RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 OPRPNQ99935 248 aaPredicted RBP11.12□□□□□ -0.63
SNCAIP-207ENST00000504884 TM2D2Q9BX73 214 aa11.12□□□□□ -0.63
SNCAIP-207ENST00000504884 WFDC10AQ9H1F0 79 aa11.12□□□□□ -0.63
SNCAIP-207ENST00000504884 HECTD1Q9ULT8 2610 aa11.12□□□□□ -0.63
SNCAIP-207ENST00000504884 IGLV4-3A0A075B6K6 122 aa11.11□□□□□ -0.63
SNCAIP-207ENST00000504884 EMP1P54849 157 aa11.11□□□□□ -0.63
SNCAIP-207ENST00000504884 CEND1Q8N111 149 aa11.11□□□□□ -0.63
SNCAIP-207ENST00000504884 ZNRF2Q8NHG8 242 aa11.11□□□□□ -0.63
SNCAIP-207ENST00000504884 TMEM170BQ5T4T1 132 aa11.1□□□□□ -0.63
SNCAIP-207ENST00000504884 C16orf74Q96GX8 76 aa11.1□□□□□ -0.63
SNCAIP-207ENST00000504884 CSNK1G2-AS1Q8NCQ2 148 aa11.1□□□□□ -0.63
SNCAIP-207ENST00000504884 TRAV4A0A0B4J268 109 aa11.09□□□□□ -0.63
SNCAIP-207ENST00000504884 CCL25O15444 150 aa11.09□□□□□ -0.63
SNCAIP-207ENST00000504884 COTL1Q14019 142 aa11.09□□□□□ -0.63
SNCAIP-207ENST00000504884 Q6ZTI0 123 aa11.09□□□□□ -0.63
SNCAIP-207ENST00000504884 CHCHD7Q9BUK0 85 aa11.09□□□□□ -0.63
SNCAIP-207ENST00000504884 TRBV10-1A0A0K0K1A3 114 aa11.08□□□□□ -0.64
SNCAIP-207ENST00000504884 C9orf118A6NHY6 69 aa11.08□□□□□ -0.64
SNCAIP-207ENST00000504884 ZNF815PA8K554 130 aa11.08□□□□□ -0.64
SNCAIP-207ENST00000504884 SMIM13P0DJ93 91 aa11.08□□□□□ -0.64
SNCAIP-207ENST00000504884 INSL3P51460 131 aa11.08□□□□□ -0.64
SNCAIP-207ENST00000504884 ZNF479Q96JC4 524 aa11.08□□□□□ -0.64
SNCAIP-207ENST00000504884 AMELXQ99217 191 aa11.08□□□□□ -0.64
SNCAIP-207ENST00000504884 NOP10Q9NPE3 64 aaKnown RBP11.08□□□□□ -0.64
SNCAIP-207ENST00000504884 FXYD2P54710 66 aa11.08□□□□□ -0.64
SNCAIP-207ENST00000504884 AMMECR1LQ6DCA0 310 aa11.08□□□□□ -0.64
SNCAIP-207ENST00000504884 HIST1H4GQ99525 98 aa11.08□□□□□ -0.64
SNCAIP-207ENST00000504884 SPANXA1Q9NS26 97 aa11.08□□□□□ -0.64
SNCAIP-207ENST00000504884 TRBV7-3A0A075B6L6 115 aa11.07□□□□□ -0.64
SNCAIP-207ENST00000504884 CIDEAO60543 219 aa11.07□□□□□ -0.64
SNCAIP-207ENST00000504884 RRN3P1Q2M238 152 aa11.07□□□□□ -0.64
SNCAIP-207ENST00000504884 OVOL2Q9BRP0 275 aa11.07□□□□□ -0.64
SNCAIP-207ENST00000504884 SETXQ7Z333 2677 aaKnown RBP11.07□□□□□ -0.64
SNCAIP-207ENST00000504884 NOTCH2Q04721 2471 aa11.07□□□□□ -0.64
SNCAIP-207ENST00000504884 PLAC8L1A1L4L8 177 aa11.06□□□□□ -0.64
SNCAIP-207ENST00000504884 PHLDA1Q8WV24 401 aaPredicted RBP11.06□□□□□ -0.64
SNCAIP-207ENST00000504884 IGHV3-38A0A0C4DH36 116 aa11.06□□□□□ -0.64
SNCAIP-207ENST00000504884 RPL36AP83881 106 aaKnown RBP11.06□□□□□ -0.64
SNCAIP-207ENST00000504884 RPL36ALQ969Q0 106 aaKnown RBP11.06□□□□□ -0.64
SNCAIP-207ENST00000504884 FAM104AQ969W3 186 aa11.06□□□□□ -0.64
SNCAIP-207ENST00000504884 UBE2D4Q9Y2X8 147 aa11.06□□□□□ -0.64
SNCAIP-207ENST00000504884 OTOGQ6ZRI0 2925 aa11.05□□□□□ -0.64
SNCAIP-207ENST00000504884 K7EQD1 137 aa11.05□□□□□ -0.64
SNCAIP-207ENST00000504884 CRLF1O75462 422 aa11.05□□□□□ -0.64
SNCAIP-207ENST00000504884 SCGB1D4Q6XE38 83 aa11.05□□□□□ -0.64
SNCAIP-207ENST00000504884 A0A0J9YXV3 536 aa11.04□□□□□ -0.64
SNCAIP-207ENST00000504884 TMEM223A0PJW6 202 aa11.04□□□□□ -0.64
SNCAIP-207ENST00000504884 K7EP13 123 aa11.04□□□□□ -0.64
SNCAIP-207ENST00000504884 C9orf66Q5T8R8 295 aa11.04□□□□□ -0.64
SNCAIP-207ENST00000504884 RAB37Q96AX2 223 aa11.04□□□□□ -0.64
SNCAIP-207ENST00000504884 ZNF22P17026 224 aaPredicted RBP11.04□□□□□ -0.64
SNCAIP-207ENST00000504884 MRPS36P82909 103 aaKnown RBP11.04□□□□□ -0.64
SNCAIP-207ENST00000504884 CEMP1Q6PRD7 247 aaPredicted RBP11.04□□□□□ -0.64
SNCAIP-207ENST00000504884 DAZ4Q86SG3 579 aaKnown RBP11.04□□□□□ -0.64
SNCAIP-207ENST00000504884 DAZ3Q9NR90 486 aaKnown RBP11.04□□□□□ -0.64
SNCAIP-207ENST00000504884 TRGV2A0A075B6R0 118 aa11.03□□□□□ -0.64
SNCAIP-207ENST00000504884 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.03□□□□□ -0.64
SNCAIP-207ENST00000504884 IGKV2-29A2NJV5 120 aaPredicted RBP11.03□□□□□ -0.64
SNCAIP-207ENST00000504884 H3BUT2 72 aa11.03□□□□□ -0.64
SNCAIP-207ENST00000504884 J3QQQ9 107 aa11.03□□□□□ -0.64
SNCAIP-207ENST00000504884 LEPROTO15243 131 aa11.03□□□□□ -0.64
SNCAIP-207ENST00000504884 SLC25A29Q8N8R3 303 aa11.03□□□□□ -0.64
SNCAIP-207ENST00000504884 GAGE12BA1L429 117 aa11.02□□□□□ -0.64
SNCAIP-207ENST00000504884 GAGE7O76087 117 aa11.02□□□□□ -0.64
SNCAIP-207ENST00000504884 GAGE12FP0CL80 117 aa11.02□□□□□ -0.64
SNCAIP-207ENST00000504884 GAGE12GP0CL81 117 aa11.02□□□□□ -0.64
SNCAIP-207ENST00000504884 GAGE12IP0CL82 117 aa11.02□□□□□ -0.64
SNCAIP-207ENST00000504884 TIMM21Q9BVV7 248 aa11.02□□□□□ -0.64
SNCAIP-207ENST00000504884 NHP2Q9NX24 153 aaKnown RBP11.02□□□□□ -0.64
SNCAIP-207ENST00000504884 LGALS3P17931 250 aaKnown RBP11.02□□□□□ -0.65
SNCAIP-207ENST00000504884 PLEKHB2Q96CS7 222 aa11.02□□□□□ -0.65
SNCAIP-207ENST00000504884 GAGE10A6NGK3 116 aa11.01□□□□□ -0.65
SNCAIP-207ENST00000504884 UBE2D3P61077 147 aa11.01□□□□□ -0.65
SNCAIP-207ENST00000504884 UBE2D2P62837 147 aa11.01□□□□□ -0.65
SNCAIP-207ENST00000504884 NIPBLQ6KC79 2804 aaeCLIP11.01□□□□□ -0.65
SNCAIP-207ENST00000504884 A0A0J9YY99 117 aa11□□□□□ -0.65
SNCAIP-207ENST00000504884 TINCRA0A1B0GVN0 87 aa11□□□□□ -0.65
SNCAIP-207ENST00000504884 TSPEAR-AS2P59090 65 aa11□□□□□ -0.65
SNCAIP-207ENST00000504884 SRSF9Q13242 221 aaKnown RBP eCLIP11□□□□□ -0.65
SNCAIP-207ENST00000504884 DGAT2L7PQ6IED9 249 aa11□□□□□ -0.65
SNCAIP-207ENST00000504884 GTF2H5Q6ZYL4 71 aa11□□□□□ -0.65
SNCAIP-207ENST00000504884 TRBV6-4A0A1B0GX49 114 aa11□□□□□ -0.65
SNCAIP-207ENST00000504884 C12orf74Q32Q52 190 aa11□□□□□ -0.65
SNCAIP-207ENST00000504884 CITED1Q99966 193 aa11□□□□□ -0.65
SNCAIP-207ENST00000504884 A0A1W2PPM0 123 aa10.99□□□□□ -0.65
SNCAIP-207ENST00000504884 GAGE12JA6NER3 117 aa10.99□□□□□ -0.65
SNCAIP-207ENST00000504884 GAGE4Q13068 117 aa10.99□□□□□ -0.65
SNCAIP-207ENST00000504884 GAGE5Q13069 117 aa10.99□□□□□ -0.65
SNCAIP-207ENST00000504884 GAGE13Q4V321 117 aa10.99□□□□□ -0.65
SNCAIP-207ENST00000504884 SAMD5Q5TGI4 173 aa10.99□□□□□ -0.65
SNCAIP-207ENST00000504884 K7ERJ3 54 aa10.98□□□□□ -0.65
SNCAIP-207ENST00000504884 SMAGPQ0VAQ4 97 aa10.98□□□□□ -0.65
SNCAIP-207ENST00000504884 RNASE13Q5GAN3 156 aaKnown RBP10.98□□□□□ -0.65
SNCAIP-207ENST00000504884 Q6ZUT4 128 aa10.98□□□□□ -0.65
SNCAIP-207ENST00000504884 NAA38Q9BRA0 125 aaKnown RBP10.98□□□□□ -0.65
SNCAIP-207ENST00000504884 SPANXB1Q9NS25 103 aaPredicted RBP10.98□□□□□ -0.65
SNCAIP-207ENST00000504884 CSDC2Q9Y534 153 aaKnown RBP10.98□□□□□ -0.65
SNCAIP-207ENST00000504884 JMJD1CQ15652 2540 aa10.98□□□□□ -0.65
SNCAIP-207ENST00000504884 C2CD3Q4AC94 2353 aa10.98□□□□□ -0.65
SNCAIP-207ENST00000504884 TRGV4A0A0C4DH28 118 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms