ENST00000506626 TMEM61Q8N0U2 210 aa2.48□□□□□ -2.01
SMAD1-205ENST00000506626 C6orf223Q8N319 242 aa2.48□□□□□ -2.01
SMAD1-205ENST00000506626 CLEC2BQ92478 149 aa2.48□□□□□ -2.01
SMAD1-205ENST00000506626 OBSCN-AS1Q96MR7 158 aa2.48□□□□□ -2.01
SMAD1-205ENST00000506626 LINC00474Q9P2X8 69 aa2.48□□□□□ -2.01
SMAD1-205ENST00000506626 SPRR3Q9UBC9 169 aa2.48□□□□□ -2.01
SMAD1-205ENST00000506626 PI4KAP42356 2102 aa2.48□□□□□ -2.01
SMAD1-205ENST00000506626 IGHV5-51A0A0C4DH38 117 aa2.47□□□□□ -2.01
SMAD1-205ENST00000506626 IGKV3D-7A0A0C4DH55 119 aa2.47□□□□□ -2.01
SMAD1-205ENST00000506626 SOCS3O14543 225 aa2.47□□□□□ -2.01
SMAD1-205ENST00000506626 ZNF73O43830 326 aaPredicted RBP2.47□□□□□ -2.01
SMAD1-205ENST00000506626 IGHV1-69P01742 117 aa2.47□□□□□ -2.01
SMAD1-205ENST00000506626 IGHV4-34P06331 123 aa2.47□□□□□ -2.01
SMAD1-205ENST00000506626 CD28P10747 220 aa2.47□□□□□ -2.01
SMAD1-205ENST00000506626 CD59P13987 128 aa2.47□□□□□ -2.01
SMAD1-205ENST00000506626 MIFP14174 115 aa2.47□□□□□ -2.01
SMAD1-205ENST00000506626 TSPEAR-AS2P59090 65 aa2.47□□□□□ -2.01
SMAD1-205ENST00000506626 ATP11AUNQ6ZP68 121 aa2.47□□□□□ -2.01
SMAD1-205ENST00000506626 Q6ZR54 194 aa2.47□□□□□ -2.01
SMAD1-205ENST00000506626 C17orf82Q86X59 251 aaPredicted RBP2.47□□□□□ -2.01
SMAD1-205ENST00000506626 C14orf178Q8N769 122 aaPredicted RBP2.47□□□□□ -2.01
SMAD1-205ENST00000506626 PRSS33Q8NF86 280 aa2.47□□□□□ -2.01
SMAD1-205ENST00000506626 NDUFA4L2Q9NRX3 87 aa2.47□□□□□ -2.01
SMAD1-205ENST00000506626 LINC00588Q9Y4M8 146 aa2.47□□□□□ -2.01
SMAD1-205ENST00000506626 PHLDA3Q9Y5J5 127 aa2.47□□□□□ -2.01
SMAD1-205ENST00000506626 PRR14LQ5THK1 2151 aa2.47□□□□□ -2.01
SMAD1-205ENST00000506626 PLXNB1O43157 2135 aa2.47□□□□□ -2.01
SMAD1-205ENST00000506626 E7EQL1 145 aa2.46□□□□□ -2.02
SMAD1-205ENST00000506626 E7EUB6 86 aa2.46□□□□□ -2.02
SMAD1-205ENST00000506626 TMEM256-PLSCR3K7ERE1 68 aa2.46□□□□□ -2.02
SMAD1-205ENST00000506626 M0R1W7 72 aa2.46□□□□□ -2.02
SMAD1-205ENST00000506626 RTL8CO15255 209 aa2.46□□□□□ -2.02
SMAD1-205ENST00000506626 RPS21P63220 83 aaKnown RBP2.46□□□□□ -2.02
SMAD1-205ENST00000506626 CXCL6P80162 114 aa2.46□□□□□ -2.02
SMAD1-205ENST00000506626 CIRBPQ14011 172 aaKnown RBP2.46□□□□□ -2.02
SMAD1-205ENST00000506626 UNQ9165/PRO28630Q6UXU0 137 aa2.46□□□□□ -2.02
SMAD1-205ENST00000506626 UBL5Q9BZL1 73 aa2.46□□□□□ -2.02
SMAD1-205ENST00000506626 ESM1Q9NQ30 184 aa2.46□□□□□ -2.02
SMAD1-205ENST00000506626 LINC00846Q9NV44 126 aa2.46□□□□□ -2.02
SMAD1-205ENST00000506626 CTSZQ9UBR2 303 aa2.46□□□□□ -2.02
SMAD1-205ENST00000506626 MALRD1Q5VYJ5 2156 aa2.46□□□□□ -2.02
SMAD1-205ENST00000506626 TNCP24821 2201 aa2.45□□□□□ -2.02
SMAD1-205ENST00000506626 PDE4DIPQ5VU43 2346 aa2.45□□□□□ -2.02
SMAD1-205ENST00000506626 DOCK10Q96BY6 2186 aa2.45□□□□□ -2.02
SMAD1-205ENST00000506626 TRAV23DV6A0A075B6W5 121 aa2.45□□□□□ -2.02
SMAD1-205ENST00000506626 A0A087WVE0 104 aa2.45□□□□□ -2.02
SMAD1-205ENST00000506626 A0A1W2PPR1 153 aa2.45□□□□□ -2.02
SMAD1-205ENST00000506626 KLLNB2CW77 178 aa2.45□□□□□ -2.02
SMAD1-205ENST00000506626 F6UB75 175 aa2.45□□□□□ -2.02
SMAD1-205ENST00000506626 JMJD7-PLA2G4BH0Y9G9 81 aa2.45□□□□□ -2.02
SMAD1-205ENST00000506626 H0YGX0 51 aa2.45□□□□□ -2.02
SMAD1-205ENST00000506626 H3BRN7 92 aa2.45□□□□□ -2.02
SMAD1-205ENST00000506626 FUSP35637 526 aaKnown RBP eCLIP2.45□□□□□ -2.02
SMAD1-205ENST00000506626 RPL28P46779 137 aaKnown RBP2.45□□□□□ -2.02
SMAD1-205ENST00000506626 UBE2AP49459 152 aa2.45□□□□□ -2.02
SMAD1-205ENST00000506626 C7orf65Q6ZTY9 151 aa2.45□□□□□ -2.02
SMAD1-205ENST00000506626 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.45□□□□□ -2.02
SMAD1-205ENST00000506626 TMEM167AQ8TBQ9 72 aa2.45□□□□□ -2.02
SMAD1-205ENST00000506626 C22orf24Q9Y442 160 aa2.45□□□□□ -2.02
SMAD1-205ENST00000506626 IGKV1D-17A0A075B6S4 117 aa2.44□□□□□ -2.02
SMAD1-205ENST00000506626 IGHV5-10-1A0A0J9YXX1 117 aa2.44□□□□□ -2.02
SMAD1-205ENST00000506626 IGKV3-15P01624 115 aa2.44□□□□□ -2.02
SMAD1-205ENST00000506626 TRBV12-3P01733 135 aa2.44□□□□□ -2.02
SMAD1-205ENST00000506626 RNASE4P34096 147 aaKnown RBP2.44□□□□□ -2.02
SMAD1-205ENST00000506626 RPL39P5Q59GN2 51 aa2.44□□□□□ -2.02
SMAD1-205ENST00000506626 ZNF833PQ6ZTB9 187 aa2.44□□□□□ -2.02
SMAD1-205ENST00000506626 DIRC1Q969H9 104 aa2.44□□□□□ -2.02
SMAD1-205ENST00000506626 CCL13Q99616 98 aa2.44□□□□□ -2.02
SMAD1-205ENST00000506626 BPESC1Q9GZL8 116 aa2.44□□□□□ -2.02
SMAD1-205ENST00000506626 CYP4F30PQ9H0H9 118 aa2.44□□□□□ -2.02
SMAD1-205ENST00000506626 MRPL36Q9P0J6 103 aaKnown RBP2.44□□□□□ -2.02
SMAD1-205ENST00000506626 IGHV1-18A0A0C4DH31 117 aa2.43□□□□□ -2.02
SMAD1-205ENST00000506626 TRBV7-4A0A0J9YYF1 115 aa2.43□□□□□ -2.02
SMAD1-205ENST00000506626 LOC100131303A0A0U1RQF7 123 aa2.43□□□□□ -2.02
SMAD1-205ENST00000506626 hDV103S1A0JD37 113 aa2.43□□□□□ -2.02
SMAD1-205ENST00000506626 SAA1P0DJI8 122 aaPredicted RBP2.43□□□□□ -2.02
SMAD1-205ENST00000506626 SAA2P0DJI9 122 aaPredicted RBP2.43□□□□□ -2.02
SMAD1-205ENST00000506626 CCL4P13236 92 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms