RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 LINC01006Q8NI28 216 aa10.73□□□□□ -0.69
NEAT1-201ENST00000499732 DCANP1Q8TF63 244 aa10.73□□□□□ -0.69
NEAT1-201ENST00000499732 C9orf85Q96MD7 179 aa10.73□□□□□ -0.69
NEAT1-201ENST00000499732 VCX2Q9H322 139 aa10.73□□□□□ -0.69
NEAT1-201ENST00000499732 IGKV3-7A0A075B6H7 116 aa10.72□□□□□ -0.69
NEAT1-201ENST00000499732 RPL39P62891 51 aaKnown RBP10.72□□□□□ -0.69
NEAT1-201ENST00000499732 C18orf65Q6ZTR6 163 aa10.72□□□□□ -0.69
NEAT1-201ENST00000499732 C10orf126Q8N4M7 172 aa10.72□□□□□ -0.69
NEAT1-201ENST00000499732 SYT8Q8NBV8 401 aa10.72□□□□□ -0.69
NEAT1-201ENST00000499732 WFDC12Q8WWY7 111 aa10.72□□□□□ -0.69
NEAT1-201ENST00000499732 F5H697 171 aa10.72□□□□□ -0.69
NEAT1-201ENST00000499732 TSPEAR-AS2P59090 65 aa10.72□□□□□ -0.69
NEAT1-201ENST00000499732 TMEM170BQ5T4T1 132 aa10.72□□□□□ -0.69
NEAT1-201ENST00000499732 SBSPONQ8IVN8 264 aa10.72□□□□□ -0.69
NEAT1-201ENST00000499732 ZNRF2Q8NHG8 242 aa10.72□□□□□ -0.69
NEAT1-201ENST00000499732 AMELXQ99217 191 aa10.72□□□□□ -0.69
NEAT1-201ENST00000499732 JPT2Q9H910 190 aa10.72□□□□□ -0.69
NEAT1-201ENST00000499732 A0A087WWL8 130 aa10.71□□□□□ -0.69
NEAT1-201ENST00000499732 J3QQQ9 107 aa10.71□□□□□ -0.69
NEAT1-201ENST00000499732 CFC1BP0CG36 223 aa10.71□□□□□ -0.69
NEAT1-201ENST00000499732 CFC1P0CG37 223 aa10.71□□□□□ -0.69
NEAT1-201ENST00000499732 LGALS3P17931 250 aaKnown RBP10.71□□□□□ -0.69
NEAT1-201ENST00000499732 HOXD3P31249 432 aaPredicted RBP10.71□□□□□ -0.69
NEAT1-201ENST00000499732 EMP1P54849 157 aa10.71□□□□□ -0.69
NEAT1-201ENST00000499732 SYNJ2BPP57105 145 aa10.71□□□□□ -0.69
NEAT1-201ENST00000499732 TEN1Q86WV5 123 aa10.71□□□□□ -0.69
NEAT1-201ENST00000499732 IGHV3-16A0A0C4DH30 117 aa10.7□□□□□ -0.7
NEAT1-201ENST00000499732 TRPT1Q86TN4 253 aaKnown RBP10.7□□□□□ -0.7
NEAT1-201ENST00000499732 PPDPFLQ8WWR9 84 aa10.7□□□□□ -0.7
NEAT1-201ENST00000499732 TRAV12-3A0A0B4J271 114 aa10.7□□□□□ -0.7
NEAT1-201ENST00000499732 LEPROTO15243 131 aa10.7□□□□□ -0.7
NEAT1-201ENST00000499732 DEFB136Q30KP8 78 aa10.7□□□□□ -0.7
NEAT1-201ENST00000499732 PRO1854Q9UHT4 67 aa10.7□□□□□ -0.7
NEAT1-201ENST00000499732 TCL1BO95988 128 aa10.69□□□□□ -0.7
NEAT1-201ENST00000499732 C4orf3Q8WVX3 66 aa10.69□□□□□ -0.7
NEAT1-201ENST00000499732 CDIP1Q9H305 208 aa10.69□□□□□ -0.7
NEAT1-201ENST00000499732 TMEM223A0PJW6 202 aa10.68□□□□□ -0.7
NEAT1-201ENST00000499732 M0QXV9 152 aa10.68□□□□□ -0.7
NEAT1-201ENST00000499732 M0QY20 66 aa10.68□□□□□ -0.7
NEAT1-201ENST00000499732 ZNF56Q15929 161 aa10.68□□□□□ -0.7
NEAT1-201ENST00000499732 MDFICQ9P1T7 246 aa10.68□□□□□ -0.7
NEAT1-201ENST00000499732 A8MWV9 139 aa10.68□□□□□ -0.7
NEAT1-201ENST00000499732 SLURP1P55000 103 aa10.68□□□□□ -0.7
NEAT1-201ENST00000499732 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.68□□□□□ -0.7
NEAT1-201ENST00000499732 A0A0B4J2C4 111 aa10.67□□□□□ -0.7
NEAT1-201ENST00000499732 A0A0J9YX75 114 aa10.67□□□□□ -0.7
NEAT1-201ENST00000499732 PROK1P58294 105 aa10.67□□□□□ -0.7
NEAT1-201ENST00000499732 FAM74A4Q5TZK3 123 aa10.67□□□□□ -0.7
NEAT1-201ENST00000499732 ZNF256Q9Y2P7 627 aaPredicted RBP10.67□□□□□ -0.7
NEAT1-201ENST00000499732 CRYBA4P53673 196 aa10.66□□□□□ -0.7
NEAT1-201ENST00000499732 SNRPD3P62318 126 aaKnown RBP10.66□□□□□ -0.7
NEAT1-201ENST00000499732 KHDC1LQ5JSQ8 128 aa10.66□□□□□ -0.7
NEAT1-201ENST00000499732 HIST2H2BDQ6DRA6 164 aa10.66□□□□□ -0.7
NEAT1-201ENST00000499732 SFTA2Q6UW10 78 aa10.66□□□□□ -0.7
NEAT1-201ENST00000499732 C20orf203Q8NBC4 194 aa10.66□□□□□ -0.7
NEAT1-201ENST00000499732 IGHV1OR15-1A0A075B7D0 117 aa10.65□□□□□ -0.7
NEAT1-201ENST00000499732 EDA2RQ9HAV5 297 aa10.65□□□□□ -0.7
NEAT1-201ENST00000499732 I3L3M4 83 aa10.65□□□□□ -0.71
NEAT1-201ENST00000499732 CD28P10747 220 aa10.65□□□□□ -0.71
NEAT1-201ENST00000499732 ZNF22P17026 224 aaPredicted RBP10.65□□□□□ -0.71
NEAT1-201ENST00000499732 CKS1BP61024 79 aa10.65□□□□□ -0.71
NEAT1-201ENST00000499732 Q8N1Y9 231 aa10.65□□□□□ -0.71
NEAT1-201ENST00000499732 CARD19Q96LW7 228 aa10.65□□□□□ -0.71
NEAT1-201ENST00000499732 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.64□□□□□ -0.71
NEAT1-201ENST00000499732 RHODO00212 210 aa10.64□□□□□ -0.71
NEAT1-201ENST00000499732 P0DMU3 169 aa10.64□□□□□ -0.71
NEAT1-201ENST00000499732 FAM231AP0DMU4 169 aa10.64□□□□□ -0.71
NEAT1-201ENST00000499732 FAM231CP0DMU5 169 aa10.64□□□□□ -0.71
NEAT1-201ENST00000499732 C3orf56Q8N813 242 aa10.64□□□□□ -0.71
NEAT1-201ENST00000499732 DUX3Q96PT4 197 aa10.64□□□□□ -0.71
NEAT1-201ENST00000499732 A4D1N5 150 aa10.63□□□□□ -0.71
NEAT1-201ENST00000499732 K7EQG2 157 aa10.63□□□□□ -0.71
NEAT1-201ENST00000499732 ZNF688P0C7X2 276 aa10.63□□□□□ -0.71
NEAT1-201ENST00000499732 SCGB1C2P0DMR2 95 aa10.63□□□□□ -0.71
NEAT1-201ENST00000499732 Q6ZUT4 128 aa10.63□□□□□ -0.71
NEAT1-201ENST00000499732 TMEM263Q8WUH6 116 aaKnown RBP10.63□□□□□ -0.71
NEAT1-201ENST00000499732 PTH2Q96A98 100 aa10.63□□□□□ -0.71
NEAT1-201ENST00000499732 TRGV11A0A075B6L2 103 aa10.63□□□□□ -0.71
NEAT1-201ENST00000499732 IGHV3-33P01772 117 aa10.63□□□□□ -0.71
NEAT1-201ENST00000499732 SPINK8P0C7L1 97 aa10.63□□□□□ -0.71
NEAT1-201ENST00000499732 FHL3Q13643 280 aa10.63□□□□□ -0.71
NEAT1-201ENST00000499732 C11orf44Q8N8P7 122 aa10.63□□□□□ -0.71
NEAT1-201ENST00000499732 DEFB104AQ8WTQ1 72 aa10.63□□□□□ -0.71
NEAT1-201ENST00000499732 CITED2Q99967 270 aaPredicted RBP10.63□□□□□ -0.71
NEAT1-201ENST00000499732 IGLV4-3A0A075B6K6 122 aa10.62□□□□□ -0.71
NEAT1-201ENST00000499732 TMEM262E9PQX1 116 aa10.62□□□□□ -0.71
NEAT1-201ENST00000499732 ANKRD29Q8N6D5 301 aa10.62□□□□□ -0.71
NEAT1-201ENST00000499732 PYGO1Q9Y3Y4 419 aa10.62□□□□□ -0.71
NEAT1-201ENST00000499732 TRAV12-2A0A075B6T6 113 aa10.61□□□□□ -0.71
NEAT1-201ENST00000499732 ERG28Q9UKR5 140 aa10.61□□□□□ -0.71
NEAT1-201ENST00000499732 TRAV2A0A0B4J234 112 aa10.61□□□□□ -0.71
NEAT1-201ENST00000499732 M0R2P5 195 aa10.61□□□□□ -0.71
NEAT1-201ENST00000499732 SLC25A20O43772 301 aa10.61□□□□□ -0.71
NEAT1-201ENST00000499732 OPRPNQ99935 248 aaPredicted RBP10.61□□□□□ -0.71
NEAT1-201ENST00000499732 PEMTQ9UBM1 199 aa10.61□□□□□ -0.71
NEAT1-201ENST00000499732 XGP55808 180 aa10.6□□□□□ -0.71
NEAT1-201ENST00000499732 RAX2Q96IS3 184 aa10.6□□□□□ -0.71
NEAT1-201ENST00000499732 LINC01600Q96MT4 127 aa10.6□□□□□ -0.71
NEAT1-201ENST00000499732 EIF4EBP3O60516 100 aaPredicted RBP10.59□□□□□ -0.71
NEAT1-201ENST00000499732 MT-ATP8P03928 68 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms