RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 LYPD6BQ8NI32 183 aa5.55□□□□□ -1.52
HMGXB4-207ENST00000498212 NIT2Q9NQR4 276 aa5.55□□□□□ -1.52
HMGXB4-207ENST00000498212 PRR34Q9NV39 138 aa5.55□□□□□ -1.52
HMGXB4-207ENST00000498212 LINC00269Q8N2A0 174 aa5.54□□□□□ -1.52
HMGXB4-207ENST00000498212 PGLYRP4Q96LB8 373 aa5.54□□□□□ -1.52
HMGXB4-207ENST00000498212 TMEM243Q9BU79 118 aa5.54□□□□□ -1.52
HMGXB4-207ENST00000498212 CNFNQ9BYD5 112 aa5.54□□□□□ -1.52
HMGXB4-207ENST00000498212 USP17L23D6RBM5 183 aa5.53□□□□□ -1.52
HMGXB4-207ENST00000498212 GATCO43716 136 aaKnown RBP5.53□□□□□ -1.52
HMGXB4-207ENST00000498212 CEBPGP53567 150 aa5.53□□□□□ -1.52
HMGXB4-207ENST00000498212 REG3AQ06141 175 aa5.53□□□□□ -1.52
HMGXB4-207ENST00000498212 COTL1Q14019 142 aa5.53□□□□□ -1.52
HMGXB4-207ENST00000498212 FAM231DQ6ZW35 169 aa5.53□□□□□ -1.52
HMGXB4-207ENST00000498212 TRAV26-2A0A0B4J265 109 aa5.52□□□□□ -1.53
HMGXB4-207ENST00000498212 A0A1B0GUV1 79 aa5.52□□□□□ -1.53
HMGXB4-207ENST00000498212 A8MWL6 223 aa5.52□□□□□ -1.53
HMGXB4-207ENST00000498212 UBE2L6O14933 153 aa5.52□□□□□ -1.53
HMGXB4-207ENST00000498212 PLA2G1BP04054 148 aaKnown RBP5.52□□□□□ -1.53
HMGXB4-207ENST00000498212 AMTP48728 403 aa5.52□□□□□ -1.53
HMGXB4-207ENST00000498212 KRTAP26-1Q6PEX3 210 aa5.52□□□□□ -1.53
HMGXB4-207ENST00000498212 SCXQ7RTU7 201 aa5.52□□□□□ -1.53
HMGXB4-207ENST00000498212 SMIM15Q7Z3B0 74 aa5.52□□□□□ -1.53
HMGXB4-207ENST00000498212 GATD1Q8NB37 220 aa5.52□□□□□ -1.53
HMGXB4-207ENST00000498212 C20orf203Q8NBC4 194 aa5.52□□□□□ -1.53
HMGXB4-207ENST00000498212 DEFB104AQ8WTQ1 72 aa5.52□□□□□ -1.53
HMGXB4-207ENST00000498212 GTSF1Q8WW33 167 aa5.52□□□□□ -1.53
HMGXB4-207ENST00000498212 KRTAP4-7Q9BYR0 210 aa5.52□□□□□ -1.53
HMGXB4-207ENST00000498212 EIF5A2Q9GZV4 153 aaKnown RBP5.52□□□□□ -1.53
HMGXB4-207ENST00000498212 IGLV4-60A0A075B6I1 120 aa5.51□□□□□ -1.53
HMGXB4-207ENST00000498212 IGLV10-54A0A075B6I4 117 aa5.51□□□□□ -1.53
HMGXB4-207ENST00000498212 TRAV8-4A0A0B4J246 113 aa5.51□□□□□ -1.53
HMGXB4-207ENST00000498212 CT83Q5H943 113 aa5.51□□□□□ -1.53
HMGXB4-207ENST00000498212 FAM210AQ96ND0 272 aa5.51□□□□□ -1.53
HMGXB4-207ENST00000498212 SMIM7Q9BQ49 75 aa5.51□□□□□ -1.53
HMGXB4-207ENST00000498212 CHAC1Q9BUX1 264 aa5.51□□□□□ -1.53
HMGXB4-207ENST00000498212 NDUFS6O75380 124 aaKnown RBP5.5□□□□□ -1.53
HMGXB4-207ENST00000498212 PRSS1P07477 247 aa5.5□□□□□ -1.53
HMGXB4-207ENST00000498212 FOXA3P55318 350 aaPredicted RBP5.5□□□□□ -1.53
HMGXB4-207ENST00000498212 LCE1DQ5T752 114 aa5.5□□□□□ -1.53
HMGXB4-207ENST00000498212 DGAT2L7PQ6IED9 249 aa5.5□□□□□ -1.53
HMGXB4-207ENST00000498212 TEX261Q6UWH6 196 aa5.5□□□□□ -1.53
HMGXB4-207ENST00000498212 LINC01551Q86U37 167 aa5.5□□□□□ -1.53
HMGXB4-207ENST00000498212 BORCS7Q96B45 105 aa5.5□□□□□ -1.53
HMGXB4-207ENST00000498212 RPL39LQ96EH5 51 aaKnown RBP5.5□□□□□ -1.53
HMGXB4-207ENST00000498212 FAT1Q14517 4588 aa5.5□□□□□ -1.53
HMGXB4-207ENST00000498212 A0A1B0GVG6 124 aa5.49□□□□□ -1.53
HMGXB4-207ENST00000498212 ZNF727A8MUV8 499 aa5.49□□□□□ -1.53
HMGXB4-207ENST00000498212 NCR2O95944 276 aa5.49□□□□□ -1.53
HMGXB4-207ENST00000498212 SRP19P09132 144 aaKnown RBP5.49□□□□□ -1.53
HMGXB4-207ENST00000498212 CLRN3Q8NCR9 226 aa5.49□□□□□ -1.53
HMGXB4-207ENST00000498212 CIRBP-AS1Q8TBR5 109 aa5.49□□□□□ -1.53
HMGXB4-207ENST00000498212 TSKUQ8WUA8 353 aa5.49□□□□□ -1.53
HMGXB4-207ENST00000498212 GFRA4Q9GZZ7 299 aa5.49□□□□□ -1.53
HMGXB4-207ENST00000498212 A0A1B0GUT8 65 aa5.48□□□□□ -1.53
HMGXB4-207ENST00000498212 SDHAF1A6NFY7 115 aa5.48□□□□□ -1.53
HMGXB4-207ENST00000498212 HIGD1CA8MV81 97 aa5.48□□□□□ -1.53
HMGXB4-207ENST00000498212 APCSP02743 223 aa5.48□□□□□ -1.53
HMGXB4-207ENST00000498212 AMMECR1LQ6DCA0 310 aa5.48□□□□□ -1.53
HMGXB4-207ENST00000498212 C9orf163Q8N9P6 203 aa5.48□□□□□ -1.53
HMGXB4-207ENST00000498212 OSTCQ9NRP0 149 aa5.48□□□□□ -1.53
HMGXB4-207ENST00000498212 DNAH8Q96JB1 4490 aa5.48□□□□□ -1.53
HMGXB4-207ENST00000498212 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.47□□□□□ -1.53
HMGXB4-207ENST00000498212 IGKV3OR2-268A0A0C4DH90 116 aa5.47□□□□□ -1.53
HMGXB4-207ENST00000498212 TRBV6-5A0A0K0K1A5 114 aa5.47□□□□□ -1.53
HMGXB4-207ENST00000498212 hDV102S1A0JD36 115 aa5.47□□□□□ -1.53
HMGXB4-207ENST00000498212 IGKV2-29A2NJV5 120 aaPredicted RBP5.47□□□□□ -1.53
HMGXB4-207ENST00000498212 FAM231BA6NCW3 169 aa5.47□□□□□ -1.53
HMGXB4-207ENST00000498212 H7C423 109 aa5.47□□□□□ -1.53
HMGXB4-207ENST00000498212 PMCHP20382 165 aa5.47□□□□□ -1.53
HMGXB4-207ENST00000498212 RNASEKQ6P5S7 137 aaKnown RBP5.47□□□□□ -1.53
HMGXB4-207ENST00000498212 TMEM191AQ9H0A3 160 aa5.47□□□□□ -1.53
HMGXB4-207ENST00000498212 VPS13BQ7Z7G8 4022 aa5.46□□□□□ -1.53
HMGXB4-207ENST00000498212 I3L3M4 83 aa5.46□□□□□ -1.54
HMGXB4-207ENST00000498212 FGF6P10767 208 aa5.46□□□□□ -1.54
HMGXB4-207ENST00000498212 CNBPP62633 177 aaKnown RBP5.46□□□□□ -1.54
HMGXB4-207ENST00000498212 TMEM241Q24JQ0 296 aa5.46□□□□□ -1.54
HMGXB4-207ENST00000498212 FAM74A3Q4VXF1 159 aa5.46□□□□□ -1.54
HMGXB4-207ENST00000498212 RNF185Q96GF1 192 aa5.46□□□□□ -1.54
HMGXB4-207ENST00000498212 ST20Q9HBF5 79 aa5.46□□□□□ -1.54
HMGXB4-207ENST00000498212 AP5S1Q9NUS5 200 aa5.46□□□□□ -1.54
HMGXB4-207ENST00000498212 V9GYV3 84 aa5.46□□□□□ -1.54
HMGXB4-207ENST00000498212 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.45□□□□□ -1.54
HMGXB4-207ENST00000498212 GAGE12HA6NDE8 117 aa5.45□□□□□ -1.54
HMGXB4-207ENST00000498212 GAS8-AS1O95177 125 aa5.45□□□□□ -1.54
HMGXB4-207ENST00000498212 ZNF25P17030 456 aaPredicted RBP5.45□□□□□ -1.54
HMGXB4-207ENST00000498212 RAB4AP20338 218 aa5.45□□□□□ -1.54
HMGXB4-207ENST00000498212 RPL23P62829 140 aaKnown RBP5.45□□□□□ -1.54
HMGXB4-207ENST00000498212 RIGQ13278 110 aa5.45□□□□□ -1.54
HMGXB4-207ENST00000498212 CFAP161Q6P656 301 aa5.45□□□□□ -1.54
HMGXB4-207ENST00000498212 SDIM1Q6ZPB5 146 aa5.45□□□□□ -1.54
HMGXB4-207ENST00000498212 AMN1Q8IY45 258 aa5.45□□□□□ -1.54
HMGXB4-207ENST00000498212 ISOC2Q96AB3 205 aa5.45□□□□□ -1.54
HMGXB4-207ENST00000498212 MRAP2Q96G30 205 aa5.45□□□□□ -1.54
HMGXB4-207ENST00000498212 BTF3L4Q96K17 158 aa5.45□□□□□ -1.54
HMGXB4-207ENST00000498212 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.45□□□□□ -1.54
HMGXB4-207ENST00000498212 SRRM2Q9UQ35 2752 aaKnown RBP5.44□□□□□ -1.54
HMGXB4-207ENST00000498212 FLG2Q5D862 2391 aaPredicted RBP5.44□□□□□ -1.54
HMGXB4-207ENST00000498212 IGHV3-64A0A075B6Q5 118 aa5.44□□□□□ -1.54
HMGXB4-207ENST00000498212 TSHBP01222 138 aa5.44□□□□□ -1.54
HMGXB4-207ENST00000498212 ESDP10768 282 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms