RNA–Protein interactions for RNA: ENST00000498579.5

ECM1-207, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 943 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-207ENST00000498579 AMTP48728 403 aa12.26□□□□□ -0.45
ECM1-207ENST00000498579 LINC01620Q4KN68 170 aa12.26□□□□□ -0.45
ECM1-207ENST00000498579 LINC00528Q8N1L1 170 aa12.26□□□□□ -0.45
ECM1-207ENST00000498579 CLRN3Q8NCR9 226 aa12.26□□□□□ -0.45
ECM1-207ENST00000498579 BORCS7Q96B45 105 aa12.26□□□□□ -0.45
ECM1-207ENST00000498579 EIF5A2Q9GZV4 153 aaKnown RBP12.26□□□□□ -0.45
ECM1-207ENST00000498579 CEBPGP53567 150 aa12.25□□□□□ -0.45
ECM1-207ENST00000498579 SCXQ7RTU7 201 aa12.25□□□□□ -0.45
ECM1-207ENST00000498579 C20orf203Q8NBC4 194 aa12.25□□□□□ -0.45
ECM1-207ENST00000498579 GTSF1Q8WW33 167 aa12.25□□□□□ -0.45
ECM1-207ENST00000498579 GATD1Q8NB37 220 aa12.24□□□□□ -0.45
ECM1-207ENST00000498579 NCR2O95944 276 aa12.23□□□□□ -0.45
ECM1-207ENST00000498579 FOXA3P55318 350 aaPredicted RBP12.23□□□□□ -0.45
ECM1-207ENST00000498579 SMIM7Q9BQ49 75 aa12.23□□□□□ -0.45
ECM1-207ENST00000498579 PRSS1P07477 247 aa12.22□□□□□ -0.45
ECM1-207ENST00000498579 KRTAP26-1Q6PEX3 210 aa12.22□□□□□ -0.45
ECM1-207ENST00000498579 FAM210AQ96ND0 272 aa12.22□□□□□ -0.45
ECM1-207ENST00000498579 IGLV4-60A0A075B6I1 120 aa12.21□□□□□ -0.45
ECM1-207ENST00000498579 TRAV26-2A0A0B4J265 109 aa12.21□□□□□ -0.45
ECM1-207ENST00000498579 GFRA4Q9GZZ7 299 aa12.21□□□□□ -0.45
ECM1-207ENST00000498579 IGLV10-54A0A075B6I4 117 aa12.2□□□□□ -0.46
ECM1-207ENST00000498579 FAM231BA6NCW3 169 aa12.2□□□□□ -0.46
ECM1-207ENST00000498579 ZNF727A8MUV8 499 aa12.2□□□□□ -0.46
ECM1-207ENST00000498579 H7C423 109 aa12.2□□□□□ -0.46
ECM1-207ENST00000498579 LINC01551Q86U37 167 aa12.2□□□□□ -0.46
ECM1-207ENST00000498579 CIRBP-AS1Q8TBR5 109 aa12.2□□□□□ -0.46
ECM1-207ENST00000498579 DEFB104AQ8WTQ1 72 aa12.2□□□□□ -0.46
ECM1-207ENST00000498579 TSKUQ8WUA8 353 aa12.2□□□□□ -0.46
ECM1-207ENST00000498579 APCSP02743 223 aa12.19□□□□□ -0.46
ECM1-207ENST00000498579 AMMECR1LQ6DCA0 310 aa12.19□□□□□ -0.46
ECM1-207ENST00000498579 C9orf163Q8N9P6 203 aa12.19□□□□□ -0.46
ECM1-207ENST00000498579 AP5S1Q9NUS5 200 aa12.19□□□□□ -0.46
ECM1-207ENST00000498579 RPL39LQ96EH5 51 aaKnown RBP12.18□□□□□ -0.46
ECM1-207ENST00000498579 OSTCQ9NRP0 149 aa12.18□□□□□ -0.46
ECM1-207ENST00000498579 MYCBP2O75592 4640 aa12.18□□□□□ -0.46
ECM1-207ENST00000498579 DMBT1Q9UGM3 2413 aaPredicted RBP12.17□□□□□ -0.46
ECM1-207ENST00000498579 A0A1B0GUT8 65 aa12.17□□□□□ -0.46
ECM1-207ENST00000498579 SDHAF1A6NFY7 115 aa12.17□□□□□ -0.46
ECM1-207ENST00000498579 HIGD1CA8MV81 97 aa12.17□□□□□ -0.46
ECM1-207ENST00000498579 CNBPP62633 177 aaKnown RBP12.17□□□□□ -0.46
ECM1-207ENST00000498579 CFAP161Q6P656 301 aa12.17□□□□□ -0.46
ECM1-207ENST00000498579 SRRM2Q9UQ35 2752 aaKnown RBP12.16□□□□□ -0.46
ECM1-207ENST00000498579 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.16□□□□□ -0.46
ECM1-207ENST00000498579 TRBV6-5A0A0K0K1A5 114 aa12.16□□□□□ -0.46
ECM1-207ENST00000498579 hDV102S1A0JD36 115 aa12.16□□□□□ -0.46
ECM1-207ENST00000498579 I3L3M4 83 aa12.16□□□□□ -0.46
ECM1-207ENST00000498579 FAM74A3Q4VXF1 159 aa12.16□□□□□ -0.46
ECM1-207ENST00000498579 SRP19P09132 144 aaKnown RBP12.15□□□□□ -0.46
ECM1-207ENST00000498579 ZNF25P17030 456 aaPredicted RBP12.15□□□□□ -0.46
ECM1-207ENST00000498579 PMCHP20382 165 aa12.15□□□□□ -0.46
ECM1-207ENST00000498579 RNASEKQ6P5S7 137 aaKnown RBP12.15□□□□□ -0.46
ECM1-207ENST00000498579 TMEM191AQ9H0A3 160 aa12.15□□□□□ -0.46
ECM1-207ENST00000498579 HERC1Q15751 4861 aa12.15□□□□□ -0.46
ECM1-207ENST00000498579 MRAP2Q96G30 205 aa12.14□□□□□ -0.47
ECM1-207ENST00000498579 ST20Q9HBF5 79 aa12.14□□□□□ -0.47
ECM1-207ENST00000498579 FLG2Q5D862 2391 aaPredicted RBP12.13□□□□□ -0.47
ECM1-207ENST00000498579 J3QL48 77 aa12.13□□□□□ -0.47
ECM1-207ENST00000498579 TMEM101Q96IK0 257 aa12.13□□□□□ -0.47
ECM1-207ENST00000498579 BTF3L4Q96K17 158 aa12.13□□□□□ -0.47
ECM1-207ENST00000498579 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.12□□□□□ -0.47
ECM1-207ENST00000498579 IGKV2-29A2NJV5 120 aaPredicted RBP12.12□□□□□ -0.47
ECM1-207ENST00000498579 PPP1R17O96001 155 aa12.12□□□□□ -0.47
ECM1-207ENST00000498579 FGF6P10767 208 aa12.12□□□□□ -0.47
ECM1-207ENST00000498579 RIGQ13278 110 aa12.12□□□□□ -0.47
ECM1-207ENST00000498579 TMEM241Q24JQ0 296 aa12.12□□□□□ -0.47
ECM1-207ENST00000498579 IGHV3-64A0A075B6Q5 118 aa12.11□□□□□ -0.47
ECM1-207ENST00000498579 IGKV3OR2-268A0A0C4DH90 116 aa12.11□□□□□ -0.47
ECM1-207ENST00000498579 GAGE12HA6NDE8 117 aa12.11□□□□□ -0.47
ECM1-207ENST00000498579 SDIM1Q6ZPB5 146 aa12.11□□□□□ -0.47
ECM1-207ENST00000498579 V9GYV3 84 aa12.11□□□□□ -0.47
ECM1-207ENST00000498579 ISOC2Q96AB3 205 aa12.1□□□□□ -0.47
ECM1-207ENST00000498579 SMDT1Q9H4I9 107 aa12.1□□□□□ -0.47
ECM1-207ENST00000498579 NAT8BQ9UHF3 227 aa12.1□□□□□ -0.47
ECM1-207ENST00000498579 KRTAP29-1A8MX34 341 aaPredicted RBP12.09□□□□□ -0.47
ECM1-207ENST00000498579 RAB4AP20338 218 aa12.09□□□□□ -0.47
ECM1-207ENST00000498579 PEA15Q15121 130 aa12.09□□□□□ -0.47
ECM1-207ENST00000498579 OR5A1Q8NGJ0 315 aa12.09□□□□□ -0.47
ECM1-207ENST00000498579 CHCHD10Q8WYQ3 142 aaPredicted RBP12.09□□□□□ -0.47
ECM1-207ENST00000498579 TRBV27A0A0K0K1C4 114 aa12.08□□□□□ -0.48
ECM1-207ENST00000498579 A0A1B0GVG6 124 aa12.08□□□□□ -0.48
ECM1-207ENST00000498579 ESDP10768 282 aa12.08□□□□□ -0.48
ECM1-207ENST00000498579 RPL37AP61513 92 aaKnown RBP12.08□□□□□ -0.48
ECM1-207ENST00000498579 AMN1Q8IY45 258 aa12.08□□□□□ -0.48
ECM1-207ENST00000498579 NUP35Q8NFH5 326 aa12.08□□□□□ -0.48
ECM1-207ENST00000498579 RNF185Q96GF1 192 aa12.08□□□□□ -0.48
ECM1-207ENST00000498579 NAT8Q9UHE5 227 aa12.08□□□□□ -0.48
ECM1-207ENST00000498579 TSHBP01222 138 aa12.07□□□□□ -0.48
ECM1-207ENST00000498579 POLR2KP53803 58 aaKnown RBP12.07□□□□□ -0.48
ECM1-207ENST00000498579 RPL23P62829 140 aaKnown RBP12.07□□□□□ -0.48
ECM1-207ENST00000498579 SMAGPQ0VAQ4 97 aa12.07□□□□□ -0.48
ECM1-207ENST00000498579 ADIRFQ15847 76 aa12.07□□□□□ -0.48
ECM1-207ENST00000498579 TMEM242Q9NWH2 141 aa12.07□□□□□ -0.48
ECM1-207ENST00000498579 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.07□□□□□ -0.48
ECM1-207ENST00000498579 C7orf77A4D0Y5 90 aa12.06□□□□□ -0.48
ECM1-207ENST00000498579 KRTAP10-4P60372 401 aaPredicted RBP12.06□□□□□ -0.48
ECM1-207ENST00000498579 CIRBPQ14011 172 aaKnown RBP12.06□□□□□ -0.48
ECM1-207ENST00000498579 C15orf56Q8N910 161 aa12.06□□□□□ -0.48
ECM1-207ENST00000498579 A0A1B0GW15 77 aa12.05□□□□□ -0.48
ECM1-207ENST00000498579 VCYO14598 125 aa12.05□□□□□ -0.48
ECM1-207ENST00000498579 PPP1R2P9O14990 202 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms