RNA–Protein interactions for RNA: ENST00000503659.5

RNF4-204, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-204ENST00000503659 DEFB104AQ8WTQ1 72 aa11.95□□□□□ -0.5
RNF4-204ENST00000503659 A8MWL6 223 aa11.94□□□□□ -0.5
RNF4-204ENST00000503659 TMEM243Q9BU79 118 aa11.94□□□□□ -0.5
RNF4-204ENST00000503659 HERC1Q15751 4861 aa11.93□□□□□ -0.5
RNF4-204ENST00000503659 HLA-DQA1P01909 254 aa11.93□□□□□ -0.5
RNF4-204ENST00000503659 C20orf203Q8NBC4 194 aa11.93□□□□□ -0.5
RNF4-204ENST00000503659 RPL39LQ96EH5 51 aaKnown RBP11.93□□□□□ -0.5
RNF4-204ENST00000503659 FLG2Q5D862 2391 aaPredicted RBP11.92□□□□□ -0.5
RNF4-204ENST00000503659 IGLV4-60A0A075B6I1 120 aa11.92□□□□□ -0.5
RNF4-204ENST00000503659 ZNF727A8MUV8 499 aa11.92□□□□□ -0.5
RNF4-204ENST00000503659 A0A1B0GUV1 79 aa11.91□□□□□ -0.5
RNF4-204ENST00000503659 USP17L23D6RBM5 183 aa11.91□□□□□ -0.5
RNF4-204ENST00000503659 REG3AQ06141 175 aa11.91□□□□□ -0.5
RNF4-204ENST00000503659 COTL1Q14019 142 aa11.91□□□□□ -0.5
RNF4-204ENST00000503659 GFRA4Q9GZZ7 299 aa11.91□□□□□ -0.5
RNF4-204ENST00000503659 MYCBP2O75592 4640 aa11.9□□□□□ -0.5
RNF4-204ENST00000503659 AMTP48728 403 aa11.9□□□□□ -0.5
RNF4-204ENST00000503659 C14orf177Q52M58 125 aa11.9□□□□□ -0.5
RNF4-204ENST00000503659 SMIM15Q7Z3B0 74 aa11.9□□□□□ -0.5
RNF4-204ENST00000503659 TSKUQ8WUA8 353 aa11.9□□□□□ -0.5
RNF4-204ENST00000503659 OSTCQ9NRP0 149 aa11.9□□□□□ -0.5
RNF4-204ENST00000503659 HIGD1CA8MV81 97 aa11.89□□□□□ -0.51
RNF4-204ENST00000503659 C9JQL5 133 aa11.88□□□□□ -0.51
RNF4-204ENST00000503659 IGLV10-54A0A075B6I4 117 aa11.87□□□□□ -0.51
RNF4-204ENST00000503659 UBE2L6O14933 153 aa11.87□□□□□ -0.51
RNF4-204ENST00000503659 GAS8-AS1O95177 125 aa11.87□□□□□ -0.51
RNF4-204ENST00000503659 PLA2G1BP04054 148 aaKnown RBP11.87□□□□□ -0.51
RNF4-204ENST00000503659 PRSS1P07477 247 aa11.87□□□□□ -0.51
RNF4-204ENST00000503659 TEX261Q6UWH6 196 aa11.87□□□□□ -0.51
RNF4-204ENST00000503659 SCXQ7RTU7 201 aa11.87□□□□□ -0.51
RNF4-204ENST00000503659 V9GYV3 84 aa11.87□□□□□ -0.51
RNF4-204ENST00000503659 A0A1B0GUT8 65 aa11.86□□□□□ -0.51
RNF4-204ENST00000503659 FAM231BA6NCW3 169 aa11.86□□□□□ -0.51
RNF4-204ENST00000503659 SRSF3P84103 164 aaKnown RBP11.86□□□□□ -0.51
RNF4-204ENST00000503659 ISOC2Q96AB3 205 aa11.86□□□□□ -0.51
RNF4-204ENST00000503659 BORCS7Q96B45 105 aa11.86□□□□□ -0.51
RNF4-204ENST00000503659 TRBV6-5A0A0K0K1A5 114 aa11.85□□□□□ -0.51
RNF4-204ENST00000503659 SDHAF1A6NFY7 115 aa11.85□□□□□ -0.51
RNF4-204ENST00000503659 NCR2O95944 276 aa11.85□□□□□ -0.51
RNF4-204ENST00000503659 RPL23P62829 140 aaKnown RBP11.85□□□□□ -0.51
RNF4-204ENST00000503659 FAM74A3Q4VXF1 159 aa11.85□□□□□ -0.51
RNF4-204ENST00000503659 RNF185Q96GF1 192 aa11.85□□□□□ -0.51
RNF4-204ENST00000503659 TMEM191AQ9H0A3 160 aa11.85□□□□□ -0.51
RNF4-204ENST00000503659 TRAV8-4A0A0B4J246 113 aa11.84□□□□□ -0.51
RNF4-204ENST00000503659 TMEM241Q24JQ0 296 aa11.84□□□□□ -0.51
RNF4-204ENST00000503659 LINC00528Q8N1L1 170 aa11.83□□□□□ -0.52
RNF4-204ENST00000503659 NUP35Q8NFH5 326 aa11.83□□□□□ -0.52
RNF4-204ENST00000503659 CHAC1Q9BUX1 264 aa11.83□□□□□ -0.52
RNF4-204ENST00000503659 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.82□□□□□ -0.52
RNF4-204ENST00000503659 IGKV2-29A2NJV5 120 aaPredicted RBP11.82□□□□□ -0.52
RNF4-204ENST00000503659 APCSP02743 223 aa11.82□□□□□ -0.52
RNF4-204ENST00000503659 RAB4AP20338 218 aa11.82□□□□□ -0.52
RNF4-204ENST00000503659 RPS10P46783 165 aaKnown RBP11.82□□□□□ -0.52
RNF4-204ENST00000503659 NAT8Q9UHE5 227 aa11.82□□□□□ -0.52
RNF4-204ENST00000503659 I3L3M4 83 aa11.81□□□□□ -0.52
RNF4-204ENST00000503659 ADIRFQ15847 76 aa11.81□□□□□ -0.52
RNF4-204ENST00000503659 DGAT2L7PQ6IED9 249 aa11.81□□□□□ -0.52
RNF4-204ENST00000503659 AMN1Q8IY45 258 aa11.81□□□□□ -0.52
RNF4-204ENST00000503659 CIRBP-AS1Q8TBR5 109 aa11.81□□□□□ -0.52
RNF4-204ENST00000503659 H7C423 109 aa11.8□□□□□ -0.52
RNF4-204ENST00000503659 TSHBP01222 138 aa11.8□□□□□ -0.52
RNF4-204ENST00000503659 MRAP2Q96G30 205 aa11.8□□□□□ -0.52
RNF4-204ENST00000503659 ST20Q9HBF5 79 aa11.8□□□□□ -0.52
RNF4-204ENST00000503659 FGF6P10767 208 aa11.79□□□□□ -0.52
RNF4-204ENST00000503659 PMCHP20382 165 aa11.79□□□□□ -0.52
RNF4-204ENST00000503659 PEA15Q15121 130 aa11.79□□□□□ -0.52
RNF4-204ENST00000503659 C9orf163Q8N9P6 203 aa11.79□□□□□ -0.52
RNF4-204ENST00000503659 CLRN3Q8NCR9 226 aa11.79□□□□□ -0.52
RNF4-204ENST00000503659 SMDT1Q9H4I9 107 aa11.79□□□□□ -0.52
RNF4-204ENST00000503659 ESDP10768 282 aa11.78□□□□□ -0.52
RNF4-204ENST00000503659 POLR2KP53803 58 aaKnown RBP11.78□□□□□ -0.52
RNF4-204ENST00000503659 RIGQ13278 110 aa11.78□□□□□ -0.52
RNF4-204ENST00000503659 AMMECR1LQ6DCA0 310 aa11.78□□□□□ -0.52
RNF4-204ENST00000503659 TMEM242Q9NWH2 141 aa11.78□□□□□ -0.52
RNF4-204ENST00000503659 NAT8BQ9UHF3 227 aa11.78□□□□□ -0.52
RNF4-204ENST00000503659 IGKV3OR2-268A0A0C4DH90 116 aa11.77□□□□□ -0.53
RNF4-204ENST00000503659 TRBV27A0A0K0K1C4 114 aa11.77□□□□□ -0.53
RNF4-204ENST00000503659 SMIM27A0A1W2PRY6 76 aa11.77□□□□□ -0.53
RNF4-204ENST00000503659 SMKR1H3BMG3 65 aa11.77□□□□□ -0.53
RNF4-204ENST00000503659 CNBPP62633 177 aaKnown RBP11.77□□□□□ -0.53
RNF4-204ENST00000503659 RNASEKQ6P5S7 137 aaKnown RBP11.77□□□□□ -0.53
RNF4-204ENST00000503659 hDV102S1A0JD36 115 aa11.76□□□□□ -0.53
RNF4-204ENST00000503659 GAGE12HA6NDE8 117 aa11.76□□□□□ -0.53
RNF4-204ENST00000503659 J3QL48 77 aa11.76□□□□□ -0.53
RNF4-204ENST00000503659 NRACQ8N912 160 aa11.76□□□□□ -0.53
RNF4-204ENST00000503659 SLPIP03973 132 aa11.75□□□□□ -0.53
RNF4-204ENST00000503659 ZNF25P17030 456 aaPredicted RBP11.75□□□□□ -0.53
RNF4-204ENST00000503659 KRTAP10-4P60372 401 aaPredicted RBP11.75□□□□□ -0.53
RNF4-204ENST00000503659 C15orf56Q8N910 161 aa11.75□□□□□ -0.53
RNF4-204ENST00000503659 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.75□□□□□ -0.53
RNF4-204ENST00000503659 KRTAP29-1A8MX34 341 aaPredicted RBP11.74□□□□□ -0.53
RNF4-204ENST00000503659 PANO1I0J062 215 aa11.74□□□□□ -0.53
RNF4-204ENST00000503659 SDIM1Q6ZPB5 146 aa11.74□□□□□ -0.53
RNF4-204ENST00000503659 CHCHD10Q8WYQ3 142 aaPredicted RBP11.74□□□□□ -0.53
RNF4-204ENST00000503659 OR5A1Q8NGJ0 315 aa11.73□□□□□ -0.53
RNF4-204ENST00000503659 MRPL51Q4U2R6 128 aaKnown RBP11.72□□□□□ -0.53
RNF4-204ENST00000503659 FAM104BQ5XKR9 115 aa11.72□□□□□ -0.53
RNF4-204ENST00000503659 MRPL52Q86TS9 123 aaKnown RBP11.72□□□□□ -0.53
RNF4-204ENST00000503659 PKHD1L1Q86WI1 4243 aa11.71□□□□□ -0.53
RNF4-204ENST00000503659 C7orf77A4D0Y5 90 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms