RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 TSPOP30536 169 aa1.54□□□□□ -2.16
RFC1-209ENST00000504974 TCTAP57738 103 aa1.54□□□□□ -2.16
RFC1-209ENST00000504974 FXYD7P58549 80 aa1.54□□□□□ -2.16
RFC1-209ENST00000504974 TAS2R45P59539 299 aa1.54□□□□□ -2.16
RFC1-209ENST00000504974 DEFB1P60022 68 aa1.54□□□□□ -2.16
RFC1-209ENST00000504974 RHOBP62745 196 aa1.54□□□□□ -2.16
RFC1-209ENST00000504974 MEF2BQ02080 365 aaPredicted RBP1.54□□□□□ -2.16
RFC1-209ENST00000504974 HIST1H1AQ02539 215 aaPredicted RBP1.54□□□□□ -2.16
RFC1-209ENST00000504974 PDE6HQ13956 83 aa1.54□□□□□ -2.16
RFC1-209ENST00000504974 PSG3Q16557 428 aa1.54□□□□□ -2.16
RFC1-209ENST00000504974 SPINK13Q1W4C9 94 aa1.54□□□□□ -2.16
RFC1-209ENST00000504974 TMEM241Q24JQ0 296 aa1.54□□□□□ -2.16
RFC1-209ENST00000504974 RRN3P1Q2M238 152 aa1.54□□□□□ -2.16
RFC1-209ENST00000504974 RGS21Q2M5E4 152 aa1.54□□□□□ -2.16
RFC1-209ENST00000504974 LGALSLQ3ZCW2 172 aaPredicted RBP1.54□□□□□ -2.16
RFC1-209ENST00000504974 KHDC3LQ587J8 217 aa1.54□□□□□ -2.16
RFC1-209ENST00000504974 AMTNQ6UX39 209 aa1.54□□□□□ -2.16
RFC1-209ENST00000504974 PATE2Q6UY27 113 aa1.54□□□□□ -2.16
RFC1-209ENST00000504974 BAP18Q8IXM2 172 aa1.54□□□□□ -2.16
RFC1-209ENST00000504974 LINC00337Q8N6G1 96 aa1.54□□□□□ -2.16
RFC1-209ENST00000504974 OR8A1Q8NGG7 326 aa1.54□□□□□ -2.16
RFC1-209ENST00000504974 SCGB1C1Q8TD33 95 aa1.54□□□□□ -2.16
RFC1-209ENST00000504974 IGF2BP2-AS1Q96M15 143 aa1.54□□□□□ -2.16
RFC1-209ENST00000504974 ODF3Q96PU9 254 aa1.54□□□□□ -2.16
RFC1-209ENST00000504974 MRPL32Q9BYC8 188 aaKnown RBP1.54□□□□□ -2.16
RFC1-209ENST00000504974 PARD6GQ9BYG4 376 aaPredicted RBP1.54□□□□□ -2.16
RFC1-209ENST00000504974 SLC35B3Q9H1N7 401 aa1.54□□□□□ -2.16
RFC1-209ENST00000504974 MED28Q9H204 178 aa1.54□□□□□ -2.16
RFC1-209ENST00000504974 TMEM14CQ9P0S9 112 aa1.54□□□□□ -2.16
RFC1-209ENST00000504974 PRELID1Q9Y255 219 aa1.54□□□□□ -2.16
RFC1-209ENST00000504974 ALG5Q9Y673 324 aa1.54□□□□□ -2.16
RFC1-209ENST00000504974 PXMP4Q9Y6I8 212 aa1.54□□□□□ -2.16
RFC1-209ENST00000504974 HSPG2P98160 4391 aa1.54□□□□□ -2.16
RFC1-209ENST00000504974 TRAV12-2A0A075B6T6 113 aa1.53□□□□□ -2.16
RFC1-209ENST00000504974 FXYD6-FXYD2A0A087WZ82 144 aa1.53□□□□□ -2.16
RFC1-209ENST00000504974 DEFB131BA0A096LNP1 70 aa1.53□□□□□ -2.16
RFC1-209ENST00000504974 TRAV5A0A0B4J249 113 aa1.53□□□□□ -2.16
RFC1-209ENST00000504974 LOC389332A0A1B0GUA5 103 aa1.53□□□□□ -2.16
RFC1-209ENST00000504974 RBAKDNA6NC62 111 aa1.53□□□□□ -2.16
RFC1-209ENST00000504974 IGLL5B9A064 214 aa1.53□□□□□ -2.16
RFC1-209ENST00000504974 H3BQ15 152 aa1.53□□□□□ -2.16
RFC1-209ENST00000504974 H7BYZ3 331 aa1.53□□□□□ -2.16
RFC1-209ENST00000504974 M0R2N4 97 aa1.53□□□□□ -2.16
RFC1-209ENST00000504974 CRXO43186 299 aaPredicted RBP1.53□□□□□ -2.16
RFC1-209ENST00000504974 GATCO43716 136 aaKnown RBP1.53□□□□□ -2.16
RFC1-209ENST00000504974 SPART-AS1P0CW21 52 aa1.53□□□□□ -2.16
RFC1-209ENST00000504974 PYYP10082 97 aa1.53□□□□□ -2.16
RFC1-209ENST00000504974 HIST1H1EP10412 219 aaKnown RBP1.53□□□□□ -2.16
RFC1-209ENST00000504974 M6PRP20645 277 aa1.53□□□□□ -2.16
RFC1-209ENST00000504974 CSN1S1P47710 185 aa1.53□□□□□ -2.16
RFC1-209ENST00000504974 EMP1P54849 157 aa1.53□□□□□ -2.16
RFC1-209ENST00000504974 UBE2L3P68036 154 aaKnown RBP1.53□□□□□ -2.16
RFC1-209ENST00000504974 C12orf74Q32Q52 190 aa1.53□□□□□ -2.16
RFC1-209ENST00000504974 ACOT6Q3I5F7 207 aaPredicted RBP1.53□□□□□ -2.16
RFC1-209ENST00000504974 PDZD11Q5EBL8 140 aa1.53□□□□□ -2.16
RFC1-209ENST00000504974 MIR17HGQ75NE6 70 aa1.53□□□□□ -2.16
RFC1-209ENST00000504974 C1orf158Q8N1D5 194 aa1.53□□□□□ -2.16
RFC1-209ENST00000504974 TMEM263Q8WUH6 116 aaKnown RBP1.53□□□□□ -2.16
RFC1-209ENST00000504974 BLNKQ8WV28 456 aa1.53□□□□□ -2.16
RFC1-209ENST00000504974 FAM167A-AS1Q96KT0 104 aa1.53□□□□□ -2.16
RFC1-209ENST00000504974 AQP10Q96PS8 301 aa1.53□□□□□ -2.16
RFC1-209ENST00000504974 ANAPC13Q9BS18 74 aa1.53□□□□□ -2.16
RFC1-209ENST00000504974 PSMG3Q9BT73 122 aaPredicted RBP1.53□□□□□ -2.16
RFC1-209ENST00000504974 TMEM208Q9BTX3 173 aa1.53□□□□□ -2.16
RFC1-209ENST00000504974 MAP1LC3CQ9BXW4 147 aa1.53□□□□□ -2.16
RFC1-209ENST00000504974 SMIM3Q9BZL3 60 aa1.53□□□□□ -2.16
RFC1-209ENST00000504974 FUT9Q9Y231 359 aa1.53□□□□□ -2.16
RFC1-209ENST00000504974 TIMM9Q9Y5J7 89 aa1.53□□□□□ -2.16
RFC1-209ENST00000504974 ICOSQ9Y6W8 199 aa1.53□□□□□ -2.16
RFC1-209ENST00000504974 DNAH11Q96DT5 4516 aa1.53□□□□□ -2.16
RFC1-209ENST00000504974 DNAH17Q9UFH2 4485 aa1.53□□□□□ -2.16
RFC1-209ENST00000504974 DYNC1H1Q14204 4646 aaKnown RBP1.52□□□□□ -2.17
RFC1-209ENST00000504974 IGKV2-40A0A087WW87 121 aaPredicted RBP1.52□□□□□ -2.17
RFC1-209ENST00000504974 BORCS7-ASMTA0A0B4J1R7 106 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 C7orf71A4D174 169 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 K7ERS5 55 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 M0R3E3 92 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 IGKV2D-40P01614 121 aaPredicted RBP1.52□□□□□ -2.17
RFC1-209ENST00000504974 SLC25A5P05141 298 aaKnown RBP1.52□□□□□ -2.17
RFC1-209ENST00000504974 NMBP08949 121 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 OR10J4P0C629 311 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 NBEAP1P0C6P0 100 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 ARL14EPLP0DKL9 152 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 P0DMU3 169 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 FAM231AP0DMU4 169 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 FAM231CP0DMU5 169 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 PRB4P10163 310 aaPredicted RBP1.52□□□□□ -2.17
RFC1-209ENST00000504974 HTN1P15515 57 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 ATP6V0CP27449 155 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 CDC34P49427 236 aaPredicted RBP1.52□□□□□ -2.17
RFC1-209ENST00000504974 RAB2AP61019 212 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 DAD1P61803 113 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 SERF2P84101 59 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 FAM74A1Q5RGS3 127 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 TMEM78Q5T7P6 136 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 AMMECR1LQ6DCA0 310 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 ZNF767PQ75MW2 155 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 EXOC3-AS1Q8N2X6 119 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 C15orf53Q8NAA6 179 aa1.52□□□□□ -2.17
RFC1-209ENST00000504974 OR2T35Q8NGX2 323 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms