RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 CEND1Q8N111 149 aa8.16□□□□□ -1.1
NFKB1-205ENST00000505458 TP73-AS1Q9UF72 201 aa8.16□□□□□ -1.1
NFKB1-205ENST00000505458 CSNK1G2-AS1Q8NCQ2 148 aa8.16□□□□□ -1.1
NFKB1-205ENST00000505458 TRBV6-4A0A1B0GX49 114 aa8.16□□□□□ -1.1
NFKB1-205ENST00000505458 H7C423 109 aa8.16□□□□□ -1.1
NFKB1-205ENST00000505458 SMIM13P0DJ93 91 aa8.16□□□□□ -1.1
NFKB1-205ENST00000505458 WNK1Q9H4A3 2382 aa8.15□□□□□ -1.1
NFKB1-205ENST00000505458 ZNF815PA8K554 130 aa8.15□□□□□ -1.1
NFKB1-205ENST00000505458 LEPROTO15243 131 aa8.15□□□□□ -1.1
NFKB1-205ENST00000505458 GIG44P09565 113 aaPredicted RBP8.15□□□□□ -1.1
NFKB1-205ENST00000505458 VAMP3Q15836 100 aa8.15□□□□□ -1.1
NFKB1-205ENST00000505458 TMEM170BQ5T4T1 132 aa8.15□□□□□ -1.1
NFKB1-205ENST00000505458 KIR2DL5BQ8NHK3 375 aa8.15□□□□□ -1.1
NFKB1-205ENST00000505458 C9orf118A6NHY6 69 aa8.15□□□□□ -1.1
NFKB1-205ENST00000505458 RPL35AP18077 110 aaKnown RBP8.15□□□□□ -1.1
NFKB1-205ENST00000505458 PTTG1IPP53801 180 aa8.15□□□□□ -1.1
NFKB1-205ENST00000505458 HIST2H2BDQ6DRA6 164 aa8.15□□□□□ -1.1
NFKB1-205ENST00000505458 CHCHD7Q9BUK0 85 aa8.15□□□□□ -1.1
NFKB1-205ENST00000505458 CSDC2Q9Y534 153 aaKnown RBP8.15□□□□□ -1.1
NFKB1-205ENST00000505458 MTORP42345 2549 aa8.15□□□□□ -1.11
NFKB1-205ENST00000505458 LGALS3P17931 250 aaKnown RBP8.15□□□□□ -1.11
NFKB1-205ENST00000505458 GCSHP23434 173 aa8.15□□□□□ -1.11
NFKB1-205ENST00000505458 KRTAP10-3P60369 221 aa8.15□□□□□ -1.11
NFKB1-205ENST00000505458 GTSF1LQ9H1H1 148 aa8.15□□□□□ -1.11
NFKB1-205ENST00000505458 GTF2H5Q6ZYL4 71 aa8.14□□□□□ -1.11
NFKB1-205ENST00000505458 HIST1H4GQ99525 98 aa8.14□□□□□ -1.11
NFKB1-205ENST00000505458 CITED1Q99966 193 aa8.14□□□□□ -1.11
NFKB1-205ENST00000505458 TCTAP57738 103 aa8.14□□□□□ -1.11
NFKB1-205ENST00000505458 SCGB1D4Q6XE38 83 aa8.14□□□□□ -1.11
NFKB1-205ENST00000505458 SPANXB1Q9NS25 103 aaPredicted RBP8.14□□□□□ -1.11
NFKB1-205ENST00000505458 UBE2D4Q9Y2X8 147 aa8.14□□□□□ -1.11
NFKB1-205ENST00000505458 TRGV2A0A075B6R0 118 aa8.14□□□□□ -1.11
NFKB1-205ENST00000505458 TINCRA0A1B0GVN0 87 aa8.14□□□□□ -1.11
NFKB1-205ENST00000505458 TMEM223A0PJW6 202 aa8.14□□□□□ -1.11
NFKB1-205ENST00000505458 NOP10Q9NPE3 64 aaKnown RBP8.14□□□□□ -1.11
NFKB1-205ENST00000505458 APOC4P55056 127 aa8.13□□□□□ -1.11
NFKB1-205ENST00000505458 DGAT2L7PQ6IED9 249 aa8.13□□□□□ -1.11
NFKB1-205ENST00000505458 Q6ZTI0 123 aa8.13□□□□□ -1.11
NFKB1-205ENST00000505458 Q6ZSN1 163 aa8.13□□□□□ -1.11
NFKB1-205ENST00000505458 ANK3Q12955 4377 aaKnown RBP8.13□□□□□ -1.11
NFKB1-205ENST00000505458 UBE2D3P61077 147 aa8.13□□□□□ -1.11
NFKB1-205ENST00000505458 UBE2D2P62837 147 aa8.13□□□□□ -1.11
NFKB1-205ENST00000505458 ZNRF2Q8NHG8 242 aa8.13□□□□□ -1.11
NFKB1-205ENST00000505458 CSMD2Q7Z408 3487 aa8.12□□□□□ -1.11
NFKB1-205ENST00000505458 J3QQQ9 107 aa8.12□□□□□ -1.11
NFKB1-205ENST00000505458 MAPKAPK5-AS1Q8N8E1 139 aa8.12□□□□□ -1.11
NFKB1-205ENST00000505458 PLAC8L1A1L4L8 177 aa8.12□□□□□ -1.11
NFKB1-205ENST00000505458 ZNF22P17026 224 aaPredicted RBP8.12□□□□□ -1.11
NFKB1-205ENST00000505458 WIPF1O43516 503 aa8.12□□□□□ -1.11
NFKB1-205ENST00000505458 ZNF479Q96JC4 524 aa8.12□□□□□ -1.11
NFKB1-205ENST00000505458 TIRAPP58753 221 aa8.11□□□□□ -1.11
NFKB1-205ENST00000505458 ZFHX3Q15911 3703 aa8.11□□□□□ -1.11
NFKB1-205ENST00000505458 LINC00612Q8N6U2 182 aa8.11□□□□□ -1.11
NFKB1-205ENST00000505458 PRM2P04554 102 aa8.11□□□□□ -1.11
NFKB1-205ENST00000505458 FAM19A3Q7Z5A8 133 aa8.11□□□□□ -1.11
NFKB1-205ENST00000505458 OR5A1Q8NGJ0 315 aa8.11□□□□□ -1.11
NFKB1-205ENST00000505458 TRGV4A0A0C4DH28 118 aa8.1□□□□□ -1.11
NFKB1-205ENST00000505458 TTTY13Q9BZ97 58 aa8.1□□□□□ -1.11
NFKB1-205ENST00000505458 GCN1Q92616 2671 aaKnown RBP8.1□□□□□ -1.11
NFKB1-205ENST00000505458 A0A1B0GWB2 263 aa8.1□□□□□ -1.11
NFKB1-205ENST00000505458 LYRM9A8MSI8 78 aa8.1□□□□□ -1.11
NFKB1-205ENST00000505458 FABP2P12104 132 aa8.1□□□□□ -1.11
NFKB1-205ENST00000505458 SLC25A29Q8N8R3 303 aa8.1□□□□□ -1.11
NFKB1-205ENST00000505458 WFDC9Q8NEX5 89 aa8.1□□□□□ -1.11
NFKB1-205ENST00000505458 WFDC10AQ9H1F0 79 aa8.1□□□□□ -1.11
NFKB1-205ENST00000505458 GEMIN7Q9H840 131 aaKnown RBP8.1□□□□□ -1.11
NFKB1-205ENST00000505458 FXYD2P54710 66 aa8.09□□□□□ -1.11
NFKB1-205ENST00000505458 HERVK_113P63121 156 aa8.09□□□□□ -1.11
NFKB1-205ENST00000505458 GAGE12BA1L429 117 aa8.09□□□□□ -1.11
NFKB1-205ENST00000505458 GAGE7O76087 117 aa8.09□□□□□ -1.11
NFKB1-205ENST00000505458 GAGE12FP0CL80 117 aa8.09□□□□□ -1.11
NFKB1-205ENST00000505458 GAGE12GP0CL81 117 aa8.09□□□□□ -1.11
NFKB1-205ENST00000505458 GAGE12IP0CL82 117 aa8.09□□□□□ -1.11
NFKB1-205ENST00000505458 SRSF9Q13242 221 aaKnown RBP eCLIP8.09□□□□□ -1.11
NFKB1-205ENST00000505458 TMEM101Q96IK0 257 aa8.09□□□□□ -1.11
NFKB1-205ENST00000505458 TMEM243Q9BU79 118 aa8.09□□□□□ -1.11
NFKB1-205ENST00000505458 TMEM238C9JI98 176 aa8.09□□□□□ -1.11
NFKB1-205ENST00000505458 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.09□□□□□ -1.11
NFKB1-205ENST00000505458 IGLV5-45A0A087WSX0 123 aa8.08□□□□□ -1.12
NFKB1-205ENST00000505458 A0A0J9YXV3 536 aa8.08□□□□□ -1.12
NFKB1-205ENST00000505458 UBE2L6O14933 153 aa8.08□□□□□ -1.12
NFKB1-205ENST00000505458 LYRM7Q5U5X0 104 aa8.08□□□□□ -1.12
NFKB1-205ENST00000505458 PHLDA1Q8WV24 401 aaPredicted RBP8.08□□□□□ -1.12
NFKB1-205ENST00000505458 Q6ZVH6 145 aa8.08□□□□□ -1.12
NFKB1-205ENST00000505458 IGHV1-58A0A0C4DH39 117 aa8.08□□□□□ -1.12
NFKB1-205ENST00000505458 A0A0J9YY99 117 aa8.08□□□□□ -1.12
NFKB1-205ENST00000505458 GAGE10A6NGK3 116 aa8.08□□□□□ -1.12
NFKB1-205ENST00000505458 A0A1W2PPM0 123 aa8.07□□□□□ -1.12
NFKB1-205ENST00000505458 UBE2D1P51668 147 aa8.07□□□□□ -1.12
NFKB1-205ENST00000505458 SBSPONQ8IVN8 264 aa8.07□□□□□ -1.12
NFKB1-205ENST00000505458 NHP2Q9NX24 153 aaKnown RBP8.07□□□□□ -1.12
NFKB1-205ENST00000505458 NBPF19A0A087WUL8 3843 aa8.07□□□□□ -1.12
NFKB1-205ENST00000505458 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.07□□□□□ -1.12
NFKB1-205ENST00000505458 IGKV2-29A2NJV5 120 aaPredicted RBP8.07□□□□□ -1.12
NFKB1-205ENST00000505458 EMP1P54849 157 aa8.07□□□□□ -1.12
NFKB1-205ENST00000505458 Q6ZUT4 128 aa8.07□□□□□ -1.12
NFKB1-205ENST00000505458 OPRPNQ99935 248 aaPredicted RBP8.07□□□□□ -1.12
NFKB1-205ENST00000505458 HECTD1Q9ULT8 2610 aa8.07□□□□□ -1.12
NFKB1-205ENST00000505458 K7EP34 96 aa8.07□□□□□ -1.12
NFKB1-205ENST00000505458 AMMECR1LQ6DCA0 310 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms