RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 TMEM191AQ9H0A3 160 aa7.13□□□□□ -1.27
SHROOM3-210ENST00000497440 PKHD1L1Q86WI1 4243 aa7.12□□□□□ -1.27
SHROOM3-210ENST00000497440 FAT3Q8TDW7 4589 aa7.12□□□□□ -1.27
SHROOM3-210ENST00000497440 IGKV2D-24A0A075B6R9 120 aa7.12□□□□□ -1.27
SHROOM3-210ENST00000497440 HIGD1CA8MV81 97 aa7.12□□□□□ -1.27
SHROOM3-210ENST00000497440 MGPP08493 103 aa7.12□□□□□ -1.27
SHROOM3-210ENST00000497440 RPL23P62829 140 aaKnown RBP7.12□□□□□ -1.27
SHROOM3-210ENST00000497440 KCNIP4Q6PIL6 250 aa7.12□□□□□ -1.27
SHROOM3-210ENST00000497440 LRP1Q07954 4544 aaKnown RBP7.12□□□□□ -1.27
SHROOM3-210ENST00000497440 A0A1B0GUT8 65 aa7.11□□□□□ -1.27
SHROOM3-210ENST00000497440 NCR2O95944 276 aa7.11□□□□□ -1.27
SHROOM3-210ENST00000497440 POLR2KP53803 58 aaKnown RBP7.11□□□□□ -1.27
SHROOM3-210ENST00000497440 TMEM241Q24JQ0 296 aa7.11□□□□□ -1.27
SHROOM3-210ENST00000497440 C15orf54Q8N8G6 183 aa7.11□□□□□ -1.27
SHROOM3-210ENST00000497440 RNF185Q96GF1 192 aa7.11□□□□□ -1.27
SHROOM3-210ENST00000497440 FLG2Q5D862 2391 aaPredicted RBP7.1□□□□□ -1.27
SHROOM3-210ENST00000497440 IGLV4-60A0A075B6I1 120 aa7.1□□□□□ -1.27
SHROOM3-210ENST00000497440 TRAV8-4A0A0B4J246 113 aa7.1□□□□□ -1.27
SHROOM3-210ENST00000497440 TRAV26-2A0A0B4J265 109 aa7.1□□□□□ -1.27
SHROOM3-210ENST00000497440 GAS8-AS1O95177 125 aa7.1□□□□□ -1.27
SHROOM3-210ENST00000497440 ANGP03950 147 aaKnown RBP7.1□□□□□ -1.27
SHROOM3-210ENST00000497440 ESDP10768 282 aa7.1□□□□□ -1.27
SHROOM3-210ENST00000497440 RAB4AP20338 218 aa7.1□□□□□ -1.27
SHROOM3-210ENST00000497440 GAGE6Q13070 117 aa7.1□□□□□ -1.27
SHROOM3-210ENST00000497440 LINC00269Q8N2A0 174 aa7.1□□□□□ -1.27
SHROOM3-210ENST00000497440 NUP35Q8NFH5 326 aa7.1□□□□□ -1.27
SHROOM3-210ENST00000497440 RPL39LQ96EH5 51 aaKnown RBP7.1□□□□□ -1.27
SHROOM3-210ENST00000497440 TMEM243Q9BU79 118 aa7.1□□□□□ -1.27
SHROOM3-210ENST00000497440 C1orf43Q9BWL3 253 aa7.1□□□□□ -1.27
SHROOM3-210ENST00000497440 SMIM27A0A1W2PRY6 76 aa7.09□□□□□ -1.27
SHROOM3-210ENST00000497440 SDHAF1A6NFY7 115 aa7.09□□□□□ -1.27
SHROOM3-210ENST00000497440 H7C423 109 aa7.09□□□□□ -1.27
SHROOM3-210ENST00000497440 LECT2O14960 151 aa7.09□□□□□ -1.27
SHROOM3-210ENST00000497440 NAT8Q9UHE5 227 aa7.09□□□□□ -1.27
SHROOM3-210ENST00000497440 TRBV27A0A0K0K1C4 114 aa7.08□□□□□ -1.28
SHROOM3-210ENST00000497440 EPM2AB3EWF7 344 aa7.08□□□□□ -1.28
SHROOM3-210ENST00000497440 CEBPGP53567 150 aa7.08□□□□□ -1.28
SHROOM3-210ENST00000497440 REG3AQ06141 175 aa7.08□□□□□ -1.28
SHROOM3-210ENST00000497440 COTL1Q14019 142 aa7.08□□□□□ -1.28
SHROOM3-210ENST00000497440 PEA15Q15121 130 aa7.08□□□□□ -1.28
SHROOM3-210ENST00000497440 DGAT2L7PQ6IED9 249 aa7.08□□□□□ -1.28
SHROOM3-210ENST00000497440 SMIM15Q7Z3B0 74 aa7.08□□□□□ -1.28
SHROOM3-210ENST00000497440 DMBT1Q9UGM3 2413 aaPredicted RBP7.08□□□□□ -1.28
SHROOM3-210ENST00000497440 CRPP02741 224 aa7.07□□□□□ -1.28
SHROOM3-210ENST00000497440 PRSS1P07477 247 aa7.07□□□□□ -1.28
SHROOM3-210ENST00000497440 C14orf177Q52M58 125 aa7.07□□□□□ -1.28
SHROOM3-210ENST00000497440 C9orf163Q8N9P6 203 aa7.07□□□□□ -1.28
SHROOM3-210ENST00000497440 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.06□□□□□ -1.28
SHROOM3-210ENST00000497440 TRBV24-1A0A075B6N3 115 aa7.06□□□□□ -1.28
SHROOM3-210ENST00000497440 LOC100996750A0A140TA64 210 aa7.06□□□□□ -1.28
SHROOM3-210ENST00000497440 USP17L23D6RBM5 183 aa7.06□□□□□ -1.28
SHROOM3-210ENST00000497440 I3L3M4 83 aa7.06□□□□□ -1.28
SHROOM3-210ENST00000497440 RPS10P46783 165 aaKnown RBP7.06□□□□□ -1.28
SHROOM3-210ENST00000497440 NRACQ8N912 160 aa7.06□□□□□ -1.28
SHROOM3-210ENST00000497440 CLRN3Q8NCR9 226 aa7.06□□□□□ -1.28
SHROOM3-210ENST00000497440 MRAP2Q96G30 205 aa7.06□□□□□ -1.28
SHROOM3-210ENST00000497440 KRTAP4-6Q9BYQ5 205 aa7.06□□□□□ -1.28
SHROOM3-210ENST00000497440 NAT8BQ9UHF3 227 aa7.06□□□□□ -1.28
SHROOM3-210ENST00000497440 TSHBP01222 138 aa7.05□□□□□ -1.28
SHROOM3-210ENST00000497440 AMTP48728 403 aa7.05□□□□□ -1.28
SHROOM3-210ENST00000497440 CNBPP62633 177 aaKnown RBP7.05□□□□□ -1.28
SHROOM3-210ENST00000497440 RIGQ13278 110 aa7.05□□□□□ -1.28
SHROOM3-210ENST00000497440 Q5VSD8 79 aa7.05□□□□□ -1.28
SHROOM3-210ENST00000497440 FAM104BQ5XKR9 115 aa7.05□□□□□ -1.28
SHROOM3-210ENST00000497440 MRPL52Q86TS9 123 aaKnown RBP7.05□□□□□ -1.28
SHROOM3-210ENST00000497440 AMN1Q8IY45 258 aa7.05□□□□□ -1.28
SHROOM3-210ENST00000497440 A0A1B0GXF2 115 aa7.04□□□□□ -1.28
SHROOM3-210ENST00000497440 LINC00862A6NCI5 91 aa7.04□□□□□ -1.28
SHROOM3-210ENST00000497440 SMR3BP02814 79 aaPredicted RBP7.04□□□□□ -1.28
SHROOM3-210ENST00000497440 SLPIP03973 132 aa7.04□□□□□ -1.28
SHROOM3-210ENST00000497440 ZNF25P17030 456 aaPredicted RBP7.04□□□□□ -1.28
SHROOM3-210ENST00000497440 KRTAP10-4P60372 401 aaPredicted RBP7.04□□□□□ -1.28
SHROOM3-210ENST00000497440 RPL32P62910 135 aaKnown RBP7.04□□□□□ -1.28
SHROOM3-210ENST00000497440 LINC01620Q4KN68 170 aa7.04□□□□□ -1.28
SHROOM3-210ENST00000497440 DEFB104AQ8WTQ1 72 aa7.04□□□□□ -1.28
SHROOM3-210ENST00000497440 BORCS7Q96B45 105 aa7.04□□□□□ -1.28
SHROOM3-210ENST00000497440 CHAC1Q9BUX1 264 aa7.04□□□□□ -1.28
SHROOM3-210ENST00000497440 A0A1B0GW15 77 aa7.03□□□□□ -1.28
SHROOM3-210ENST00000497440 FGF6P10767 208 aa7.03□□□□□ -1.28
SHROOM3-210ENST00000497440 ADIRFQ15847 76 aa7.03□□□□□ -1.28
SHROOM3-210ENST00000497440 SDIM1Q6ZPB5 146 aa7.03□□□□□ -1.28
SHROOM3-210ENST00000497440 ST20Q9HBF5 79 aa7.03□□□□□ -1.28
SHROOM3-210ENST00000497440 CSDC2Q9Y534 153 aaKnown RBP7.03□□□□□ -1.28
SHROOM3-210ENST00000497440 VCYO14598 125 aa7.02□□□□□ -1.29
SHROOM3-210ENST00000497440 PPP1R17O96001 155 aa7.02□□□□□ -1.29
SHROOM3-210ENST00000497440 APCSP02743 223 aa7.02□□□□□ -1.29
SHROOM3-210ENST00000497440 PMCHP20382 165 aa7.02□□□□□ -1.29
SHROOM3-210ENST00000497440 HAMPP81172 84 aa7.02□□□□□ -1.29
SHROOM3-210ENST00000497440 CIRBPQ14011 172 aaKnown RBP7.02□□□□□ -1.29
SHROOM3-210ENST00000497440 MRPL51Q4U2R6 128 aaKnown RBP7.02□□□□□ -1.29
SHROOM3-210ENST00000497440 CLPSL2Q6UWE3 100 aa7.02□□□□□ -1.29
SHROOM3-210ENST00000497440 SCXQ7RTU7 201 aa7.02□□□□□ -1.29
SHROOM3-210ENST00000497440 CIRBP-AS1Q8TBR5 109 aa7.02□□□□□ -1.29
SHROOM3-210ENST00000497440 C20orf78Q9BR46 151 aa7.02□□□□□ -1.29
SHROOM3-210ENST00000497440 CDC42SE2Q9NRR3 84 aa7.02□□□□□ -1.29
SHROOM3-210ENST00000497440 IGLV10-54A0A075B6I4 117 aa7.01□□□□□ -1.29
SHROOM3-210ENST00000497440 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.01□□□□□ -1.29
SHROOM3-210ENST00000497440 IGKV2-29A2NJV5 120 aaPredicted RBP7.01□□□□□ -1.29
SHROOM3-210ENST00000497440 FAM229AH3BQW9 127 aa7.01□□□□□ -1.29
SHROOM3-210ENST00000497440 UBE2L6O14933 153 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms