RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 SIPA1L3O60292 1781 aaPredicted RBP0.26□□□□□ -2.37
UBE2D3-218ENST00000505009 TCHHQ07283 1943 aa0.26□□□□□ -2.37
UBE2D3-218ENST00000505009 IFT172Q9UG01 1749 aa0.25□□□□□ -2.37
UBE2D3-218ENST00000505009 MBD5Q9P267 1494 aa0.25□□□□□ -2.37
UBE2D3-218ENST00000505009 ZNF609O15014 1411 aa0.25□□□□□ -2.37
UBE2D3-218ENST00000505009 PPIP5K1Q6PFW1 1433 aa0.25□□□□□ -2.37
UBE2D3-218ENST00000505009 ROCK2O75116 1388 aaKnown RBP0.25□□□□□ -2.37
UBE2D3-218ENST00000505009 CTXND1A0A1B0GTU2 59 aa0.25□□□□□ -2.37
UBE2D3-218ENST00000505009 HCG22E2RYF7 251 aa0.25□□□□□ -2.37
UBE2D3-218ENST00000505009 PRH1P02810 166 aa0.25□□□□□ -2.37
UBE2D3-218ENST00000505009 BTG2P78543 158 aa0.25□□□□□ -2.37
UBE2D3-218ENST00000505009 SPAG11BQ08648 103 aa0.25□□□□□ -2.37
UBE2D3-218ENST00000505009 CATR1Q13166 79 aa0.25□□□□□ -2.37
UBE2D3-218ENST00000505009 CFAP126Q5VTH2 177 aa0.25□□□□□ -2.37
UBE2D3-218ENST00000505009 SPAG11AQ6PDA7 123 aa0.25□□□□□ -2.37
UBE2D3-218ENST00000505009 C8orf59Q8N0T1 100 aaPredicted RBP0.25□□□□□ -2.37
UBE2D3-218ENST00000505009 TTC9CQ8N5M4 171 aa0.25□□□□□ -2.37
UBE2D3-218ENST00000505009 MYOZ3Q8TDC0 251 aa0.25□□□□□ -2.37
UBE2D3-218ENST00000505009 SMR3AQ99954 134 aa0.25□□□□□ -2.37
UBE2D3-218ENST00000505009 WFDC6Q9BQY6 131 aa0.25□□□□□ -2.37
UBE2D3-218ENST00000505009 LENEPQ9Y5L5 61 aa0.25□□□□□ -2.37
UBE2D3-218ENST00000505009 V9GYH0 126 aa0.25□□□□□ -2.37
UBE2D3-218ENST00000505009 NAV2Q8IVL1 2488 aa0.25□□□□□ -2.37
UBE2D3-218ENST00000505009 FRAS1Q86XX4 4008 aa0.25□□□□□ -2.37
UBE2D3-218ENST00000505009 PATJQ8NI35 1801 aa0.24□□□□□ -2.37
UBE2D3-218ENST00000505009 PRDM2Q13029 1718 aa0.24□□□□□ -2.37
UBE2D3-218ENST00000505009 NALCNQ8IZF0 1738 aa0.24□□□□□ -2.37
UBE2D3-218ENST00000505009 ARAP2Q8WZ64 1704 aa0.24□□□□□ -2.37
UBE2D3-218ENST00000505009 RYR1P21817 5038 aa0.24□□□□□ -2.37
UBE2D3-218ENST00000505009 WDR7Q9Y4E6 1490 aa0.24□□□□□ -2.37
UBE2D3-218ENST00000505009 SMG6Q86US8 1419 aaKnown RBP0.24□□□□□ -2.37
UBE2D3-218ENST00000505009 A0A0D9SFI3 127 aa0.24□□□□□ -2.37
UBE2D3-218ENST00000505009 SPINK1P00995 79 aa0.24□□□□□ -2.37
UBE2D3-218ENST00000505009 APOC3P02656 99 aa0.24□□□□□ -2.37
UBE2D3-218ENST00000505009 SPINK8P0C7L1 97 aa0.24□□□□□ -2.37
UBE2D3-218ENST00000505009 PI4KAP42356 2102 aa0.24□□□□□ -2.37
UBE2D3-218ENST00000505009 ATP5EP56381 51 aaPredicted RBP0.24□□□□□ -2.37
UBE2D3-218ENST00000505009 TPPP2P59282 170 aa0.24□□□□□ -2.37
UBE2D3-218ENST00000505009 MRPS10P82664 201 aaKnown RBP0.24□□□□□ -2.37
UBE2D3-218ENST00000505009 COX17Q14061 63 aa0.24□□□□□ -2.37
UBE2D3-218ENST00000505009 Q5VV11 94 aa0.24□□□□□ -2.37
UBE2D3-218ENST00000505009 MRPL54Q6P161 138 aaKnown RBP0.24□□□□□ -2.37
UBE2D3-218ENST00000505009 Q8N8P6 123 aa0.24□□□□□ -2.37
UBE2D3-218ENST00000505009 LSM10Q969L4 123 aaKnown RBP0.24□□□□□ -2.37
UBE2D3-218ENST00000505009 TMEM203Q969S6 136 aa0.24□□□□□ -2.37
UBE2D3-218ENST00000505009 CYP4F30PQ9H0H9 118 aa0.24□□□□□ -2.37
UBE2D3-218ENST00000505009 BDP1A6H8Y1 2624 aa0.24□□□□□ -2.37
UBE2D3-218ENST00000505009 PTPRZ1P23471 2315 aaPredicted RBP0.24□□□□□ -2.37
UBE2D3-218ENST00000505009 GOLGA3Q08378 1498 aa0.23□□□□□ -2.37
UBE2D3-218ENST00000505009 CPSF1Q10570 1443 aaKnown RBP0.23□□□□□ -2.37
UBE2D3-218ENST00000505009 CACNA1HO95180 2353 aa0.23□□□□□ -2.37
UBE2D3-218ENST00000505009 LOC285095A0A1B0GVY8 99 aa0.23□□□□□ -2.37
UBE2D3-218ENST00000505009 FAM24AA6NFZ4 105 aa0.23□□□□□ -2.37
UBE2D3-218ENST00000505009 SSSCA1O60232 199 aa0.23□□□□□ -2.37
UBE2D3-218ENST00000505009 IFITM1P13164 125 aa0.23□□□□□ -2.37
UBE2D3-218ENST00000505009 GNG4P50150 75 aa0.23□□□□□ -2.37
UBE2D3-218ENST00000505009 CCL18P55774 89 aa0.23□□□□□ -2.37
UBE2D3-218ENST00000505009 C9orf153Q5TBE3 101 aa0.23□□□□□ -2.37
UBE2D3-218ENST00000505009 SVBPQ8N300 66 aa0.23□□□□□ -2.37
UBE2D3-218ENST00000505009 PP6455Q8WZ26 134 aa0.23□□□□□ -2.37
UBE2D3-218ENST00000505009 MGST2Q99735 147 aa0.23□□□□□ -2.37
UBE2D3-218ENST00000505009 DYNLRB1Q9NP97 96 aa0.23□□□□□ -2.37
UBE2D3-218ENST00000505009 SCN3BQ9NY72 215 aa0.23□□□□□ -2.37
UBE2D3-218ENST00000505009 UQCR10Q9UDW1 63 aa0.23□□□□□ -2.37
UBE2D3-218ENST00000505009 SPCS1Q9Y6A9 102 aa0.23□□□□□ -2.37
UBE2D3-218ENST00000505009 TNCP24821 2201 aa0.23□□□□□ -2.37
UBE2D3-218ENST00000505009 SSC5DA1L4H1 1573 aa0.23□□□□□ -2.37
UBE2D3-218ENST00000505009 MRC1P22897 1456 aa0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 BCL9LQ86UU0 1499 aa0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 DOCK1Q14185 1865 aa0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 WNK3Q9BYP7 1800 aa0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 STAB1Q9NY15 2570 aa0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 LRRC37A2A6NM11 1700 aa0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 CUL7Q14999 1698 aa0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 QRICH2Q9H0J4 1663 aa0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 TRAV22A0A0B4J277 110 aa0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 UBE2L5PA0A1B0GUS4 154 aa0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 A0A1B0GV90 55 aa0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 ZNF815PA8K554 130 aa0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 F6UZH7 168 aa0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 M0R135 149 aa0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 UQCR11O14957 56 aa0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 DLEU1O43261 78 aa0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 S100A1P23297 94 aa0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 UBE2L3P68036 154 aaKnown RBP0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 HAMPP81172 84 aa0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 Q5BKY6 102 aa0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 TMEM170BQ5T4T1 132 aa0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 GTF2H5Q6ZYL4 71 aa0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 SSBP3-AS1Q7Z2R9 100 aa0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 COMMD6Q7Z4G1 85 aa0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 C5orf38Q86SI9 138 aa0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 BAGE2Q86Y30 109 aa0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 CNFNQ9BYD5 112 aa0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 FAIMQ9NVQ4 179 aa0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 PRO0255Q9UI72 69 aa0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 GNG8Q9UK08 70 aa0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 ABCA12Q86UK0 2595 aa0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 A2ML1A8K2U0 1454 aa0.22□□□□□ -2.37
UBE2D3-218ENST00000505009 MYOM2P54296 1465 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms