RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 RPL37AP61513 92 aaKnown RBP12.86□□□□□ -0.35
UBE2D3-220ENST00000505307 CNBPP62633 177 aaKnown RBP12.86□□□□□ -0.35
UBE2D3-220ENST00000505307 COTL1Q14019 142 aa12.86□□□□□ -0.35
UBE2D3-220ENST00000505307 TWIST1Q15672 202 aa12.85□□□□□ -0.35
UBE2D3-220ENST00000505307 SDIM1Q6ZPB5 146 aa12.85□□□□□ -0.35
UBE2D3-220ENST00000505307 AP5S1Q9NUS5 200 aa12.85□□□□□ -0.35
UBE2D3-220ENST00000505307 IGLV4-60A0A075B6I1 120 aa12.84□□□□□ -0.35
UBE2D3-220ENST00000505307 AMTP48728 403 aa12.84□□□□□ -0.35
UBE2D3-220ENST00000505307 RPP21Q9H633 154 aaKnown RBP12.84□□□□□ -0.35
UBE2D3-220ENST00000505307 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.83□□□□□ -0.36
UBE2D3-220ENST00000505307 hDV102S1A0JD36 115 aa12.83□□□□□ -0.36
UBE2D3-220ENST00000505307 SERTAD4-AS1Q5TG53 156 aa12.83□□□□□ -0.36
UBE2D3-220ENST00000505307 SMIM15Q7Z3B0 74 aa12.82□□□□□ -0.36
UBE2D3-220ENST00000505307 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.82□□□□□ -0.36
UBE2D3-220ENST00000505307 TEX261Q6UWH6 196 aa12.81□□□□□ -0.36
UBE2D3-220ENST00000505307 OCC1Q8TAD7 63 aa12.81□□□□□ -0.36
UBE2D3-220ENST00000505307 GFRA4Q9GZZ7 299 aa12.81□□□□□ -0.36
UBE2D3-220ENST00000505307 NCR2O95944 276 aa12.8□□□□□ -0.36
UBE2D3-220ENST00000505307 CIRBPQ14011 172 aaKnown RBP12.8□□□□□ -0.36
UBE2D3-220ENST00000505307 CFAP161Q6P656 301 aa12.8□□□□□ -0.36
UBE2D3-220ENST00000505307 GATD1Q8NB37 220 aa12.8□□□□□ -0.36
UBE2D3-220ENST00000505307 RNASE7Q9H1E1 156 aaKnown RBP12.8□□□□□ -0.36
UBE2D3-220ENST00000505307 LRP1Q07954 4544 aaKnown RBP12.8□□□□□ -0.36
UBE2D3-220ENST00000505307 IGHV3-64A0A075B6Q5 118 aa12.79□□□□□ -0.36
UBE2D3-220ENST00000505307 K7EN84 100 aa12.79□□□□□ -0.36
UBE2D3-220ENST00000505307 RNF185Q96GF1 192 aa12.79□□□□□ -0.36
UBE2D3-220ENST00000505307 TMEM250H0YL14 139 aa12.78□□□□□ -0.36
UBE2D3-220ENST00000505307 H7C423 109 aa12.78□□□□□ -0.36
UBE2D3-220ENST00000505307 BLOC1S1P78537 153 aa12.77□□□□□ -0.37
UBE2D3-220ENST00000505307 A8MWL6 223 aa12.76□□□□□ -0.37
UBE2D3-220ENST00000505307 PANO1I0J062 215 aa12.76□□□□□ -0.37
UBE2D3-220ENST00000505307 AMMECR1LQ6DCA0 310 aa12.76□□□□□ -0.37
UBE2D3-220ENST00000505307 FAM231DQ6ZW35 169 aa12.76□□□□□ -0.37
UBE2D3-220ENST00000505307 GTSF1Q8WW33 167 aa12.76□□□□□ -0.37
UBE2D3-220ENST00000505307 DPH3Q96FX2 82 aa12.76□□□□□ -0.37
UBE2D3-220ENST00000505307 TRAV26-2A0A0B4J265 109 aa12.75□□□□□ -0.37
UBE2D3-220ENST00000505307 GATCO43716 136 aaKnown RBP12.75□□□□□ -0.37
UBE2D3-220ENST00000505307 FAM210AQ96ND0 272 aa12.75□□□□□ -0.37
UBE2D3-220ENST00000505307 GAGE12HA6NDE8 117 aa12.74□□□□□ -0.37
UBE2D3-220ENST00000505307 APCSP02743 223 aa12.74□□□□□ -0.37
UBE2D3-220ENST00000505307 SLPIP03973 132 aa12.74□□□□□ -0.37
UBE2D3-220ENST00000505307 FAT3Q8TDW7 4589 aa12.74□□□□□ -0.37
UBE2D3-220ENST00000505307 SDHAF1A6NFY7 115 aa12.73□□□□□ -0.37
UBE2D3-220ENST00000505307 FOXA3P55318 350 aaPredicted RBP12.73□□□□□ -0.37
UBE2D3-220ENST00000505307 CT83Q5H943 113 aa12.73□□□□□ -0.37
UBE2D3-220ENST00000505307 Q6ZNX1 250 aa12.73□□□□□ -0.37
UBE2D3-220ENST00000505307 RPL39LQ96EH5 51 aaKnown RBP12.73□□□□□ -0.37
UBE2D3-220ENST00000505307 ZNF25P17030 456 aaPredicted RBP12.72□□□□□ -0.37
UBE2D3-220ENST00000505307 RNASEKQ6P5S7 137 aaKnown RBP12.72□□□□□ -0.37
UBE2D3-220ENST00000505307 C15orf56Q8N910 161 aa12.72□□□□□ -0.37
UBE2D3-220ENST00000505307 LYPD6BQ8NI32 183 aa12.72□□□□□ -0.37
UBE2D3-220ENST00000505307 BORCS7Q96B45 105 aa12.72□□□□□ -0.37
UBE2D3-220ENST00000505307 IGKV3OR2-268A0A0C4DH90 116 aa12.71□□□□□ -0.37
UBE2D3-220ENST00000505307 TRBV6-5A0A0K0K1A5 114 aa12.71□□□□□ -0.37
UBE2D3-220ENST00000505307 FGF6P10767 208 aa12.71□□□□□ -0.37
UBE2D3-220ENST00000505307 RPS10P46783 165 aaKnown RBP12.71□□□□□ -0.37
UBE2D3-220ENST00000505307 SPACA4Q8TDM5 124 aa12.71□□□□□ -0.37
UBE2D3-220ENST00000505307 CHCHD10Q8WYQ3 142 aaPredicted RBP12.71□□□□□ -0.37
UBE2D3-220ENST00000505307 A0A087WYN8 130 aa12.7□□□□□ -0.38
UBE2D3-220ENST00000505307 I3L3M4 83 aa12.7□□□□□ -0.38
UBE2D3-220ENST00000505307 NDUFS6O75380 124 aaKnown RBP12.7□□□□□ -0.38
UBE2D3-220ENST00000505307 HNRNPA3P51991 378 aaKnown RBP12.7□□□□□ -0.38
UBE2D3-220ENST00000505307 Q6ZRU5 148 aa12.7□□□□□ -0.38
UBE2D3-220ENST00000505307 AKAP14Q86UN6 197 aa12.7□□□□□ -0.38
UBE2D3-220ENST00000505307 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.69□□□□□ -0.38
UBE2D3-220ENST00000505307 IGKV2-29A2NJV5 120 aaPredicted RBP12.69□□□□□ -0.38
UBE2D3-220ENST00000505307 PMCHP20382 165 aa12.69□□□□□ -0.38
UBE2D3-220ENST00000505307 ALKAL2Q6UX46 152 aa12.69□□□□□ -0.38
UBE2D3-220ENST00000505307 BTF3L4Q96K17 158 aa12.69□□□□□ -0.38
UBE2D3-220ENST00000505307 PLAC8Q9NZF1 115 aa12.69□□□□□ -0.38
UBE2D3-220ENST00000505307 HMCN2Q8NDA2 5059 aa12.69□□□□□ -0.38
UBE2D3-220ENST00000505307 OR5A1Q8NGJ0 315 aa12.68□□□□□ -0.38
UBE2D3-220ENST00000505307 TMEM101Q96IK0 257 aa12.68□□□□□ -0.38
UBE2D3-220ENST00000505307 GVQW2A0A096LPI5 108 aaPredicted RBP12.67□□□□□ -0.38
UBE2D3-220ENST00000505307 FAM231BA6NCW3 169 aa12.67□□□□□ -0.38
UBE2D3-220ENST00000505307 CHTF8P0CG12 524 aa12.67□□□□□ -0.38
UBE2D3-220ENST00000505307 ST20Q9HBF5 79 aa12.67□□□□□ -0.38
UBE2D3-220ENST00000505307 A0A1B0GUT8 65 aa12.66□□□□□ -0.38
UBE2D3-220ENST00000505307 CEBPGP53567 150 aa12.66□□□□□ -0.38
UBE2D3-220ENST00000505307 COX6A2Q02221 97 aa12.66□□□□□ -0.38
UBE2D3-220ENST00000505307 C7orf33Q8WU49 177 aa12.66□□□□□ -0.38
UBE2D3-220ENST00000505307 TSKUQ8WUA8 353 aa12.66□□□□□ -0.38
UBE2D3-220ENST00000505307 TMEM191AQ9H0A3 160 aa12.66□□□□□ -0.38
UBE2D3-220ENST00000505307 PKIGQ9Y2B9 76 aa12.66□□□□□ -0.38
UBE2D3-220ENST00000505307 PKHD1L1Q86WI1 4243 aa12.65□□□□□ -0.38
UBE2D3-220ENST00000505307 ESDP10768 282 aa12.65□□□□□ -0.38
UBE2D3-220ENST00000505307 HIGD2BQ4VC39 106 aa12.65□□□□□ -0.38
UBE2D3-220ENST00000505307 SMIM7Q9BQ49 75 aa12.65□□□□□ -0.38
UBE2D3-220ENST00000505307 PLA2G2DQ9UNK4 145 aa12.65□□□□□ -0.38
UBE2D3-220ENST00000505307 HIGD1CA8MV81 97 aa12.64□□□□□ -0.39
UBE2D3-220ENST00000505307 FOXI1Q12951 378 aa12.64□□□□□ -0.39
UBE2D3-220ENST00000505307 LINC01551Q86U37 167 aa12.64□□□□□ -0.39
UBE2D3-220ENST00000505307 MRAP2Q96G30 205 aa12.64□□□□□ -0.39
UBE2D3-220ENST00000505307 EIF5A2Q9GZV4 153 aaKnown RBP12.64□□□□□ -0.39
UBE2D3-220ENST00000505307 OSTCQ9NRP0 149 aa12.64□□□□□ -0.39
UBE2D3-220ENST00000505307 LINC00959A0A1B0GUT2 108 aa12.62□□□□□ -0.39
UBE2D3-220ENST00000505307 TSHBP01222 138 aa12.62□□□□□ -0.39
UBE2D3-220ENST00000505307 POLR2KP53803 58 aaKnown RBP12.62□□□□□ -0.39
UBE2D3-220ENST00000505307 MRPL52Q86TS9 123 aaKnown RBP12.62□□□□□ -0.39
UBE2D3-220ENST00000505307 PRSS3P2Q8NHM4 247 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms