RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 CFAP47Q6ZTR5 3102 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 IGLV2-33A0A075B6J2 118 aaPredicted RBP0.93□□□□□ -2.26
XRN1-214ENST00000498077 LY6G6EA0A0G2JKS1 128 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 VGLL3A8MV65 326 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 A8MWV9 139 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 H3BSH0 61 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 LST1O00453 97 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 AKAIN1P0CW23 69 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 C10orf113Q5VZT2 155 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 NCBP2-AS2Q69YL0 99 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 LINC01006Q8NI28 216 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 FAM57AQ8TBR7 257 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 FAM210AQ96ND0 272 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 VAPAQ9P0L0 249 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 MRM2Q9UI43 246 aaKnown RBP0.93□□□□□ -2.26
XRN1-214ENST00000498077 OBSL1O75147 1896 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 PLXNA4Q9HCM2 1894 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 SPRR5A0A1B0GTR4 108 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 A0A1B0GU69 56 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 LOC107986453A0A1B0GWG9 222 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 CLDN6P56747 220 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 DEFB135Q30KP9 77 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 CXCL17Q6UXB2 119 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 C11orf40Q8WZ69 217 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 S100A13Q99584 98 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 COPZ2Q9P299 210 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 PRO0628Q9UI54 55 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 CFAP54Q96N23 3096 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 IGLV3-12A0A075B6K2 115 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 TRBV7-6A0A0J9YX20 115 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 NDUFB1O75438 58 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 STAG3L3P0CL85 134 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 MRPL51Q4U2R6 128 aaKnown RBP0.93□□□□□ -2.26
XRN1-214ENST00000498077 TEX47Q8TBZ9 253 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 POP5Q969H6 163 aaKnown RBP0.93□□□□□ -2.26
XRN1-214ENST00000498077 KRTAP2-2Q9BYT5 123 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 KRTAP2-1Q9BYU5 128 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 PSG8Q9UQ74 426 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 OR51B2Q9Y5P1 312 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 DSPPQ9NZW4 1301 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 A0A1W2PPR1 153 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 ANKRD20A5PA0PJZ0 165 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 TMEM14DPA8MWL7 114 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 C16orf90A8MZG2 172 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 PLA2G10O15496 165 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 OR1F1O43749 312 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 S100A11P31949 105 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 GABRA4P48169 554 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 FAM27BQ5VT28 67 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 PFN4Q8NHR9 129 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 SMIM19Q96E16 107 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 FCRL1Q96LA6 429 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 LINC00052Q96N35 136 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 SPRR2GQ9BYE4 73 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 COL27A1Q8IZC6 1860 aaPredicted RBP0.93□□□□□ -2.26
XRN1-214ENST00000498077 THADAQ6YHU6 1953 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 PCNX3Q9H6A9 2034 aa0.93□□□□□ -2.26
XRN1-214ENST00000498077 IQCF5A8MTL0 148 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 NDUFA7O95182 113 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 IFITM2Q01629 132 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 LTC4SQ16873 150 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 PSMG4Q5JS54 123 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 LELP1Q5T871 98 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 ZNF720Q7Z2F6 126 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 NDUFA11Q86Y39 141 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 SMIM20Q8N5G0 67 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 OR10D3Q8NH80 312 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 COPS9Q8WXC6 57 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 MGST2Q99735 147 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 KIAA1549LQ6ZVL6 1849 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 DNAH6Q9C0G6 4158 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 IGLV3-32A0A0A0MS00 114 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 C9JCJ5 164 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 TAX1BP3O14907 124 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 TNFSF15O95150 251 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 SAA2P0DJI9 122 aaPredicted RBP0.92□□□□□ -2.26
XRN1-214ENST00000498077 PTHLHP12272 177 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 CXCL2P19875 107 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 HIST1H2BOP23527 126 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 DCTDP32321 178 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 HIST1H2BBP33778 126 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 SMIM11AP58511 58 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 HIST1H2BDP58876 126 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 HIST1H2BCP62807 126 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 HIST2H2BEQ16778 126 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.92□□□□□ -2.26
XRN1-214ENST00000498077 DCUN1D2Q6PH85 259 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 HIST1H2BHQ93079 126 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 LINC00615Q96LM1 132 aaPredicted RBP0.92□□□□□ -2.26
XRN1-214ENST00000498077 HIST1H2BNQ99877 126 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 HIST1H2BMQ99879 126 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 MS4A8Q9BY19 250 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 RAB6CQ9H0N0 254 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 PRELID1Q9Y255 219 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 OTOGQ6ZRI0 2925 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 MYH7BA7E2Y1 1941 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 FRAS1Q86XX4 4008 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 IGHV1OR15-9A0A0B4J2B8 117 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 A0A0J9YY10 115 aa0.92□□□□□ -2.26
XRN1-214ENST00000498077 A0A1B0GX78 115 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms