RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 MRPL55Q7Z7F7 128 aaKnown RBP8.53□□□□□ -1.04
USP46-204ENST00000503060 POM121L12Q8N7R1 296 aa8.53□□□□□ -1.04
USP46-204ENST00000503060 A8MTW9 85 aa8.53□□□□□ -1.04
USP46-204ENST00000503060 NDUFC2O95298 119 aa8.53□□□□□ -1.04
USP46-204ENST00000503060 GHRHP01286 108 aa8.53□□□□□ -1.04
USP46-204ENST00000503060 LAGE3Q14657 143 aa8.53□□□□□ -1.04
USP46-204ENST00000503060 DEFB114Q30KQ6 69 aa8.53□□□□□ -1.04
USP46-204ENST00000503060 TRPT1Q86TN4 253 aaKnown RBP8.53□□□□□ -1.04
USP46-204ENST00000503060 C18orf15Q96N68 181 aa8.53□□□□□ -1.04
USP46-204ENST00000503060 SMIM2Q9BVW6 85 aa8.53□□□□□ -1.04
USP46-204ENST00000503060 KIF25-AS1Q9Y6Z4 181 aa8.53□□□□□ -1.04
USP46-204ENST00000503060 MUC4Q99102 2169 aa8.53□□□□□ -1.04
USP46-204ENST00000503060 HLA-DRB4P13762 266 aa8.52□□□□□ -1.05
USP46-204ENST00000503060 C20orf78Q9BR46 151 aa8.52□□□□□ -1.05
USP46-204ENST00000503060 C16orf95Q9H693 158 aa8.52□□□□□ -1.05
USP46-204ENST00000503060 HLA-DRB4X5D2U9 266 aa8.52□□□□□ -1.05
USP46-204ENST00000503060 AGRNO00468 2067 aa8.52□□□□□ -1.05
USP46-204ENST00000503060 LINC00315P59091 139 aa8.52□□□□□ -1.05
USP46-204ENST00000503060 SUMO2P61956 95 aaKnown RBP8.52□□□□□ -1.05
USP46-204ENST00000503060 RPL39LQ96EH5 51 aaKnown RBP8.52□□□□□ -1.05
USP46-204ENST00000503060 A0A0A0MQY5 61 aa8.51□□□□□ -1.05
USP46-204ENST00000503060 H3BMM0 161 aa8.51□□□□□ -1.05
USP46-204ENST00000503060 LINC01006Q8NI28 216 aa8.51□□□□□ -1.05
USP46-204ENST00000503060 MAP6D1Q9H9H5 199 aa8.51□□□□□ -1.05
USP46-204ENST00000503060 UNC79Q9P2D8 2635 aa8.51□□□□□ -1.05
USP46-204ENST00000503060 RBMY1BA6NDE4 496 aaKnown RBP8.5□□□□□ -1.05
USP46-204ENST00000503060 RBMY1EA6NEQ0 496 aaKnown RBP8.5□□□□□ -1.05
USP46-204ENST00000503060 J3QQQ9 107 aa8.5□□□□□ -1.05
USP46-204ENST00000503060 PPP1R17O96001 155 aa8.5□□□□□ -1.05
USP46-204ENST00000503060 RBMY1DP0C7P1 496 aaKnown RBP8.5□□□□□ -1.05
USP46-204ENST00000503060 FAM240AA0A1B0GVK7 77 aa8.5□□□□□ -1.05
USP46-204ENST00000503060 RBMY1A1P0DJD3 496 aaKnown RBP8.5□□□□□ -1.05
USP46-204ENST00000503060 RBMY1CP0DJD4 496 aa8.5□□□□□ -1.05
USP46-204ENST00000503060 FGF6P10767 208 aa8.5□□□□□ -1.05
USP46-204ENST00000503060 RBMY1FQ15415 496 aaKnown RBP8.5□□□□□ -1.05
USP46-204ENST00000503060 SLC25A34Q6PIV7 304 aa8.5□□□□□ -1.05
USP46-204ENST00000503060 SORL1Q92673 2214 aa8.5□□□□□ -1.05
USP46-204ENST00000503060 ACANP16112 2415 aa8.49□□□□□ -1.05
USP46-204ENST00000503060 ANK3Q12955 4377 aaKnown RBP8.49□□□□□ -1.05
USP46-204ENST00000503060 TRGV11A0A075B6L2 103 aa8.49□□□□□ -1.05
USP46-204ENST00000503060 LYRM7Q5U5X0 104 aa8.49□□□□□ -1.05
USP46-204ENST00000503060 TP73-AS1Q9UF72 201 aa8.49□□□□□ -1.05
USP46-204ENST00000503060 ITPR2Q14571 2701 aa8.49□□□□□ -1.05
USP46-204ENST00000503060 HERVK_113P63121 156 aa8.49□□□□□ -1.05
USP46-204ENST00000503060 ORMDL2Q53FV1 153 aa8.49□□□□□ -1.05
USP46-204ENST00000503060 BVES-AS1Q5T3Y7 98 aa8.49□□□□□ -1.05
USP46-204ENST00000503060 SUMO4Q6EEV6 95 aa8.49□□□□□ -1.05
USP46-204ENST00000503060 DKK2Q9UBU2 259 aa8.49□□□□□ -1.05
USP46-204ENST00000503060 C9orf118A6NHY6 69 aa8.48□□□□□ -1.05
USP46-204ENST00000503060 K7EMI3 77 aa8.48□□□□□ -1.05
USP46-204ENST00000503060 DPM2O94777 84 aa8.48□□□□□ -1.05
USP46-204ENST00000503060 PRSS1P07477 247 aa8.48□□□□□ -1.05
USP46-204ENST00000503060 PRIMA1Q86XR5 153 aa8.48□□□□□ -1.05
USP46-204ENST00000503060 ZNF256Q9Y2P7 627 aaPredicted RBP8.48□□□□□ -1.05
USP46-204ENST00000503060 FAM236AA0A1B0GUQ0 79 aa8.48□□□□□ -1.05
USP46-204ENST00000503060 FAM236BA0A1B0GV22 79 aa8.48□□□□□ -1.05
USP46-204ENST00000503060 SMR3AQ99954 134 aa8.48□□□□□ -1.05
USP46-204ENST00000503060 AKAP9Q99996 3911 aa8.47□□□□□ -1.05
USP46-204ENST00000503060 F8W1H4 67 aa8.47□□□□□ -1.05
USP46-204ENST00000503060 COX8AP10176 69 aa8.47□□□□□ -1.05
USP46-204ENST00000503060 GAGE2BQ13066 116 aa8.47□□□□□ -1.05
USP46-204ENST00000503060 GAGE2EQ4V326 116 aa8.47□□□□□ -1.05
USP46-204ENST00000503060 GAGE2DQ9UEU5 116 aa8.47□□□□□ -1.05
USP46-204ENST00000503060 F5H697 171 aa8.46□□□□□ -1.05
USP46-204ENST00000503060 APOC4P55056 127 aa8.46□□□□□ -1.05
USP46-204ENST00000503060 FOXI1Q12951 378 aa8.46□□□□□ -1.05
USP46-204ENST00000503060 PFN2P35080 140 aa8.46□□□□□ -1.06
USP46-204ENST00000503060 FAM74A4Q5TZK3 123 aa8.46□□□□□ -1.06
USP46-204ENST00000503060 ODF3L2Q3SX64 289 aa8.45□□□□□ -1.06
USP46-204ENST00000503060 ZNF876PQ49A33 203 aa8.45□□□□□ -1.06
USP46-204ENST00000503060 TOMM6Q96B49 74 aa8.45□□□□□ -1.06
USP46-204ENST00000503060 TRBV20-1A0A075B6N2 111 aa8.45□□□□□ -1.06
USP46-204ENST00000503060 POLR2KP53803 58 aaKnown RBP8.45□□□□□ -1.06
USP46-204ENST00000503060 SEC11AP67812 179 aa8.45□□□□□ -1.06
USP46-204ENST00000503060 FASNP49327 2511 aaKnown RBP8.45□□□□□ -1.06
USP46-204ENST00000503060 LY6G6DO95868 133 aa8.44□□□□□ -1.06
USP46-204ENST00000503060 HTN1P15515 57 aa8.44□□□□□ -1.06
USP46-204ENST00000503060 PYGO1Q9Y3Y4 419 aa8.44□□□□□ -1.06
USP46-204ENST00000503060 TRBV6-5A0A0K0K1A5 114 aa8.44□□□□□ -1.06
USP46-204ENST00000503060 H3BRM9 83 aa8.44□□□□□ -1.06
USP46-204ENST00000503060 NMUP48645 174 aa8.44□□□□□ -1.06
USP46-204ENST00000503060 ZNF56Q15929 161 aa8.44□□□□□ -1.06
USP46-204ENST00000503060 LINC00482Q8N8I6 264 aa8.44□□□□□ -1.06
USP46-204ENST00000503060 SCGB3A1Q96QR1 104 aa8.44□□□□□ -1.06
USP46-204ENST00000503060 M0QY20 66 aa8.43□□□□□ -1.06
USP46-204ENST00000503060 IGKCP01834 107 aa8.43□□□□□ -1.06
USP46-204ENST00000503060 PROK1P58294 105 aa8.43□□□□□ -1.06
USP46-204ENST00000503060 C2orf66Q6UXQ4 117 aa8.43□□□□□ -1.06
USP46-204ENST00000503060 ATP6V0E2Q8NHE4 81 aa8.43□□□□□ -1.06
USP46-204ENST00000503060 SPCS1Q9Y6A9 102 aa8.43□□□□□ -1.06
USP46-204ENST00000503060 INSP01308 110 aa8.43□□□□□ -1.06
USP46-204ENST00000503060 LINC00467Q9BRT7 94 aa8.43□□□□□ -1.06
USP46-204ENST00000503060 MTORP42345 2549 aa8.43□□□□□ -1.06
USP46-204ENST00000503060 SDHAF1A6NFY7 115 aa8.42□□□□□ -1.06
USP46-204ENST00000503060 ADARB2-AS1A8MUL3 147 aa8.42□□□□□ -1.06
USP46-204ENST00000503060 PRM2P04554 102 aa8.42□□□□□ -1.06
USP46-204ENST00000503060 RPL18AQ02543 176 aaKnown RBP8.42□□□□□ -1.06
USP46-204ENST00000503060 MORN3Q6PF18 240 aaPredicted RBP8.42□□□□□ -1.06
USP46-204ENST00000503060 C2orf91Q6ZV80 131 aa8.42□□□□□ -1.06
USP46-204ENST00000503060 MRPL35Q9NZE8 188 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms