RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 GTSF1LQ9H1H1 148 aa12.31□□□□□ -0.44
PRKCB-209ENST00000498058 F5H697 171 aa12.3□□□□□ -0.44
PRKCB-209ENST00000498058 MGPP08493 103 aa12.3□□□□□ -0.44
PRKCB-209ENST00000498058 LINC00694P0DN24 101 aa12.3□□□□□ -0.44
PRKCB-209ENST00000498058 RAB4BP61018 213 aa12.3□□□□□ -0.44
PRKCB-209ENST00000498058 SAMD10Q9BYL1 202 aa12.3□□□□□ -0.44
PRKCB-209ENST00000498058 UFSP1Q6NVU6 142 aa12.29□□□□□ -0.44
PRKCB-209ENST00000498058 KIF25-AS1Q9Y6Z4 181 aa12.29□□□□□ -0.44
PRKCB-209ENST00000498058 H7C1H1 209 aa12.28□□□□□ -0.44
PRKCB-209ENST00000498058 ELOBQ15370 118 aa12.28□□□□□ -0.44
PRKCB-209ENST00000498058 CBLN2Q8IUK8 224 aa12.28□□□□□ -0.44
PRKCB-209ENST00000498058 TRBV24-1A0A075B6N3 115 aa12.27□□□□□ -0.45
PRKCB-209ENST00000498058 GAGE12JA6NER3 117 aa12.27□□□□□ -0.45
PRKCB-209ENST00000498058 FAM229AH3BQW9 127 aa12.27□□□□□ -0.45
PRKCB-209ENST00000498058 GAGE1Q13065 139 aa12.27□□□□□ -0.45
PRKCB-209ENST00000498058 GAGE4Q13068 117 aa12.27□□□□□ -0.45
PRKCB-209ENST00000498058 GAGE5Q13069 117 aa12.27□□□□□ -0.45
PRKCB-209ENST00000498058 GAGE13Q4V321 117 aa12.27□□□□□ -0.45
PRKCB-209ENST00000498058 GATD1Q8NB37 220 aa12.27□□□□□ -0.45
PRKCB-209ENST00000498058 DAZ4Q86SG3 579 aaKnown RBP12.26□□□□□ -0.45
PRKCB-209ENST00000498058 DAZ3Q9NR90 486 aaKnown RBP12.26□□□□□ -0.45
PRKCB-209ENST00000498058 LECT2O14960 151 aa12.25□□□□□ -0.45
PRKCB-209ENST00000498058 MT-ND6P03923 174 aa12.25□□□□□ -0.45
PRKCB-209ENST00000498058 LAGE3Q14657 143 aa12.25□□□□□ -0.45
PRKCB-209ENST00000498058 FAM104BQ5XKR9 115 aa12.25□□□□□ -0.45
PRKCB-209ENST00000498058 DNAJC30Q96LL9 226 aa12.25□□□□□ -0.45
PRKCB-209ENST00000498058 TGIF2-C20orf24A0A0A6YYL0 155 aa12.24□□□□□ -0.45
PRKCB-209ENST00000498058 HLA-DQA1P01909 254 aa12.24□□□□□ -0.45
PRKCB-209ENST00000498058 AMN1Q8IY45 258 aa12.24□□□□□ -0.45
PRKCB-209ENST00000498058 MRAP2Q96G30 205 aa12.24□□□□□ -0.45
PRKCB-209ENST00000498058 GNB1LQ9BYB4 327 aa12.24□□□□□ -0.45
PRKCB-209ENST00000498058 TRBV10-1A0A0K0K1A3 114 aa12.23□□□□□ -0.45
PRKCB-209ENST00000498058 RAB4AP20338 218 aa12.23□□□□□ -0.45
PRKCB-209ENST00000498058 SUMO4Q6EEV6 95 aa12.23□□□□□ -0.45
PRKCB-209ENST00000498058 Q6ZSA8 131 aa12.23□□□□□ -0.45
PRKCB-209ENST00000498058 PPP1R17O96001 155 aa12.22□□□□□ -0.45
PRKCB-209ENST00000498058 TMEM136Q6ZRR5 245 aa12.22□□□□□ -0.45
PRKCB-209ENST00000498058 YPEL4Q96NS1 127 aa12.22□□□□□ -0.45
PRKCB-209ENST00000498058 PPBPP02775 128 aa12.21□□□□□ -0.45
PRKCB-209ENST00000498058 LINC01620Q4KN68 170 aa12.21□□□□□ -0.45
PRKCB-209ENST00000498058 RNF185Q96GF1 192 aa12.21□□□□□ -0.45
PRKCB-209ENST00000498058 TM2D2Q9BX73 214 aa12.21□□□□□ -0.45
PRKCB-209ENST00000498058 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.2□□□□□ -0.46
PRKCB-209ENST00000498058 M0QY20 66 aa12.2□□□□□ -0.46
PRKCB-209ENST00000498058 SCO1O75880 301 aa12.2□□□□□ -0.46
PRKCB-209ENST00000498058 APCSP02743 223 aa12.2□□□□□ -0.46
PRKCB-209ENST00000498058 CKS2P33552 79 aa12.2□□□□□ -0.46
PRKCB-209ENST00000498058 RPL36AP83881 106 aaKnown RBP12.2□□□□□ -0.46
PRKCB-209ENST00000498058 MRPL51Q4U2R6 128 aaKnown RBP12.2□□□□□ -0.46
PRKCB-209ENST00000498058 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.2□□□□□ -0.46
PRKCB-209ENST00000498058 BAALCQ8WXS3 180 aa12.2□□□□□ -0.46
PRKCB-209ENST00000498058 RPL36ALQ969Q0 106 aaKnown RBP12.2□□□□□ -0.46
PRKCB-209ENST00000498058 NIT2Q9NQR4 276 aa12.19□□□□□ -0.46
PRKCB-209ENST00000498058 TRAV8-3A0A0A6YYJ7 113 aa12.18□□□□□ -0.46
PRKCB-209ENST00000498058 TRAV26-2A0A0B4J265 109 aa12.18□□□□□ -0.46
PRKCB-209ENST00000498058 ORMDL3Q8N138 153 aa12.18□□□□□ -0.46
PRKCB-209ENST00000498058 TRAPPC1Q9Y5R8 145 aa12.18□□□□□ -0.46
PRKCB-209ENST00000498058 TRBV7-3A0A075B6L6 115 aa12.17□□□□□ -0.46
PRKCB-209ENST00000498058 LINC00528Q8N1L1 170 aa12.17□□□□□ -0.46
PRKCB-209ENST00000498058 MRPL18Q9H0U6 180 aaKnown RBP12.17□□□□□ -0.46
PRKCB-209ENST00000498058 LAMTOR2Q9Y2Q5 125 aa12.17□□□□□ -0.46
PRKCB-209ENST00000498058 D6R8Y8 96 aa12.16□□□□□ -0.46
PRKCB-209ENST00000498058 FABP9Q0Z7S8 132 aa12.16□□□□□ -0.46
PRKCB-209ENST00000498058 NIT1Q86X76 327 aa12.16□□□□□ -0.46
PRKCB-209ENST00000498058 NEXN-AS1Q8NBZ9 246 aa12.16□□□□□ -0.46
PRKCB-209ENST00000498058 COLCA2A8K830 154 aa12.15□□□□□ -0.46
PRKCB-209ENST00000498058 PHOX2AO14813 284 aa12.15□□□□□ -0.46
PRKCB-209ENST00000498058 NCR2O95944 276 aa12.15□□□□□ -0.46
PRKCB-209ENST00000498058 RAB5AP20339 215 aa12.15□□□□□ -0.46
PRKCB-209ENST00000498058 PRELID3AQ96N28 172 aa12.15□□□□□ -0.46
PRKCB-209ENST00000498058 ST20Q9HBF5 79 aa12.15□□□□□ -0.46
PRKCB-209ENST00000498058 RPS10P46783 165 aaKnown RBP12.14□□□□□ -0.47
PRKCB-209ENST00000498058 KLK12Q9UKR0 248 aa12.14□□□□□ -0.47
PRKCB-209ENST00000498058 LRP1Q07954 4544 aaKnown RBP12.13□□□□□ -0.47
PRKCB-209ENST00000498058 TRBV6-5A0A0K0K1A5 114 aa12.13□□□□□ -0.47
PRKCB-209ENST00000498058 SMKR1H3BMG3 65 aa12.13□□□□□ -0.47
PRKCB-209ENST00000498058 KRTAP10-4P60372 401 aaPredicted RBP12.13□□□□□ -0.47
PRKCB-209ENST00000498058 SCXQ7RTU7 201 aa12.13□□□□□ -0.47
PRKCB-209ENST00000498058 RPL39LQ96EH5 51 aaKnown RBP12.13□□□□□ -0.47
PRKCB-209ENST00000498058 C20orf78Q9BR46 151 aa12.13□□□□□ -0.47
PRKCB-209ENST00000498058 J3QL48 77 aa12.12□□□□□ -0.47
PRKCB-209ENST00000498058 TNFRSF6BO95407 300 aa12.12□□□□□ -0.47
PRKCB-209ENST00000498058 UBE2D3P61077 147 aa12.12□□□□□ -0.47
PRKCB-209ENST00000498058 UBE2D2P62837 147 aa12.12□□□□□ -0.47
PRKCB-209ENST00000498058 IGKV2D-24A0A075B6R9 120 aa12.11□□□□□ -0.47
PRKCB-209ENST00000498058 PLA2G1BP04054 148 aaKnown RBP12.11□□□□□ -0.47
PRKCB-209ENST00000498058 TMEM97Q5BJF2 176 aa12.11□□□□□ -0.47
PRKCB-209ENST00000498058 NRACQ8N912 160 aa12.11□□□□□ -0.47
PRKCB-209ENST00000498058 SDHAF1A6NFY7 115 aa12.1□□□□□ -0.47
PRKCB-209ENST00000498058 SUMO2P61956 95 aaKnown RBP12.1□□□□□ -0.47
PRKCB-209ENST00000498058 KIAA1644Q3SXP7 199 aa12.1□□□□□ -0.47
PRKCB-209ENST00000498058 UBE2WQ96B02 151 aa12.1□□□□□ -0.47
PRKCB-209ENST00000498058 KRTAP29-1A8MX34 341 aaPredicted RBP12.09□□□□□ -0.47
PRKCB-209ENST00000498058 GAS8-AS1O95177 125 aa12.09□□□□□ -0.47
PRKCB-209ENST00000498058 NPYP01303 97 aa12.09□□□□□ -0.47
PRKCB-209ENST00000498058 RPL32P62910 135 aaKnown RBP12.09□□□□□ -0.47
PRKCB-209ENST00000498058 MAP1LC3AQ9H492 121 aa12.09□□□□□ -0.47
PRKCB-209ENST00000498058 COX11Q9Y6N1 276 aa12.09□□□□□ -0.47
PRKCB-209ENST00000498058 FAT3Q8TDW7 4589 aa12.09□□□□□ -0.47
PRKCB-209ENST00000498058 I3L3M4 83 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms