RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 CKS2P33552 79 aa16.87■□□□□ 0.29
LSM6-202ENST00000502781 TNP2Q05952 138 aa16.87■□□□□ 0.29
LSM6-202ENST00000502781 NDUFA5Q16718 116 aa16.87■□□□□ 0.29
LSM6-202ENST00000502781 MPV17L2Q567V2 206 aa16.87■□□□□ 0.29
LSM6-202ENST00000502781 TMEM243Q9BU79 118 aa16.87■□□□□ 0.29
LSM6-202ENST00000502781 RPS10P5Q9NQ39 176 aa16.87■□□□□ 0.29
LSM6-202ENST00000502781 TMEM262E9PQX1 116 aa16.86■□□□□ 0.29
LSM6-202ENST00000502781 SVBPQ8N300 66 aa16.86■□□□□ 0.29
LSM6-202ENST00000502781 PPBPP02775 128 aa16.85■□□□□ 0.29
LSM6-202ENST00000502781 AMTP48728 403 aa16.85■□□□□ 0.29
LSM6-202ENST00000502781 SUMO2P61956 95 aaKnown RBP16.85■□□□□ 0.29
LSM6-202ENST00000502781 D6R8Y8 96 aa16.84■□□□□ 0.29
LSM6-202ENST00000502781 SNAPINO95295 136 aa16.84■□□□□ 0.29
LSM6-202ENST00000502781 PMCHP20382 165 aa16.84■□□□□ 0.29
LSM6-202ENST00000502781 GAGE6Q13070 117 aa16.84■□□□□ 0.29
LSM6-202ENST00000502781 ATRAIDQ6UW56 229 aa16.84■□□□□ 0.29
LSM6-202ENST00000502781 C20orf78Q9BR46 151 aa16.84■□□□□ 0.29
LSM6-202ENST00000502781 S100PP25815 95 aa16.83■□□□□ 0.28
LSM6-202ENST00000502781 ELOBQ15370 118 aa16.83■□□□□ 0.28
LSM6-202ENST00000502781 KLK12Q9UKR0 248 aa16.83■□□□□ 0.28
LSM6-202ENST00000502781 VCYO14598 125 aa16.82■□□□□ 0.28
LSM6-202ENST00000502781 PHOX2AO14813 284 aa16.82■□□□□ 0.28
LSM6-202ENST00000502781 TNFRSF6BO95407 300 aa16.82■□□□□ 0.28
LSM6-202ENST00000502781 TSHBP01222 138 aa16.82■□□□□ 0.28
LSM6-202ENST00000502781 RBX1P62877 108 aa16.82■□□□□ 0.28
LSM6-202ENST00000502781 RPL32P62910 135 aaKnown RBP16.82■□□□□ 0.28
LSM6-202ENST00000502781 SLC7A5P1Q8MH63 180 aa16.82■□□□□ 0.28
LSM6-202ENST00000502781 Q8N976 141 aa16.82■□□□□ 0.28
LSM6-202ENST00000502781 TRAV8-3A0A0A6YYJ7 113 aa16.81■□□□□ 0.28
LSM6-202ENST00000502781 A0A1B0GUV1 79 aa16.81■□□□□ 0.28
LSM6-202ENST00000502781 TMEM136Q6ZRR5 245 aa16.81■□□□□ 0.28
LSM6-202ENST00000502781 ORMDL3Q8N138 153 aa16.81■□□□□ 0.28
LSM6-202ENST00000502781 NPYP01303 97 aa16.8■□□□□ 0.28
LSM6-202ENST00000502781 APCSP02743 223 aa16.8■□□□□ 0.28
LSM6-202ENST00000502781 Q9HAA7 133 aa16.8■□□□□ 0.28
LSM6-202ENST00000502781 HECTD4Q9Y4D8 3996 aa16.8■□□□□ 0.28
LSM6-202ENST00000502781 ESDP10768 282 aa16.79■□□□□ 0.28
LSM6-202ENST00000502781 H7C423 109 aa16.77■□□□□ 0.28
LSM6-202ENST00000502781 PRELID3AQ96N28 172 aa16.77■□□□□ 0.28
LSM6-202ENST00000502781 ANGP03950 147 aaKnown RBP16.77■□□□□ 0.27
LSM6-202ENST00000502781 ENHOQ6UWT2 76 aa16.77■□□□□ 0.27
LSM6-202ENST00000502781 UBE2WQ96B02 151 aa16.77■□□□□ 0.27
LSM6-202ENST00000502781 PRR34Q9NV39 138 aa16.77■□□□□ 0.27
LSM6-202ENST00000502781 LAMTOR2Q9Y2Q5 125 aa16.77■□□□□ 0.27
LSM6-202ENST00000502781 PKD1P98161 4303 aa16.76■□□□□ 0.27
LSM6-202ENST00000502781 UBE2L6O14933 153 aa16.76■□□□□ 0.27
LSM6-202ENST00000502781 C20orf203Q8NBC4 194 aa16.76■□□□□ 0.27
LSM6-202ENST00000502781 KIR2DL4Q99706 377 aa16.76■□□□□ 0.27
LSM6-202ENST00000502781 SMIM2Q9BVW6 85 aa16.76■□□□□ 0.27
LSM6-202ENST00000502781 IGLV4-60A0A075B6I1 120 aa16.75■□□□□ 0.27
LSM6-202ENST00000502781 PRSS47A8MTI9 375 aa16.75■□□□□ 0.27
LSM6-202ENST00000502781 Q0VG73 95 aa16.75■□□□□ 0.27
LSM6-202ENST00000502781 GNB1LQ9BYB4 327 aa16.75■□□□□ 0.27
LSM6-202ENST00000502781 DNAH11Q96DT5 4516 aa16.75■□□□□ 0.27
LSM6-202ENST00000502781 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.74■□□□□ 0.27
LSM6-202ENST00000502781 IGKV2-29A2NJV5 120 aaPredicted RBP16.74■□□□□ 0.27
LSM6-202ENST00000502781 HLA-DQA1P01909 254 aa16.74■□□□□ 0.27
LSM6-202ENST00000502781 COX19Q49B96 90 aa16.74■□□□□ 0.27
LSM6-202ENST00000502781 TM2D2Q9BX73 214 aa16.74■□□□□ 0.27
LSM6-202ENST00000502781 FCER1GP30273 86 aa16.72■□□□□ 0.27
LSM6-202ENST00000502781 LINC00269Q8N2A0 174 aa16.72■□□□□ 0.27
LSM6-202ENST00000502781 COX11Q9Y6N1 276 aa16.72■□□□□ 0.27
LSM6-202ENST00000502781 CRPP02741 224 aa16.71■□□□□ 0.27
LSM6-202ENST00000502781 FGF6P10767 208 aa16.71■□□□□ 0.27
LSM6-202ENST00000502781 RMI2Q96E14 147 aa16.71■□□□□ 0.27
LSM6-202ENST00000502781 A0A087WTM6 91 aa16.7■□□□□ 0.26
LSM6-202ENST00000502781 LRCOL1A6NCL2 159 aa16.7■□□□□ 0.26
LSM6-202ENST00000502781 TCAPO15273 167 aa16.7■□□□□ 0.26
LSM6-202ENST00000502781 PSCAO43653 123 aa16.7■□□□□ 0.26
LSM6-202ENST00000502781 MIAQ16674 131 aa16.7■□□□□ 0.26
LSM6-202ENST00000502781 BIRC6Q9NR09 4857 aa16.69■□□□□ 0.26
LSM6-202ENST00000502781 ZNF25P17030 456 aaPredicted RBP16.69■□□□□ 0.26
LSM6-202ENST00000502781 MRPL52Q86TS9 123 aaKnown RBP16.69■□□□□ 0.26
LSM6-202ENST00000502781 TGIF2-C20orf24A0A0A6YYL0 155 aa16.68■□□□□ 0.26
LSM6-202ENST00000502781 MT-ND6P03923 174 aa16.68■□□□□ 0.26
LSM6-202ENST00000502781 REG3AQ06141 175 aa16.68■□□□□ 0.26
LSM6-202ENST00000502781 AMMECR1LQ6DCA0 310 aa16.68■□□□□ 0.26
LSM6-202ENST00000502781 MAPKAPK5-AS1Q8N8E1 139 aa16.68■□□□□ 0.26
LSM6-202ENST00000502781 PKHD1P08F94 4074 aa16.67■□□□□ 0.26
LSM6-202ENST00000502781 IGKV2D-24A0A075B6R9 120 aa16.67■□□□□ 0.26
LSM6-202ENST00000502781 YPEL4Q96NS1 127 aa16.67■□□□□ 0.26
LSM6-202ENST00000502781 MAP1LC3AQ9H492 121 aa16.67■□□□□ 0.26
LSM6-202ENST00000502781 CLPSL2Q6UWE3 100 aa16.66■□□□□ 0.26
LSM6-202ENST00000502781 C1orf43Q9BWL3 253 aa16.66■□□□□ 0.26
LSM6-202ENST00000502781 KIAA1644Q3SXP7 199 aa16.65■□□□□ 0.26
LSM6-202ENST00000502781 RNASEKQ6P5S7 137 aaKnown RBP16.65■□□□□ 0.26
LSM6-202ENST00000502781 KRTAP26-1Q6PEX3 210 aa16.64■□□□□ 0.26
LSM6-202ENST00000502781 CSDC2Q9Y534 153 aaKnown RBP16.64■□□□□ 0.25
LSM6-202ENST00000502781 DYNC1H1Q14204 4646 aaKnown RBP16.63■□□□□ 0.25
LSM6-202ENST00000502781 EREGO14944 169 aa16.63■□□□□ 0.25
LSM6-202ENST00000502781 KRTAP10-2P60368 255 aa16.63■□□□□ 0.25
LSM6-202ENST00000502781 SPATA12Q7Z6I5 190 aa16.63■□□□□ 0.25
LSM6-202ENST00000502781 Q8N8P6 123 aa16.63■□□□□ 0.25
LSM6-202ENST00000502781 MRPL18Q9H0U6 180 aaKnown RBP16.63■□□□□ 0.25
LSM6-202ENST00000502781 UBE2D4Q9Y2X8 147 aa16.63■□□□□ 0.25
LSM6-202ENST00000502781 TRAV8-4A0A0B4J246 113 aa16.62■□□□□ 0.25
LSM6-202ENST00000502781 LOC389332A0A1B0GUA5 103 aa16.62■□□□□ 0.25
LSM6-202ENST00000502781 OR5A1Q8NGJ0 315 aa16.62■□□□□ 0.25
LSM6-202ENST00000502781 TIMM21Q9BVV7 248 aa16.62■□□□□ 0.25
LSM6-202ENST00000502781 WFDC2Q14508 124 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms