RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 PMVKQ15126 192 aa5.12□□□□□ -1.59
NUP54-204ENST00000506098 TWIST1Q15672 202 aa5.12□□□□□ -1.59
NUP54-204ENST00000506098 FAM222AQ5U5X8 452 aa5.12□□□□□ -1.59
NUP54-204ENST00000506098 Q6ZTI0 123 aa5.12□□□□□ -1.59
NUP54-204ENST00000506098 POM121L12Q8N7R1 296 aa5.12□□□□□ -1.59
NUP54-204ENST00000506098 ZNRF2Q8NHG8 242 aa5.12□□□□□ -1.59
NUP54-204ENST00000506098 TMEM191AQ9H0A3 160 aa5.12□□□□□ -1.59
NUP54-204ENST00000506098 CELA1Q9UNI1 258 aa5.12□□□□□ -1.59
NUP54-204ENST00000506098 TRGV1A0A0A0MS02 117 aa5.11□□□□□ -1.59
NUP54-204ENST00000506098 A0A0J9YWU9 116 aa5.11□□□□□ -1.59
NUP54-204ENST00000506098 F8W1H4 67 aa5.11□□□□□ -1.59
NUP54-204ENST00000506098 H3BRM9 83 aa5.11□□□□□ -1.59
NUP54-204ENST00000506098 DEFB4AO15263 64 aa5.11□□□□□ -1.59
NUP54-204ENST00000506098 HINT1P49773 126 aaPredicted RBP5.11□□□□□ -1.59
NUP54-204ENST00000506098 EMP1P54849 157 aa5.11□□□□□ -1.59
NUP54-204ENST00000506098 LINC00315P59091 139 aa5.11□□□□□ -1.59
NUP54-204ENST00000506098 Q0VG73 95 aa5.11□□□□□ -1.59
NUP54-204ENST00000506098 CFAP126Q5VTH2 177 aa5.11□□□□□ -1.59
NUP54-204ENST00000506098 Q6Q795 121 aa5.11□□□□□ -1.59
NUP54-204ENST00000506098 ZFP2Q6ZN57 461 aa5.11□□□□□ -1.59
NUP54-204ENST00000506098 ATP6V0E2Q8NHE4 81 aa5.11□□□□□ -1.59
NUP54-204ENST00000506098 AP1S3Q96PC3 154 aa5.11□□□□□ -1.59
NUP54-204ENST00000506098 GNB1LQ9BYB4 327 aa5.11□□□□□ -1.59
NUP54-204ENST00000506098 DPH3P1Q9H4G8 78 aa5.11□□□□□ -1.59
NUP54-204ENST00000506098 JPT2Q9H910 190 aa5.11□□□□□ -1.59
NUP54-204ENST00000506098 DNAH7Q8WXX0 4024 aa5.11□□□□□ -1.59
NUP54-204ENST00000506098 C9orf118A6NHY6 69 aa5.1□□□□□ -1.59
NUP54-204ENST00000506098 B5MCH6 92 aa5.1□□□□□ -1.59
NUP54-204ENST00000506098 F5H768 121 aa5.1□□□□□ -1.59
NUP54-204ENST00000506098 RHODO00212 210 aa5.1□□□□□ -1.59
NUP54-204ENST00000506098 DAD1P61803 113 aa5.1□□□□□ -1.59
NUP54-204ENST00000506098 TMEM136Q6ZRR5 245 aa5.1□□□□□ -1.59
NUP54-204ENST00000506098 ERASQ7Z444 233 aa5.1□□□□□ -1.59
NUP54-204ENST00000506098 EDA2RQ9HAV5 297 aa5.1□□□□□ -1.59
NUP54-204ENST00000506098 STAB2Q8WWQ8 2551 aa5.1□□□□□ -1.59
NUP54-204ENST00000506098 TRGV2A0A075B6R0 118 aa5.09□□□□□ -1.59
NUP54-204ENST00000506098 TRAV9-2A0A087WT02 112 aa5.09□□□□□ -1.59
NUP54-204ENST00000506098 HLA-DQA1P01909 254 aa5.09□□□□□ -1.59
NUP54-204ENST00000506098 MT-ND6P03923 174 aa5.09□□□□□ -1.59
NUP54-204ENST00000506098 SRIP30626 198 aa5.09□□□□□ -1.59
NUP54-204ENST00000506098 CAMPP49913 170 aa5.09□□□□□ -1.59
NUP54-204ENST00000506098 C12orf74Q32Q52 190 aa5.09□□□□□ -1.59
NUP54-204ENST00000506098 BVES-AS1Q5T3Y7 98 aa5.09□□□□□ -1.59
NUP54-204ENST00000506098 FAM104BQ5XKR9 115 aa5.09□□□□□ -1.59
NUP54-204ENST00000506098 LINC00528Q8N1L1 170 aa5.09□□□□□ -1.59
NUP54-204ENST00000506098 C14orf178Q8N769 122 aaPredicted RBP5.09□□□□□ -1.59
NUP54-204ENST00000506098 C11orf45Q8TAV5 145 aa5.09□□□□□ -1.59
NUP54-204ENST00000506098 RNF185Q96GF1 192 aa5.09□□□□□ -1.59
NUP54-204ENST00000506098 U3KQK5 164 aa5.09□□□□□ -1.59
NUP54-204ENST00000506098 A0A087WWL8 130 aa5.08□□□□□ -1.6
NUP54-204ENST00000506098 J3KT08 172 aa5.08□□□□□ -1.6
NUP54-204ENST00000506098 IGHV3-53P01767 116 aa5.08□□□□□ -1.6
NUP54-204ENST00000506098 ATP5G1P05496 136 aa5.08□□□□□ -1.6
NUP54-204ENST00000506098 DEFB130BP0DP73 79 aa5.08□□□□□ -1.6
NUP54-204ENST00000506098 DEFB130AP0DP74 79 aa5.08□□□□□ -1.6
NUP54-204ENST00000506098 GATA1P15976 413 aaPredicted RBP5.08□□□□□ -1.6
NUP54-204ENST00000506098 FHL2Q14192 279 aa5.08□□□□□ -1.6
NUP54-204ENST00000506098 C6orf226Q5I0X4 101 aa5.08□□□□□ -1.6
NUP54-204ENST00000506098 AMN1Q8IY45 258 aa5.08□□□□□ -1.6
NUP54-204ENST00000506098 DYNC2H1Q8NCM8 4307 aaKnown RBP5.07□□□□□ -1.6
NUP54-204ENST00000506098 TRBV6-4A0A1B0GX49 114 aa5.07□□□□□ -1.6
NUP54-204ENST00000506098 TNFRSF6BO95407 300 aa5.07□□□□□ -1.6
NUP54-204ENST00000506098 MRPL51Q4U2R6 128 aaKnown RBP5.07□□□□□ -1.6
NUP54-204ENST00000506098 FAM74A4Q5TZK3 123 aa5.07□□□□□ -1.6
NUP54-204ENST00000506098 Q8N976 141 aa5.07□□□□□ -1.6
NUP54-204ENST00000506098 PPDPFQ9H3Y8 114 aa5.07□□□□□ -1.6
NUP54-204ENST00000506098 MAP1LC3AQ9H492 121 aa5.07□□□□□ -1.6
NUP54-204ENST00000506098 FBN3Q75N90 2809 aa5.07□□□□□ -1.6
NUP54-204ENST00000506098 TGP01266 2768 aa5.07□□□□□ -1.6
NUP54-204ENST00000506098 TRAV8-6A0A0B4J262 113 aa5.06□□□□□ -1.6
NUP54-204ENST00000506098 TRGV4A0A0C4DH28 118 aa5.06□□□□□ -1.6
NUP54-204ENST00000506098 TMEM262E9PQX1 116 aa5.06□□□□□ -1.6
NUP54-204ENST00000506098 M0QY20 66 aa5.06□□□□□ -1.6
NUP54-204ENST00000506098 APCSP02743 223 aa5.06□□□□□ -1.6
NUP54-204ENST00000506098 SPINK8P0C7L1 97 aa5.06□□□□□ -1.6
NUP54-204ENST00000506098 PMCHP20382 165 aa5.06□□□□□ -1.6
NUP54-204ENST00000506098 NANOS2P60321 138 aaKnown RBP5.06□□□□□ -1.6
NUP54-204ENST00000506098 ZNF56Q15929 161 aa5.06□□□□□ -1.6
NUP54-204ENST00000506098 OR10J3Q5JRS4 329 aa5.06□□□□□ -1.6
NUP54-204ENST00000506098 SUMO4Q6EEV6 95 aa5.06□□□□□ -1.6
NUP54-204ENST00000506098 Q6ZSN1 163 aa5.06□□□□□ -1.6
NUP54-204ENST00000506098 Q6ZTC4 211 aa5.06□□□□□ -1.6
NUP54-204ENST00000506098 MRPL18Q9H0U6 180 aaKnown RBP5.06□□□□□ -1.6
NUP54-204ENST00000506098 PRO0255Q9UI72 69 aa5.06□□□□□ -1.6
NUP54-204ENST00000506098 TRAPPC1Q9Y5R8 145 aa5.06□□□□□ -1.6
NUP54-204ENST00000506098 CSMD3Q7Z407 3707 aa5.06□□□□□ -1.6
NUP54-204ENST00000506098 IGHV3-73A0A0B4J1V6 119 aa5.05□□□□□ -1.6
NUP54-204ENST00000506098 TRAV10A0A0B4J240 114 aa5.05□□□□□ -1.6
NUP54-204ENST00000506098 TRBV10-1A0A0K0K1A3 114 aa5.05□□□□□ -1.6
NUP54-204ENST00000506098 TRBV6-5A0A0K0K1A5 114 aa5.05□□□□□ -1.6
NUP54-204ENST00000506098 F5H697 171 aa5.05□□□□□ -1.6
NUP54-204ENST00000506098 H3BNG1 76 aa5.05□□□□□ -1.6
NUP54-204ENST00000506098 H7C1H1 209 aa5.05□□□□□ -1.6
NUP54-204ENST00000506098 K7EQD1 137 aa5.05□□□□□ -1.6
NUP54-204ENST00000506098 PPP1R17O96001 155 aa5.05□□□□□ -1.6
NUP54-204ENST00000506098 MGPP08493 103 aa5.05□□□□□ -1.6
NUP54-204ENST00000506098 CKS2P33552 79 aa5.05□□□□□ -1.6
NUP54-204ENST00000506098 SLC25A29Q8N8R3 303 aa5.05□□□□□ -1.6
NUP54-204ENST00000506098 NRACQ8N912 160 aa5.05□□□□□ -1.6
NUP54-204ENST00000506098 C18orf32Q8TCD1 76 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms