RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 A0A0J9YY99 117 aa4.84□□□□□ -1.63
CLCN3-203ENST00000502998 A0A1W2PNR3 127 aa4.84□□□□□ -1.63
CLCN3-203ENST00000502998 TMEM223A0PJW6 202 aa4.84□□□□□ -1.63
CLCN3-203ENST00000502998 E7EQL1 145 aa4.84□□□□□ -1.63
CLCN3-203ENST00000502998 WNT9BO14905 357 aa4.84□□□□□ -1.63
CLCN3-203ENST00000502998 CIRBPQ14011 172 aaKnown RBP4.84□□□□□ -1.63
CLCN3-203ENST00000502998 Q1RN00 199 aa4.84□□□□□ -1.63
CLCN3-203ENST00000502998 DEFB134Q4QY38 66 aa4.84□□□□□ -1.63
CLCN3-203ENST00000502998 SPINK14Q6IE38 97 aa4.84□□□□□ -1.63
CLCN3-203ENST00000502998 VMO1Q7Z5L0 202 aa4.84□□□□□ -1.63
CLCN3-203ENST00000502998 LINC01356Q8N9X3 169 aa4.84□□□□□ -1.63
CLCN3-203ENST00000502998 FXYD5Q96DB9 178 aa4.84□□□□□ -1.63
CLCN3-203ENST00000502998 CCL13Q99616 98 aa4.84□□□□□ -1.63
CLCN3-203ENST00000502998 OVOL2Q9BRP0 275 aa4.84□□□□□ -1.63
CLCN3-203ENST00000502998 INTS1Q8N201 2190 aaKnown RBP4.83□□□□□ -1.64
CLCN3-203ENST00000502998 ADARB2-AS1A8MUL3 147 aa4.83□□□□□ -1.64
CLCN3-203ENST00000502998 C4orf51C9J302 202 aa4.83□□□□□ -1.64
CLCN3-203ENST00000502998 FAM229AH3BQW9 127 aa4.83□□□□□ -1.64
CLCN3-203ENST00000502998 ZNHIT1O43257 154 aa4.83□□□□□ -1.64
CLCN3-203ENST00000502998 IGKV1-5P01602 117 aa4.83□□□□□ -1.64
CLCN3-203ENST00000502998 MED14OSP0DP75 135 aa4.83□□□□□ -1.64
CLCN3-203ENST00000502998 COX6B1P14854 86 aa4.83□□□□□ -1.64
CLCN3-203ENST00000502998 UBE2AP49459 152 aa4.83□□□□□ -1.64
CLCN3-203ENST00000502998 MRPL51Q4U2R6 128 aaKnown RBP4.83□□□□□ -1.64
CLCN3-203ENST00000502998 ATP11AUNQ6ZP68 121 aa4.83□□□□□ -1.64
CLCN3-203ENST00000502998 NKAPP1Q8N9T2 125 aa4.83□□□□□ -1.64
CLCN3-203ENST00000502998 MPLKIPQ8TAP9 179 aa4.83□□□□□ -1.64
CLCN3-203ENST00000502998 DOCK7Q96N67 2140 aa4.82□□□□□ -1.64
CLCN3-203ENST00000502998 IGKV3D-11A0A0A0MRZ8 115 aa4.82□□□□□ -1.64
CLCN3-203ENST00000502998 IGKV1D-43A0A0B4J1Z2 117 aa4.82□□□□□ -1.64
CLCN3-203ENST00000502998 TRBV6-1A0A0K0K1D8 114 aa4.82□□□□□ -1.64
CLCN3-203ENST00000502998 F8WEM9 126 aa4.82□□□□□ -1.64
CLCN3-203ENST00000502998 C19orf84I3L1E1 186 aa4.82□□□□□ -1.64
CLCN3-203ENST00000502998 COX7A2LO14548 114 aa4.82□□□□□ -1.64
CLCN3-203ENST00000502998 FUSP35637 526 aaKnown RBP eCLIP4.82□□□□□ -1.64
CLCN3-203ENST00000502998 MP68P56378 58 aa4.82□□□□□ -1.64
CLCN3-203ENST00000502998 KRTAP10-9P60411 292 aa4.82□□□□□ -1.64
CLCN3-203ENST00000502998 BLCAPP62952 87 aa4.82□□□□□ -1.64
CLCN3-203ENST00000502998 FAM19A3Q7Z5A8 133 aa4.82□□□□□ -1.64
CLCN3-203ENST00000502998 DIRC1Q969H9 104 aa4.82□□□□□ -1.64
CLCN3-203ENST00000502998 ESM1Q9NQ30 184 aa4.82□□□□□ -1.64
CLCN3-203ENST00000502998 CCL28Q9NRJ3 127 aa4.82□□□□□ -1.64
CLCN3-203ENST00000502998 ICOSQ9Y6W8 199 aa4.82□□□□□ -1.64
CLCN3-203ENST00000502998 SONP18583 2426 aaKnown RBP4.82□□□□□ -1.64
CLCN3-203ENST00000502998 IGKV1D-17A0A075B6S4 117 aa4.81□□□□□ -1.64
CLCN3-203ENST00000502998 LOC389332A0A1B0GUA5 103 aa4.81□□□□□ -1.64
CLCN3-203ENST00000502998 D6R8Y8 96 aa4.81□□□□□ -1.64
CLCN3-203ENST00000502998 TRIAP1O43715 76 aa4.81□□□□□ -1.64
CLCN3-203ENST00000502998 IGKV1-39P01597 117 aa4.81□□□□□ -1.64
CLCN3-203ENST00000502998 IGKV1D-39P04432 117 aa4.81□□□□□ -1.64
CLCN3-203ENST00000502998 PRSS2P07478 247 aa4.81□□□□□ -1.64
CLCN3-203ENST00000502998 P0C879 139 aa4.81□□□□□ -1.64
CLCN3-203ENST00000502998 DEFA4P12838 97 aa4.81□□□□□ -1.64
CLCN3-203ENST00000502998 CD24P25063 80 aa4.81□□□□□ -1.64
CLCN3-203ENST00000502998 RPS27P42677 84 aaKnown RBP4.81□□□□□ -1.64
CLCN3-203ENST00000502998 EIF4EBP1Q13541 118 aaPredicted RBP4.81□□□□□ -1.64
CLCN3-203ENST00000502998 PIK3CD-AS1Q5SR53 167 aa4.81□□□□□ -1.64
CLCN3-203ENST00000502998 DEFB126Q9BYW3 111 aa4.81□□□□□ -1.64
CLCN3-203ENST00000502998 FREM3P0C091 2139 aa4.81□□□□□ -1.64
CLCN3-203ENST00000502998 VPS13CQ709C8 3753 aa4.8□□□□□ -1.64
CLCN3-203ENST00000502998 LOC100131303A0A0U1RQF7 123 aa4.8□□□□□ -1.64
CLCN3-203ENST00000502998 ERC2-IT1O76042 136 aa4.8□□□□□ -1.64
CLCN3-203ENST00000502998 FGFBP3Q8TAT2 258 aa4.8□□□□□ -1.64
CLCN3-203ENST00000502998 SPRR3Q9UBC9 169 aa4.8□□□□□ -1.64
CLCN3-203ENST00000502998 ZANQ9Y493 2812 aa4.8□□□□□ -1.64
CLCN3-203ENST00000502998 DNAJC13O75165 2243 aa4.79□□□□□ -1.64
CLCN3-203ENST00000502998 IGKV1-9A0A0C4DH69 117 aa4.79□□□□□ -1.64
CLCN3-203ENST00000502998 PINLYPA6NC86 204 aa4.79□□□□□ -1.64
CLCN3-203ENST00000502998 E7EUB6 86 aa4.79□□□□□ -1.64
CLCN3-203ENST00000502998 COX7A2P2O60397 106 aa4.79□□□□□ -1.64
CLCN3-203ENST00000502998 SH2D1AO60880 128 aa4.79□□□□□ -1.64
CLCN3-203ENST00000502998 MIFP14174 115 aa4.79□□□□□ -1.64
CLCN3-203ENST00000502998 KIAA0087Q14695 138 aa4.79□□□□□ -1.64
CLCN3-203ENST00000502998 MIR17HGQ75NE6 70 aa4.79□□□□□ -1.64
CLCN3-203ENST00000502998 FAM216BQ8N7L0 139 aa4.79□□□□□ -1.64
CLCN3-203ENST00000502998 IGHV3OR16-10A0A075B7F0 116 aa4.78□□□□□ -1.64
CLCN3-203ENST00000502998 TRBV6-6A0A0A6YYG2 114 aa4.78□□□□□ -1.64
CLCN3-203ENST00000502998 IGKV1D-13A0A0B4J2D9 117 aa4.78□□□□□ -1.64
CLCN3-203ENST00000502998 A6NN06 94 aa4.78□□□□□ -1.64
CLCN3-203ENST00000502998 H0Y9J4 135 aa4.78□□□□□ -1.64
CLCN3-203ENST00000502998 NDUFA3O95167 84 aa4.78□□□□□ -1.64
CLCN3-203ENST00000502998 DNAL4O96015 105 aa4.78□□□□□ -1.64
CLCN3-203ENST00000502998 IGLV3-1P01715 115 aa4.78□□□□□ -1.64
CLCN3-203ENST00000502998 IGKV1-13P0DP09 117 aa4.78□□□□□ -1.64
CLCN3-203ENST00000502998 S100A4P26447 101 aaKnown RBP4.78□□□□□ -1.64
CLCN3-203ENST00000502998 CRIP3Q6Q6R5 217 aa4.78□□□□□ -1.64
CLCN3-203ENST00000502998 TTTY12Q9BZ98 90 aa4.78□□□□□ -1.64
CLCN3-203ENST00000502998 PHLDA3Q9Y5J5 127 aa4.78□□□□□ -1.64
CLCN3-203ENST00000502998 FBN1P35555 2871 aaKnown RBP4.78□□□□□ -1.64
CLCN3-203ENST00000502998 IGKV1D-42A0A075B6H8 117 aa4.77□□□□□ -1.65
CLCN3-203ENST00000502998 A0A0J9YX75 114 aa4.77□□□□□ -1.65
CLCN3-203ENST00000502998 KLLNB2CW77 178 aa4.77□□□□□ -1.65
CLCN3-203ENST00000502998 FSTL3O95633 263 aa4.77□□□□□ -1.65
CLCN3-203ENST00000502998 ARMS2P0C7Q2 107 aa4.77□□□□□ -1.65
CLCN3-203ENST00000502998 CD28P10747 220 aa4.77□□□□□ -1.65
CLCN3-203ENST00000502998 IGLV3-21P80748 117 aaPredicted RBP4.77□□□□□ -1.65
CLCN3-203ENST00000502998 SOSTDC1Q6X4U4 206 aa4.77□□□□□ -1.65
CLCN3-203ENST00000502998 GPHB5Q86YW7 130 aa4.77□□□□□ -1.65
CLCN3-203ENST00000502998 ZNF491Q8N8L2 437 aa4.77□□□□□ -1.65
CLCN3-203ENST00000502998 ITLN1Q8WWA0 313 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms