RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 BIRC6Q9NR09 4857 aa1.6□□□□□ -2.15
NEDD4-205ENST00000506154 KIF26BQ2KJY2 2108 aa1.6□□□□□ -2.15
NEDD4-205ENST00000506154 ZNF138P52744 262 aa1.6□□□□□ -2.15
NEDD4-205ENST00000506154 DEFB110Q30KQ9 67 aa1.6□□□□□ -2.15
NEDD4-205ENST00000506154 LYRM7Q5U5X0 104 aa1.6□□□□□ -2.15
NEDD4-205ENST00000506154 C6orf201Q7Z4U5 140 aa1.6□□□□□ -2.15
NEDD4-205ENST00000506154 LINC00167Q96N53 147 aa1.6□□□□□ -2.15
NEDD4-205ENST00000506154 KAAG1Q9UBP8 84 aa1.6□□□□□ -2.15
NEDD4-205ENST00000506154 H3BMM0 161 aa1.6□□□□□ -2.15
NEDD4-205ENST00000506154 TSPEAR-AS2P59090 65 aa1.6□□□□□ -2.15
NEDD4-205ENST00000506154 LINC00596Q86U02 117 aa1.6□□□□□ -2.15
NEDD4-205ENST00000506154 Q8N6K4 173 aa1.6□□□□□ -2.15
NEDD4-205ENST00000506154 OR8A1Q8NGG7 326 aa1.6□□□□□ -2.15
NEDD4-205ENST00000506154 UBE2WQ96B02 151 aa1.6□□□□□ -2.15
NEDD4-205ENST00000506154 NIPBLQ6KC79 2804 aaeCLIP1.6□□□□□ -2.15
NEDD4-205ENST00000506154 PCLOQ9Y6V0 5065 aa1.6□□□□□ -2.15
NEDD4-205ENST00000506154 GPR179Q6PRD1 2367 aa1.6□□□□□ -2.15
NEDD4-205ENST00000506154 M0R135 149 aa1.6□□□□□ -2.15
NEDD4-205ENST00000506154 GNRH2O43555 120 aa1.6□□□□□ -2.15
NEDD4-205ENST00000506154 IL4P05112 153 aa1.6□□□□□ -2.15
NEDD4-205ENST00000506154 FXYD3Q14802 87 aa1.6□□□□□ -2.15
NEDD4-205ENST00000506154 FAM19A3Q7Z5A8 133 aa1.6□□□□□ -2.15
NEDD4-205ENST00000506154 DCTN5Q9BTE1 182 aa1.6□□□□□ -2.15
NEDD4-205ENST00000506154 BPESC1Q9GZL8 116 aa1.6□□□□□ -2.15
NEDD4-205ENST00000506154 DYSFO75923 2080 aa1.6□□□□□ -2.15
NEDD4-205ENST00000506154 DNAJC9-AS1A6NH13 148 aa1.59□□□□□ -2.15
NEDD4-205ENST00000506154 GNLYP22749 145 aa1.59□□□□□ -2.15
NEDD4-205ENST00000506154 ZNF80P51504 273 aaPredicted RBP1.59□□□□□ -2.15
NEDD4-205ENST00000506154 CMC4P56277 68 aaPredicted RBP1.59□□□□□ -2.15
NEDD4-205ENST00000506154 PATE2Q6UY27 113 aa1.59□□□□□ -2.15
NEDD4-205ENST00000506154 DIRC1Q969H9 104 aa1.59□□□□□ -2.15
NEDD4-205ENST00000506154 MED12LQ86YW9 2145 aa1.59□□□□□ -2.15
NEDD4-205ENST00000506154 APOBP04114 4563 aaKnown RBP1.59□□□□□ -2.15
NEDD4-205ENST00000506154 F5P12259 2224 aa1.59□□□□□ -2.15
NEDD4-205ENST00000506154 SDHAF1A6NFY7 115 aa1.59□□□□□ -2.15
NEDD4-205ENST00000506154 IFI27P40305 119 aaPredicted RBP1.59□□□□□ -2.15
NEDD4-205ENST00000506154 RPS27P42677 84 aaKnown RBP1.59□□□□□ -2.15
NEDD4-205ENST00000506154 LINC00205P59089 165 aa1.59□□□□□ -2.15
NEDD4-205ENST00000506154 VSIG2Q96IQ7 327 aa1.59□□□□□ -2.15
NEDD4-205ENST00000506154 TMEM243Q9BU79 118 aa1.59□□□□□ -2.15
NEDD4-205ENST00000506154 ODF3BA8MYP8 253 aa1.59□□□□□ -2.15
NEDD4-205ENST00000506154 ASB16-AS1Q495Z4 193 aa1.59□□□□□ -2.15
NEDD4-205ENST00000506154 FAM223AQ8IWN6 122 aa1.59□□□□□ -2.15
NEDD4-205ENST00000506154 Q8N1X5 172 aa1.59□□□□□ -2.15
NEDD4-205ENST00000506154 C14orf178Q8N769 122 aaPredicted RBP1.59□□□□□ -2.15
NEDD4-205ENST00000506154 FDCSPQ8NFU4 85 aa1.59□□□□□ -2.15
NEDD4-205ENST00000506154 RPL36ALQ969Q0 106 aaKnown RBP1.59□□□□□ -2.15
NEDD4-205ENST00000506154 TMEM167BQ9NRX6 74 aa1.59□□□□□ -2.15
NEDD4-205ENST00000506154 PRO1854Q9UHT4 67 aa1.59□□□□□ -2.15
NEDD4-205ENST00000506154 TENM1Q9UKZ4 2725 aa1.59□□□□□ -2.16
NEDD4-205ENST00000506154 LRP1BQ9NZR2 4599 aa1.59□□□□□ -2.16
NEDD4-205ENST00000506154 CR1P17927 2039 aa1.59□□□□□ -2.16
NEDD4-205ENST00000506154 IGKV1D-37A0A075B6S9 117 aa1.59□□□□□ -2.16
NEDD4-205ENST00000506154 TRAV8-2A0A0B4J237 113 aa1.59□□□□□ -2.16
NEDD4-205ENST00000506154 LY6HO94772 140 aa1.59□□□□□ -2.16
NEDD4-205ENST00000506154 P01737 135 aa1.59□□□□□ -2.16
NEDD4-205ENST00000506154 TFF1P04155 84 aa1.59□□□□□ -2.16
NEDD4-205ENST00000506154 TCRAP04437 139 aa1.59□□□□□ -2.16
NEDD4-205ENST00000506154 COX7A1P24310 79 aa1.59□□□□□ -2.16
NEDD4-205ENST00000506154 CRIP1P50238 77 aa1.59□□□□□ -2.16
NEDD4-205ENST00000506154 MIC13Q5XKP0 118 aa1.59□□□□□ -2.16
NEDD4-205ENST00000506154 COL7A1Q02388 2944 aa1.59□□□□□ -2.16
NEDD4-205ENST00000506154 TRAV8-1A0A0A6YYK1 113 aa1.59□□□□□ -2.16
NEDD4-205ENST00000506154 IQCF6A8MYZ5 107 aa1.59□□□□□ -2.16
NEDD4-205ENST00000506154 PLNP26678 52 aa1.59□□□□□ -2.16
NEDD4-205ENST00000506154 NPC2P61916 151 aa1.59□□□□□ -2.16
NEDD4-205ENST00000506154 ITLN2Q8WWU7 325 aaPredicted RBP1.59□□□□□ -2.16
NEDD4-205ENST00000506154 CHCHD10Q8WYQ3 142 aaPredicted RBP1.59□□□□□ -2.16
NEDD4-205ENST00000506154 CCL28Q9NRJ3 127 aa1.59□□□□□ -2.16
NEDD4-205ENST00000506154 ZNF355PQ9NSJ1 428 aa1.59□□□□□ -2.16
NEDD4-205ENST00000506154 ASCC3Q8N3C0 2202 aaKnown RBP1.59□□□□□ -2.16
NEDD4-205ENST00000506154 TRAV3A0A0B4J244 114 aa1.58□□□□□ -2.16
NEDD4-205ENST00000506154 TRBV27A0A0K0K1C4 114 aa1.58□□□□□ -2.16
NEDD4-205ENST00000506154 hDV103S1A0JD37 113 aa1.58□□□□□ -2.16
NEDD4-205ENST00000506154 PGPA6NDG6 321 aa1.58□□□□□ -2.16
NEDD4-205ENST00000506154 IGKV2-30P06310 120 aa1.58□□□□□ -2.16
NEDD4-205ENST00000506154 C6orf99Q4VX62 202 aa1.58□□□□□ -2.16
NEDD4-205ENST00000506154 RUSC1-AS1Q66K80 236 aa1.58□□□□□ -2.16
NEDD4-205ENST00000506154 ADM2Q7Z4H4 148 aa1.58□□□□□ -2.16
NEDD4-205ENST00000506154 CYP4F30PQ9H0H9 118 aa1.58□□□□□ -2.16
NEDD4-205ENST00000506154 VWFP04275 2813 aa1.58□□□□□ -2.16
NEDD4-205ENST00000506154 IGHV4-61A0A0C4DH41 118 aa1.58□□□□□ -2.16
NEDD4-205ENST00000506154 IGHV4-59P01825 116 aa1.58□□□□□ -2.16
NEDD4-205ENST00000506154 IGHV4-38-2P0DP08 117 aa1.58□□□□□ -2.16
NEDD4-205ENST00000506154 IGHV1-2P23083 117 aa1.58□□□□□ -2.16
NEDD4-205ENST00000506154 ATP5EP2Q5VTU8 51 aa1.58□□□□□ -2.16
NEDD4-205ENST00000506154 HMGN2P46Q86SG4 172 aa1.58□□□□□ -2.16
NEDD4-205ENST00000506154 Q86TA4 180 aa1.58□□□□□ -2.16
NEDD4-205ENST00000506154 HSPG2P98160 4391 aa1.58□□□□□ -2.16
NEDD4-205ENST00000506154 SCN3AQ9NY46 2000 aa1.58□□□□□ -2.16
NEDD4-205ENST00000506154 C12orf77C9JDV5 145 aa1.58□□□□□ -2.16
NEDD4-205ENST00000506154 F8VRH5 84 aa1.58□□□□□ -2.16
NEDD4-205ENST00000506154 CD24P25063 80 aa1.58□□□□□ -2.16
NEDD4-205ENST00000506154 RPL28P46779 137 aaKnown RBP1.58□□□□□ -2.16
NEDD4-205ENST00000506154 C11orf68Q9H3H3 251 aaKnown RBP1.58□□□□□ -2.16
NEDD4-205ENST00000506154 TRGV3P03979 118 aa1.58□□□□□ -2.16
NEDD4-205ENST00000506154 ADAMTSL4-AS1Q5T5F5 129 aa1.58□□□□□ -2.16
NEDD4-205ENST00000506154 ZNF833PQ6ZTB9 187 aa1.58□□□□□ -2.16
NEDD4-205ENST00000506154 LINC00337Q8N6G1 96 aa1.58□□□□□ -2.16
NEDD4-205ENST00000506154 TYMSOSQ8TAI1 123 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms