RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 IGKV2-24A0A0C4DH68 120 aa13.6□□□□□ -0.23
CLIC4-204ENST00000497755 A0A0J9YXV3 536 aa13.6□□□□□ -0.23
CLIC4-204ENST00000497755 UBE2L6O14933 153 aa13.6□□□□□ -0.23
CLIC4-204ENST00000497755 CACNG7P62955 275 aa13.6□□□□□ -0.23
CLIC4-204ENST00000497755 HIGD2BQ4VC39 106 aa13.6□□□□□ -0.23
CLIC4-204ENST00000497755 KCNRGQ8N5I3 272 aa13.6□□□□□ -0.23
CLIC4-204ENST00000497755 STPG4Q8N801 248 aa13.6□□□□□ -0.23
CLIC4-204ENST00000497755 OR2D3Q8NGH3 330 aa13.59□□□□□ -0.23
CLIC4-204ENST00000497755 LYPD6BQ8NI32 183 aa13.59□□□□□ -0.23
CLIC4-204ENST00000497755 UMAD1C9J7I0 102 aa13.58□□□□□ -0.24
CLIC4-204ENST00000497755 AMTP48728 403 aa13.58□□□□□ -0.24
CLIC4-204ENST00000497755 RPS20P60866 119 aaKnown RBP13.58□□□□□ -0.24
CLIC4-204ENST00000497755 IGKV3OR2-268A0A0C4DH90 116 aa13.57□□□□□ -0.24
CLIC4-204ENST00000497755 C19orf71A6NCJ1 209 aa13.57□□□□□ -0.24
CLIC4-204ENST00000497755 COTL1Q14019 142 aa13.57□□□□□ -0.24
CLIC4-204ENST00000497755 A0A096LNI7 61 aa13.55□□□□□ -0.24
CLIC4-204ENST00000497755 F2Z2F3 143 aa13.55□□□□□ -0.24
CLIC4-204ENST00000497755 H2AFB1P0C5Y9 115 aa13.55□□□□□ -0.24
CLIC4-204ENST00000497755 SPINK6Q6UWN8 80 aa13.55□□□□□ -0.24
CLIC4-204ENST00000497755 CHCHD10Q8WYQ3 142 aaPredicted RBP13.55□□□□□ -0.24
CLIC4-204ENST00000497755 C11orf52Q96A22 123 aa13.55□□□□□ -0.24
CLIC4-204ENST00000497755 GVQW2A0A096LPI5 108 aaPredicted RBP13.54□□□□□ -0.24
CLIC4-204ENST00000497755 TRGC1P0CF51 173 aa13.54□□□□□ -0.24
CLIC4-204ENST00000497755 NTF3P20783 257 aa13.54□□□□□ -0.24
CLIC4-204ENST00000497755 CENPWQ5EE01 88 aa13.54□□□□□ -0.24
CLIC4-204ENST00000497755 LYZL1Q6UWQ5 148 aa13.54□□□□□ -0.24
CLIC4-204ENST00000497755 SMLR1H3BR10 107 aa13.53□□□□□ -0.24
CLIC4-204ENST00000497755 CCL20P78556 96 aa13.53□□□□□ -0.24
CLIC4-204ENST00000497755 SRSF9Q13242 221 aaKnown RBP eCLIP13.53□□□□□ -0.24
CLIC4-204ENST00000497755 RAB19A4D1S5 217 aa13.51□□□□□ -0.25
CLIC4-204ENST00000497755 REG3GQ6UW15 175 aa13.51□□□□□ -0.25
CLIC4-204ENST00000497755 XKRY2A2RUG3 117 aa13.5□□□□□ -0.25
CLIC4-204ENST00000497755 IFNA1P01562 189 aa13.5□□□□□ -0.25
CLIC4-204ENST00000497755 FOXI1Q12951 378 aa13.5□□□□□ -0.25
CLIC4-204ENST00000497755 ZNF345Q14585 488 aa13.5□□□□□ -0.25
CLIC4-204ENST00000497755 C9orf62Q8N4C0 152 aa13.5□□□□□ -0.25
CLIC4-204ENST00000497755 GATD1Q8NB37 220 aa13.5□□□□□ -0.25
CLIC4-204ENST00000497755 GNG13Q9P2W3 67 aa13.5□□□□□ -0.25
CLIC4-204ENST00000497755 LPAP08519 4548 aa13.49□□□□□ -0.25
CLIC4-204ENST00000497755 AMMECR1LQ6DCA0 310 aa13.49□□□□□ -0.25
CLIC4-204ENST00000497755 Q6ZNX1 250 aa13.49□□□□□ -0.25
CLIC4-204ENST00000497755 LINC00474Q9P2X8 69 aa13.49□□□□□ -0.25
CLIC4-204ENST00000497755 MANBALQ9NQG1 85 aa13.48□□□□□ -0.25
CLIC4-204ENST00000497755 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.47□□□□□ -0.25
CLIC4-204ENST00000497755 TRAV26-2A0A0B4J265 109 aa13.47□□□□□ -0.25
CLIC4-204ENST00000497755 IGKV2-29A2NJV5 120 aaPredicted RBP13.47□□□□□ -0.25
CLIC4-204ENST00000497755 GNG4P50150 75 aa13.47□□□□□ -0.25
CLIC4-204ENST00000497755 RNASEKQ6P5S7 137 aaKnown RBP13.47□□□□□ -0.25
CLIC4-204ENST00000497755 SMIM12Q96EX1 92 aa13.47□□□□□ -0.25
CLIC4-204ENST00000497755 H7C423 109 aa13.46□□□□□ -0.25
CLIC4-204ENST00000497755 GAS8-AS1O95177 125 aa13.46□□□□□ -0.25
CLIC4-204ENST00000497755 CTRLP40313 264 aa13.46□□□□□ -0.25
CLIC4-204ENST00000497755 TWIST1Q15672 202 aa13.46□□□□□ -0.25
CLIC4-204ENST00000497755 LINC00526Q96FQ7 95 aa13.46□□□□□ -0.25
CLIC4-204ENST00000497755 TRBV20OR9-2A0A075B6H5 130 aa13.45□□□□□ -0.26
CLIC4-204ENST00000497755 NCR2O95944 276 aa13.45□□□□□ -0.26
CLIC4-204ENST00000497755 FGF6P10767 208 aa13.45□□□□□ -0.26
CLIC4-204ENST00000497755 Q6ZRP5 223 aa13.45□□□□□ -0.26
CLIC4-204ENST00000497755 RPL39LQ96EH5 51 aaKnown RBP13.45□□□□□ -0.26
CLIC4-204ENST00000497755 CNFNQ9BYD5 112 aa13.45□□□□□ -0.26
CLIC4-204ENST00000497755 TRAV1-1A0A0B4J248 108 aa13.44□□□□□ -0.26
CLIC4-204ENST00000497755 NUDT10Q8NFP7 164 aa13.44□□□□□ -0.26
CLIC4-204ENST00000497755 OR5A1Q8NGJ0 315 aa13.44□□□□□ -0.26
CLIC4-204ENST00000497755 NUDT11Q96G61 164 aa13.44□□□□□ -0.26
CLIC4-204ENST00000497755 HMSDA8MTL9 139 aa13.43□□□□□ -0.26
CLIC4-204ENST00000497755 BCL2L11O43521 198 aa13.43□□□□□ -0.26
CLIC4-204ENST00000497755 XCL1P47992 114 aa13.43□□□□□ -0.26
CLIC4-204ENST00000497755 KANTRA0A1W2PQU2 76 aa13.42□□□□□ -0.26
CLIC4-204ENST00000497755 CARD19Q96LW7 228 aa13.42□□□□□ -0.26
CLIC4-204ENST00000497755 PKIGQ9Y2B9 76 aa13.42□□□□□ -0.26
CLIC4-204ENST00000497755 IGHV1-58A0A0C4DH39 117 aa13.41□□□□□ -0.26
CLIC4-204ENST00000497755 LINC00959A0A1B0GUT2 108 aa13.41□□□□□ -0.26
CLIC4-204ENST00000497755 APCSP02743 223 aa13.41□□□□□ -0.26
CLIC4-204ENST00000497755 FOXA3P55318 350 aaPredicted RBP13.41□□□□□ -0.26
CLIC4-204ENST00000497755 BIN3Q9NQY0 253 aa13.41□□□□□ -0.26
CLIC4-204ENST00000497755 FAM231BA6NCW3 169 aa13.4□□□□□ -0.26
CLIC4-204ENST00000497755 CCL25O15444 150 aa13.4□□□□□ -0.26
CLIC4-204ENST00000497755 MED9Q9NWA0 146 aa13.4□□□□□ -0.26
CLIC4-204ENST00000497755 SDHAF1A6NFY7 115 aa13.39□□□□□ -0.27
CLIC4-204ENST00000497755 ZNF25P17030 456 aaPredicted RBP13.39□□□□□ -0.27
CLIC4-204ENST00000497755 EIF5AP63241 154 aaKnown RBP13.39□□□□□ -0.27
CLIC4-204ENST00000497755 MEF2BQ02080 365 aaPredicted RBP13.39□□□□□ -0.27
CLIC4-204ENST00000497755 BATF3Q9NR55 127 aa13.39□□□□□ -0.27
CLIC4-204ENST00000497755 PDE6DO43924 150 aa13.38□□□□□ -0.27
CLIC4-204ENST00000497755 SYCNQ0VAF6 134 aa13.38□□□□□ -0.27
CLIC4-204ENST00000497755 PTTG1IPP53801 180 aa13.37□□□□□ -0.27
CLIC4-204ENST00000497755 BTF3L4Q96K17 158 aa13.37□□□□□ -0.27
CLIC4-204ENST00000497755 ESDP10768 282 aa13.36□□□□□ -0.27
CLIC4-204ENST00000497755 TMEM101Q96IK0 257 aa13.36□□□□□ -0.27
CLIC4-204ENST00000497755 RNASE7Q9H1E1 156 aaKnown RBP13.36□□□□□ -0.27
CLIC4-204ENST00000497755 RPP21Q9H633 154 aaKnown RBP13.36□□□□□ -0.27
CLIC4-204ENST00000497755 A0A1W2PNN7 141 aa13.35□□□□□ -0.27
CLIC4-204ENST00000497755 I3L3M4 83 aa13.35□□□□□ -0.27
CLIC4-204ENST00000497755 ZNF561-AS1K7EIQ3 104 aa13.35□□□□□ -0.27
CLIC4-204ENST00000497755 PMCHP20382 165 aa13.35□□□□□ -0.27
CLIC4-204ENST00000497755 RGS21Q2M5E4 152 aa13.35□□□□□ -0.27
CLIC4-204ENST00000497755 TEX261Q6UWH6 196 aa13.35□□□□□ -0.27
CLIC4-204ENST00000497755 GAGE2BQ13066 116 aa13.34□□□□□ -0.27
CLIC4-204ENST00000497755 SS18Q15532 418 aa13.34□□□□□ -0.27
CLIC4-204ENST00000497755 CD164L2Q6UWJ8 174 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms