RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-255	ENST00000504927		I3L3M4	83 aa		13.8	□□□□□ -0.2
DDR1-255	ENST00000504927	ANG	P03950	147 aa	Known RBP	13.8	□□□□□ -0.2
DDR1-255	ENST00000504927	AMT	P48728	403 aa		13.8	□□□□□ -0.2
DDR1-255	ENST00000504927	HBB	P68871	147 aa		13.8	□□□□□ -0.2
DDR1-255	ENST00000504927	ATP5L2	Q7Z4Y8	100 aa		13.8	□□□□□ -0.2
DDR1-255	ENST00000504927	COMMD7	Q86VX2	200 aa		13.8	□□□□□ -0.2
DDR1-255	ENST00000504927	UBE2W	Q96B02	151 aa		13.8	□□□□□ -0.2
DDR1-255	ENST00000504927	DNAH5	Q8TE73	4624 aa		13.8	□□□□□ -0.2
DDR1-255	ENST00000504927		A0A1B0GUV1	79 aa		13.79	□□□□□ -0.2
DDR1-255	ENST00000504927	LINC00862	A6NCI5	91 aa		13.79	□□□□□ -0.2
DDR1-255	ENST00000504927	UBE2L6	O14933	153 aa		13.79	□□□□□ -0.2
DDR1-255	ENST00000504927	PMCH	P20382	165 aa		13.79	□□□□□ -0.2
DDR1-255	ENST00000504927	RBX1	P62877	108 aa		13.79	□□□□□ -0.2
DDR1-255	ENST00000504927	MRPL54	Q6P161	138 aa	Known RBP	13.79	□□□□□ -0.2
DDR1-255	ENST00000504927	SEC11C	Q9BY50	192 aa		13.79	□□□□□ -0.2
DDR1-255	ENST00000504927		A0A1B0GXF2	115 aa		13.78	□□□□□ -0.2
DDR1-255	ENST00000504927	GAS8-AS1	O95177	125 aa		13.78	□□□□□ -0.2
DDR1-255	ENST00000504927	CRP	P02741	224 aa		13.78	□□□□□ -0.2
DDR1-255	ENST00000504927		Q8N976	141 aa		13.78	□□□□□ -0.2
DDR1-255	ENST00000504927	LRCOL1	A6NCL2	159 aa		13.77	□□□□□ -0.21
DDR1-255	ENST00000504927	KRTAP10-2	P60368	255 aa		13.77	□□□□□ -0.21
DDR1-255	ENST00000504927	MRPL51	Q4U2R6	128 aa	Known RBP	13.77	□□□□□ -0.21
DDR1-255	ENST00000504927	CDPF1	Q6NVV7	123 aa		13.77	□□□□□ -0.21
DDR1-255	ENST00000504927	TMEM70	Q9BUB7	260 aa		13.77	□□□□□ -0.21
DDR1-255	ENST00000504927	RYR1	P21817	5038 aa		13.76	□□□□□ -0.21
DDR1-255	ENST00000504927	IGKV2D-24	A0A075B6R9	120 aa		13.76	□□□□□ -0.21
DDR1-255	ENST00000504927		H7C423	109 aa		13.76	□□□□□ -0.21
DDR1-255	ENST00000504927	ADCYAP1	P18509	176 aa		13.76	□□□□□ -0.21
DDR1-255	ENST00000504927	RPS10	P46783	165 aa	Known RBP	13.76	□□□□□ -0.21
DDR1-255	ENST00000504927	POLR2K	P53803	58 aa	Known RBP	13.76	□□□□□ -0.21
DDR1-255	ENST00000504927	ENHO	Q6UWT2	76 aa		13.76	□□□□□ -0.21
DDR1-255	ENST00000504927	TRBV27	A0A0K0K1C4	114 aa		13.75	□□□□□ -0.21
DDR1-255	ENST00000504927	VCY	O14598	125 aa		13.75	□□□□□ -0.21
DDR1-255	ENST00000504927	APCS	P02743	223 aa		13.75	□□□□□ -0.21
DDR1-255	ENST00000504927	MIA	Q16674	131 aa		13.75	□□□□□ -0.21
DDR1-255	ENST00000504927	DEFB104A	Q8WTQ1	72 aa		13.75	□□□□□ -0.21
DDR1-255	ENST00000504927	IMMP2L	Q96T52	175 aa		13.75	□□□□□ -0.21
DDR1-255	ENST00000504927	CTDSP1	Q9GZU7	261 aa		13.75	□□□□□ -0.21
DDR1-255	ENST00000504927	PRR34	Q9NV39	138 aa		13.75	□□□□□ -0.21
DDR1-255	ENST00000504927	CKS2	P33552	79 aa		13.74	□□□□□ -0.21
DDR1-255	ENST00000504927	LINC00269	Q8N2A0	174 aa		13.74	□□□□□ -0.21
DDR1-255	ENST00000504927	NRAC	Q8N912	160 aa		13.74	□□□□□ -0.21
DDR1-255	ENST00000504927	C1orf43	Q9BWL3	253 aa		13.74	□□□□□ -0.21
DDR1-255	ENST00000504927	TRBV24-1	A0A075B6N3	115 aa		13.73	□□□□□ -0.21
DDR1-255	ENST00000504927	SMKR1	H3BMG3	65 aa		13.73	□□□□□ -0.21
DDR1-255	ENST00000504927	PPBP	P02775	128 aa		13.73	□□□□□ -0.21
DDR1-255	ENST00000504927	SUMO2	P61956	95 aa	Known RBP	13.73	□□□□□ -0.21
DDR1-255	ENST00000504927	BTF3L4	Q96K17	158 aa		13.73	□□□□□ -0.21
DDR1-255	ENST00000504927	C20orf78	Q9BR46	151 aa		13.73	□□□□□ -0.21
DDR1-255	ENST00000504927		Q8N814	137 aa		13.71	□□□□□ -0.21
DDR1-255	ENST00000504927	C20orf203	Q8NBC4	194 aa		13.71	□□□□□ -0.21
DDR1-255	ENST00000504927	NTN5	Q8WTR8	489 aa	Predicted RBP	13.71	□□□□□ -0.21
DDR1-255	ENST00000504927	APOB	P04114	4563 aa	Known RBP	13.71	□□□□□ -0.22
DDR1-255	ENST00000504927	HSPG2	P98160	4391 aa		13.7	□□□□□ -0.22
DDR1-255	ENST00000504927	TSHB	P01222	138 aa		13.7	□□□□□ -0.22
DDR1-255	ENST00000504927	REG3A	Q06141	175 aa		13.7	□□□□□ -0.22
DDR1-255	ENST00000504927	C10orf91	Q5T1B1	145 aa		13.7	□□□□□ -0.22
DDR1-255	ENST00000504927	AMMECR1L	Q6DCA0	310 aa		13.7	□□□□□ -0.22
DDR1-255	ENST00000504927	MAPKAPK5-AS1	Q8N8E1	139 aa		13.7	□□□□□ -0.22
DDR1-255	ENST00000504927	KIR2DL4	Q99706	377 aa		13.7	□□□□□ -0.22
DDR1-255	ENST00000504927	IGLV4-60	A0A075B6I1	120 aa		13.69	□□□□□ -0.22
DDR1-255	ENST00000504927	TRAV8-4	A0A0B4J246	113 aa		13.69	□□□□□ -0.22
DDR1-255	ENST00000504927	PHOX2A	O14813	284 aa		13.69	□□□□□ -0.22
DDR1-255	ENST00000504927	ESD	P10768	282 aa		13.69	□□□□□ -0.22
DDR1-255	ENST00000504927	RPL32	P62910	135 aa	Known RBP	13.69	□□□□□ -0.22
DDR1-255	ENST00000504927	TMEM242	Q9NWH2	141 aa		13.69	□□□□□ -0.22
DDR1-255	ENST00000504927		D6R8Y8	96 aa		13.68	□□□□□ -0.22
DDR1-255	ENST00000504927	TCAP	O15273	167 aa		13.68	□□□□□ -0.22
DDR1-255	ENST00000504927	TNFRSF6B	O95407	300 aa		13.68	□□□□□ -0.22
DDR1-255	ENST00000504927	ZNF25	P17030	456 aa	Predicted RBP	13.68	□□□□□ -0.22
DDR1-255	ENST00000504927	FCER1G	P30273	86 aa		13.68	□□□□□ -0.22
DDR1-255	ENST00000504927	BAALC	Q8WXS3	180 aa		13.68	□□□□□ -0.22
DDR1-255	ENST00000504927	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	13.67	□□□□□ -0.22
DDR1-255	ENST00000504927	TRAV9-1	A0A075B6T8	112 aa		13.67	□□□□□ -0.22
DDR1-255	ENST00000504927	IGKV2-29	A2NJV5	120 aa	Predicted RBP	13.67	□□□□□ -0.22
DDR1-255	ENST00000504927	FGF6	P10767	208 aa		13.67	□□□□□ -0.22
DDR1-255	ENST00000504927	RNASEK	Q6P5S7	137 aa	Known RBP	13.67	□□□□□ -0.22
DDR1-255	ENST00000504927	TMEM136	Q6ZRR5	245 aa		13.67	□□□□□ -0.22
DDR1-255	ENST00000504927	ORMDL3	Q8N138	153 aa		13.67	□□□□□ -0.22
DDR1-255	ENST00000504927	CARHSP1	Q9Y2V2	147 aa	Known RBP	13.67	□□□□□ -0.22
DDR1-255	ENST00000504927	CLPSL2	Q6UWE3	100 aa		13.66	□□□□□ -0.22
DDR1-255	ENST00000504927	TMEM101	Q96IK0	257 aa		13.66	□□□□□ -0.22
DDR1-255	ENST00000504927	C7orf77	A4D0Y5	90 aa		13.65	□□□□□ -0.22
DDR1-255	ENST00000504927	SMAGP	Q0VAQ4	97 aa		13.65	□□□□□ -0.22
DDR1-255	ENST00000504927	IGLV5-52	A0A0A0MRZ9	124 aa		13.64	□□□□□ -0.23
DDR1-255	ENST00000504927	CDK2AP2	O75956	126 aa		13.64	□□□□□ -0.23
DDR1-255	ENST00000504927	S100P	P25815	95 aa		13.64	□□□□□ -0.23
DDR1-255	ENST00000504927	FUS	P35637	526 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
DDR1-255	ENST00000504927	WFDC2	Q14508	124 aa		13.64	□□□□□ -0.23
DDR1-255	ENST00000504927	C14orf177	Q52M58	125 aa		13.64	□□□□□ -0.23
DDR1-255	ENST00000504927	LAMTOR2	Q9Y2Q5	125 aa		13.64	□□□□□ -0.23
DDR1-255	ENST00000504927	LECT2	O14960	151 aa		13.63	□□□□□ -0.23
DDR1-255	ENST00000504927	GCSH	P23434	173 aa		13.63	□□□□□ -0.23
DDR1-255	ENST00000504927	RHEB	Q15382	184 aa		13.63	□□□□□ -0.23
DDR1-255	ENST00000504927	MRPL52	Q86TS9	123 aa	Known RBP	13.63	□□□□□ -0.23
DDR1-255	ENST00000504927	PRELID3A	Q96N28	172 aa		13.63	□□□□□ -0.23
DDR1-255	ENST00000504927	PCLO	Q9Y6V0	5065 aa		13.63	□□□□□ -0.23
DDR1-255	ENST00000504927	NPY	P01303	97 aa		13.62	□□□□□ -0.23
DDR1-255	ENST00000504927	CLRN3	Q8NCR9	226 aa		13.62	□□□□□ -0.23
DDR1-255	ENST00000504927	TMEM18	Q96B42	140 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms