RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 TRBV6-5A0A0K0K1A5 114 aa8.49□□□□□ -1.05
HSPG2-213ENST00000498495 I3L3M4 83 aa8.49□□□□□ -1.05
HSPG2-213ENST00000498495 PPP1R2P9O14990 202 aa8.49□□□□□ -1.05
HSPG2-213ENST00000498495 CDK2AP2O75956 126 aa8.49□□□□□ -1.05
HSPG2-213ENST00000498495 CAMPP49913 170 aa8.49□□□□□ -1.05
HSPG2-213ENST00000498495 PNRC1Q12796 327 aaPredicted RBP8.49□□□□□ -1.05
HSPG2-213ENST00000498495 LINC00269Q8N2A0 174 aa8.49□□□□□ -1.05
HSPG2-213ENST00000498495 NTN5Q8WTR8 489 aaPredicted RBP8.49□□□□□ -1.05
HSPG2-213ENST00000498495 MRAP2Q96G30 205 aa8.49□□□□□ -1.05
HSPG2-213ENST00000498495 ST20Q9HBF5 79 aa8.49□□□□□ -1.05
HSPG2-213ENST00000498495 PKHD1P08F94 4074 aa8.48□□□□□ -1.05
HSPG2-213ENST00000498495 A0A1B0GUV1 79 aa8.48□□□□□ -1.05
HSPG2-213ENST00000498495 A0A1B0GW15 77 aa8.48□□□□□ -1.05
HSPG2-213ENST00000498495 LECT2O14960 151 aa8.48□□□□□ -1.05
HSPG2-213ENST00000498495 GAS8-AS1O95177 125 aa8.48□□□□□ -1.05
HSPG2-213ENST00000498495 NCR2O95944 276 aa8.48□□□□□ -1.05
HSPG2-213ENST00000498495 GCSHP23434 173 aa8.48□□□□□ -1.05
HSPG2-213ENST00000498495 MIAQ16674 131 aa8.48□□□□□ -1.05
HSPG2-213ENST00000498495 PPP1R17O96001 155 aa8.47□□□□□ -1.05
HSPG2-213ENST00000498495 APCSP02743 223 aa8.47□□□□□ -1.05
HSPG2-213ENST00000498495 FAM104BQ5XKR9 115 aa8.47□□□□□ -1.05
HSPG2-213ENST00000498495 CLPSL2Q6UWE3 100 aa8.47□□□□□ -1.05
HSPG2-213ENST00000498495 C20orf203Q8NBC4 194 aa8.47□□□□□ -1.05
HSPG2-213ENST00000498495 ANAPC16Q96DE5 110 aa8.47□□□□□ -1.05
HSPG2-213ENST00000498495 PRR34Q9NV39 138 aa8.47□□□□□ -1.05
HSPG2-213ENST00000498495 IGLV4-60A0A075B6I1 120 aa8.46□□□□□ -1.06
HSPG2-213ENST00000498495 SMKR1H3BMG3 65 aa8.46□□□□□ -1.06
HSPG2-213ENST00000498495 MT-ND4LP03901 98 aa8.46□□□□□ -1.06
HSPG2-213ENST00000498495 S100A8P05109 93 aa8.46□□□□□ -1.06
HSPG2-213ENST00000498495 RPS10P46783 165 aaKnown RBP8.46□□□□□ -1.06
HSPG2-213ENST00000498495 REG3AQ06141 175 aa8.46□□□□□ -1.06
HSPG2-213ENST00000498495 WFDC2Q14508 124 aa8.46□□□□□ -1.06
HSPG2-213ENST00000498495 MRPL54Q6P161 138 aaKnown RBP8.46□□□□□ -1.06
HSPG2-213ENST00000498495 UQCC3Q6UW78 93 aa8.46□□□□□ -1.06
HSPG2-213ENST00000498495 TMEM70Q9BUB7 260 aa8.46□□□□□ -1.06
HSPG2-213ENST00000498495 LINC00862A6NCI5 91 aa8.45□□□□□ -1.06
HSPG2-213ENST00000498495 F8W036 122 aa8.45□□□□□ -1.06
HSPG2-213ENST00000498495 H7C423 109 aa8.45□□□□□ -1.06
HSPG2-213ENST00000498495 VCYO14598 125 aa8.45□□□□□ -1.06
HSPG2-213ENST00000498495 POLR2KP53803 58 aaKnown RBP8.45□□□□□ -1.06
HSPG2-213ENST00000498495 HBBP68871 147 aa8.45□□□□□ -1.06
HSPG2-213ENST00000498495 MRPL51Q4U2R6 128 aaKnown RBP8.45□□□□□ -1.06
HSPG2-213ENST00000498495 AMMECR1LQ6DCA0 310 aa8.45□□□□□ -1.06
HSPG2-213ENST00000498495 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.44□□□□□ -1.06
HSPG2-213ENST00000498495 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.44□□□□□ -1.06
HSPG2-213ENST00000498495 TRAV8-4A0A0B4J246 113 aa8.44□□□□□ -1.06
HSPG2-213ENST00000498495 IGKV2-29A2NJV5 120 aaPredicted RBP8.44□□□□□ -1.06
HSPG2-213ENST00000498495 CKS2P33552 79 aa8.44□□□□□ -1.06
HSPG2-213ENST00000498495 KRTAP10-1P60331 282 aa8.44□□□□□ -1.06
HSPG2-213ENST00000498495 RNASEKQ6P5S7 137 aaKnown RBP8.44□□□□□ -1.06
HSPG2-213ENST00000498495 KIAA1109Q2LD37 5005 aa8.44□□□□□ -1.06
HSPG2-213ENST00000498495 IGLV10-54A0A075B6I4 117 aa8.43□□□□□ -1.06
HSPG2-213ENST00000498495 TRBV27A0A0K0K1C4 114 aa8.43□□□□□ -1.06
HSPG2-213ENST00000498495 TMEM218A2RU14 115 aa8.43□□□□□ -1.06
HSPG2-213ENST00000498495 HLA-DQA1P01909 254 aa8.43□□□□□ -1.06
HSPG2-213ENST00000498495 SUMO2P61956 95 aaKnown RBP8.43□□□□□ -1.06
HSPG2-213ENST00000498495 NRACQ8N912 160 aa8.43□□□□□ -1.06
HSPG2-213ENST00000498495 TMEM242Q9NWH2 141 aa8.43□□□□□ -1.06
HSPG2-213ENST00000498495 A0A1B0GXF2 115 aa8.42□□□□□ -1.06
HSPG2-213ENST00000498495 TSHBP01222 138 aa8.42□□□□□ -1.06
HSPG2-213ENST00000498495 FGF6P10767 208 aa8.42□□□□□ -1.06
HSPG2-213ENST00000498495 ESDP10768 282 aa8.42□□□□□ -1.06
HSPG2-213ENST00000498495 C14orf177Q52M58 125 aa8.42□□□□□ -1.06
HSPG2-213ENST00000498495 ATP5L2Q7Z4Y8 100 aa8.42□□□□□ -1.06
HSPG2-213ENST00000498495 BTF3L4Q96K17 158 aa8.42□□□□□ -1.06
HSPG2-213ENST00000498495 KIR2DL4Q99706 377 aa8.42□□□□□ -1.06
HSPG2-213ENST00000498495 LRP1BQ9NZR2 4599 aa8.42□□□□□ -1.06
HSPG2-213ENST00000498495 IGKV3OR2-268A0A0C4DH90 116 aa8.41□□□□□ -1.06
HSPG2-213ENST00000498495 FCER1GP30273 86 aa8.41□□□□□ -1.06
HSPG2-213ENST00000498495 TMEM101Q96IK0 257 aa8.41□□□□□ -1.06
HSPG2-213ENST00000498495 C20orf78Q9BR46 151 aa8.41□□□□□ -1.06
HSPG2-213ENST00000498495 TRBV24-1A0A075B6N3 115 aa8.4□□□□□ -1.06
HSPG2-213ENST00000498495 USP17L23D6RBM5 183 aa8.4□□□□□ -1.06
HSPG2-213ENST00000498495 TNFRSF6BO95407 300 aa8.4□□□□□ -1.06
HSPG2-213ENST00000498495 PPBPP02775 128 aa8.4□□□□□ -1.06
HSPG2-213ENST00000498495 ZNF25P17030 456 aaPredicted RBP8.4□□□□□ -1.06
HSPG2-213ENST00000498495 KRTAP26-1Q6PEX3 210 aa8.4□□□□□ -1.06
HSPG2-213ENST00000498495 COMMD7Q86VX2 200 aa8.4□□□□□ -1.06
HSPG2-213ENST00000498495 DNAH5Q8TE73 4624 aa8.4□□□□□ -1.07
HSPG2-213ENST00000498495 C7orf77A4D0Y5 90 aa8.39□□□□□ -1.07
HSPG2-213ENST00000498495 D6R8Y8 96 aa8.39□□□□□ -1.07
HSPG2-213ENST00000498495 ADCYAP1P18509 176 aa8.39□□□□□ -1.07
HSPG2-213ENST00000498495 XGP55808 180 aa8.39□□□□□ -1.07
HSPG2-213ENST00000498495 DGAT2L7PQ6IED9 249 aa8.39□□□□□ -1.07
HSPG2-213ENST00000498495 SEC11CQ9BY50 192 aa8.39□□□□□ -1.07
HSPG2-213ENST00000498495 HERC2O95714 4834 aa8.39□□□□□ -1.07
HSPG2-213ENST00000498495 SMAGPQ0VAQ4 97 aa8.38□□□□□ -1.07
HSPG2-213ENST00000498495 TMEM136Q6ZRR5 245 aa8.38□□□□□ -1.07
HSPG2-213ENST00000498495 OR5A1Q8NGJ0 315 aa8.38□□□□□ -1.07
HSPG2-213ENST00000498495 IMMP2LQ96T52 175 aa8.38□□□□□ -1.07
HSPG2-213ENST00000498495 CTDSP1Q9GZU7 261 aa8.38□□□□□ -1.07
HSPG2-213ENST00000498495 PHOX2AO14813 284 aa8.37□□□□□ -1.07
HSPG2-213ENST00000498495 TCAPO15273 167 aa8.37□□□□□ -1.07
HSPG2-213ENST00000498495 RPL32P62910 135 aaKnown RBP8.37□□□□□ -1.07
HSPG2-213ENST00000498495 ORMDL3Q8N138 153 aa8.37□□□□□ -1.07
HSPG2-213ENST00000498495 Q8N1X5 172 aa8.37□□□□□ -1.07
HSPG2-213ENST00000498495 CLRN3Q8NCR9 226 aa8.37□□□□□ -1.07
HSPG2-213ENST00000498495 TMEM18Q96B42 140 aa8.37□□□□□ -1.07
HSPG2-213ENST00000498495 GAGE12HA6NDE8 117 aa8.36□□□□□ -1.07
HSPG2-213ENST00000498495 NPYP01303 97 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms