RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 ZNF727A8MUV8 499 aa8.92□□□□□ -0.98
HOXC6-203ENST00000504315 CEBPGP53567 150 aa8.92□□□□□ -0.98
HOXC6-203ENST00000504315 GFRA4Q9GZZ7 299 aa8.92□□□□□ -0.98
HOXC6-203ENST00000504315 OSTCQ9NRP0 149 aa8.92□□□□□ -0.98
HOXC6-203ENST00000504315 IGLV4-60A0A075B6I1 120 aa8.91□□□□□ -0.98
HOXC6-203ENST00000504315 REG3AQ06141 175 aa8.91□□□□□ -0.98
HOXC6-203ENST00000504315 COTL1Q14019 142 aa8.91□□□□□ -0.98
HOXC6-203ENST00000504315 CLPSL2Q6UWE3 100 aa8.91□□□□□ -0.98
HOXC6-203ENST00000504315 TEX261Q6UWH6 196 aa8.91□□□□□ -0.98
HOXC6-203ENST00000504315 SMIM15Q7Z3B0 74 aa8.91□□□□□ -0.98
HOXC6-203ENST00000504315 TSKUQ8WUA8 353 aa8.91□□□□□ -0.98
HOXC6-203ENST00000504315 TRAV8-4A0A0B4J246 113 aa8.9□□□□□ -0.98
HOXC6-203ENST00000504315 USP17L23D6RBM5 183 aa8.9□□□□□ -0.98
HOXC6-203ENST00000504315 NCR2O95944 276 aa8.9□□□□□ -0.98
HOXC6-203ENST00000504315 HLA-DQA1P01909 254 aa8.9□□□□□ -0.98
HOXC6-203ENST00000504315 LINC01620Q4KN68 170 aa8.9□□□□□ -0.98
HOXC6-203ENST00000504315 RPL39LQ96EH5 51 aaKnown RBP8.9□□□□□ -0.98
HOXC6-203ENST00000504315 SRRM2Q9UQ35 2752 aaKnown RBP8.89□□□□□ -0.99
HOXC6-203ENST00000504315 HIGD1CA8MV81 97 aa8.89□□□□□ -0.99
HOXC6-203ENST00000504315 FAM229AH3BQW9 127 aa8.89□□□□□ -0.99
HOXC6-203ENST00000504315 INAFM2P0DMQ5 153 aa8.89□□□□□ -0.99
HOXC6-203ENST00000504315 AMTP48728 403 aa8.89□□□□□ -0.99
HOXC6-203ENST00000504315 FAM74A3Q4VXF1 159 aa8.89□□□□□ -0.99
HOXC6-203ENST00000504315 DMBT1Q9UGM3 2413 aaPredicted RBP8.88□□□□□ -0.99
HOXC6-203ENST00000504315 TRBV6-5A0A0K0K1A5 114 aa8.88□□□□□ -0.99
HOXC6-203ENST00000504315 A0A1B0GUT8 65 aa8.88□□□□□ -0.99
HOXC6-203ENST00000504315 PRSS1P07477 247 aa8.88□□□□□ -0.99
HOXC6-203ENST00000504315 SCXQ7RTU7 201 aa8.88□□□□□ -0.99
HOXC6-203ENST00000504315 ISOC2Q96AB3 205 aa8.88□□□□□ -0.99
HOXC6-203ENST00000504315 BORCS7Q96B45 105 aa8.88□□□□□ -0.99
HOXC6-203ENST00000504315 TMEM191AQ9H0A3 160 aa8.88□□□□□ -0.99
HOXC6-203ENST00000504315 V9GYV3 84 aa8.88□□□□□ -0.99
HOXC6-203ENST00000504315 SDHAF1A6NFY7 115 aa8.87□□□□□ -0.99
HOXC6-203ENST00000504315 C9JQL5 133 aa8.87□□□□□ -0.99
HOXC6-203ENST00000504315 H7C423 109 aa8.87□□□□□ -0.99
HOXC6-203ENST00000504315 UBE2L6O14933 153 aa8.87□□□□□ -0.99
HOXC6-203ENST00000504315 DGAT2L7PQ6IED9 249 aa8.87□□□□□ -0.99
HOXC6-203ENST00000504315 DEFB104AQ8WTQ1 72 aa8.87□□□□□ -0.99
HOXC6-203ENST00000504315 SMDT1Q9H4I9 107 aa8.87□□□□□ -0.99
HOXC6-203ENST00000504315 IGLV10-54A0A075B6I4 117 aa8.86□□□□□ -0.99
HOXC6-203ENST00000504315 RPL23P62829 140 aaKnown RBP8.86□□□□□ -0.99
HOXC6-203ENST00000504315 CLRN3Q8NCR9 226 aa8.86□□□□□ -0.99
HOXC6-203ENST00000504315 RNF185Q96GF1 192 aa8.86□□□□□ -0.99
HOXC6-203ENST00000504315 CHAC1Q9BUX1 264 aa8.86□□□□□ -0.99
HOXC6-203ENST00000504315 I3L3M4 83 aa8.85□□□□□ -0.99
HOXC6-203ENST00000504315 GAS8-AS1O95177 125 aa8.85□□□□□ -0.99
HOXC6-203ENST00000504315 APCSP02743 223 aa8.85□□□□□ -0.99
HOXC6-203ENST00000504315 TMEM241Q24JQ0 296 aa8.85□□□□□ -0.99
HOXC6-203ENST00000504315 C9orf163Q8N9P6 203 aa8.85□□□□□ -0.99
HOXC6-203ENST00000504315 NUP35Q8NFH5 326 aa8.85□□□□□ -0.99
HOXC6-203ENST00000504315 RAB4AP20338 218 aa8.84□□□□□ -0.99
HOXC6-203ENST00000504315 LINC00528Q8N1L1 170 aa8.84□□□□□ -0.99
HOXC6-203ENST00000504315 MRAP2Q96G30 205 aa8.84□□□□□ -0.99
HOXC6-203ENST00000504315 NAT8Q9UHE5 227 aa8.84□□□□□ -0.99
HOXC6-203ENST00000504315 ESDP10768 282 aa8.83□□□□□ -1
HOXC6-203ENST00000504315 ZNF25P17030 456 aaPredicted RBP8.83□□□□□ -1
HOXC6-203ENST00000504315 RPS10P46783 165 aaKnown RBP8.83□□□□□ -1
HOXC6-203ENST00000504315 POLR2KP53803 58 aaKnown RBP8.83□□□□□ -1
HOXC6-203ENST00000504315 CNBPP62633 177 aaKnown RBP8.83□□□□□ -1
HOXC6-203ENST00000504315 SRSF3P84103 164 aaKnown RBP8.83□□□□□ -1
HOXC6-203ENST00000504315 RIGQ13278 110 aa8.83□□□□□ -1
HOXC6-203ENST00000504315 PEA15Q15121 130 aa8.83□□□□□ -1
HOXC6-203ENST00000504315 AMN1Q8IY45 258 aa8.83□□□□□ -1
HOXC6-203ENST00000504315 CIRBP-AS1Q8TBR5 109 aa8.83□□□□□ -1
HOXC6-203ENST00000504315 NAT8BQ9UHF3 227 aa8.83□□□□□ -1
HOXC6-203ENST00000504315 MYCBP2O75592 4640 aa8.82□□□□□ -1
HOXC6-203ENST00000504315 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.82□□□□□ -1
HOXC6-203ENST00000504315 TRBV27A0A0K0K1C4 114 aa8.82□□□□□ -1
HOXC6-203ENST00000504315 IGKV2-29A2NJV5 120 aaPredicted RBP8.82□□□□□ -1
HOXC6-203ENST00000504315 PLA2G1BP04054 148 aaKnown RBP8.82□□□□□ -1
HOXC6-203ENST00000504315 FGF6P10767 208 aa8.82□□□□□ -1
HOXC6-203ENST00000504315 ADIRFQ15847 76 aa8.82□□□□□ -1
HOXC6-203ENST00000504315 ST20Q9HBF5 79 aa8.82□□□□□ -1
HOXC6-203ENST00000504315 SMIM27A0A1W2PRY6 76 aa8.81□□□□□ -1
HOXC6-203ENST00000504315 TSHBP01222 138 aa8.81□□□□□ -1
HOXC6-203ENST00000504315 PMCHP20382 165 aa8.81□□□□□ -1
HOXC6-203ENST00000504315 AMMECR1LQ6DCA0 310 aa8.81□□□□□ -1
HOXC6-203ENST00000504315 KRTAP10-4P60372 401 aaPredicted RBP8.8□□□□□ -1
HOXC6-203ENST00000504315 NRACQ8N912 160 aa8.8□□□□□ -1
HOXC6-203ENST00000504315 hDV102S1A0JD36 115 aa8.79□□□□□ -1
HOXC6-203ENST00000504315 PPP1R17O96001 155 aa8.79□□□□□ -1
HOXC6-203ENST00000504315 SLPIP03973 132 aa8.79□□□□□ -1
HOXC6-203ENST00000504315 LCE2DQ5TA82 110 aaPredicted RBP8.79□□□□□ -1
HOXC6-203ENST00000504315 RNASEKQ6P5S7 137 aaKnown RBP8.79□□□□□ -1
HOXC6-203ENST00000504315 SDIM1Q6ZPB5 146 aa8.79□□□□□ -1
HOXC6-203ENST00000504315 MRPL52Q86TS9 123 aaKnown RBP8.79□□□□□ -1
HOXC6-203ENST00000504315 C15orf56Q8N910 161 aa8.79□□□□□ -1
HOXC6-203ENST00000504315 OR5A1Q8NGJ0 315 aa8.79□□□□□ -1
HOXC6-203ENST00000504315 TMEM242Q9NWH2 141 aa8.79□□□□□ -1
HOXC6-203ENST00000504315 GAGE12HA6NDE8 117 aa8.78□□□□□ -1
HOXC6-203ENST00000504315 CIRBPQ14011 172 aaKnown RBP8.78□□□□□ -1
HOXC6-203ENST00000504315 FAM104BQ5XKR9 115 aa8.78□□□□□ -1
HOXC6-203ENST00000504315 CHCHD10Q8WYQ3 142 aaPredicted RBP8.78□□□□□ -1
HOXC6-203ENST00000504315 IGKV3OR2-268A0A0C4DH90 116 aa8.77□□□□□ -1.01
HOXC6-203ENST00000504315 A0A1B0GW15 77 aa8.77□□□□□ -1.01
HOXC6-203ENST00000504315 C7orf77A4D0Y5 90 aa8.77□□□□□ -1.01
HOXC6-203ENST00000504315 SMKR1H3BMG3 65 aa8.77□□□□□ -1.01
HOXC6-203ENST00000504315 SUMO2P61956 95 aaKnown RBP8.77□□□□□ -1.01
HOXC6-203ENST00000504315 MRPL51Q4U2R6 128 aaKnown RBP8.77□□□□□ -1.01
HOXC6-203ENST00000504315 AP5S1Q9NUS5 200 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms