RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 STAG3L3P0CL85 134 aa3.82□□□□□ -1.8
MSH5-219ENST00000497269 ATP6V0CP27449 155 aa3.82□□□□□ -1.8
MSH5-219ENST00000497269 ASIPP42127 132 aa3.82□□□□□ -1.8
MSH5-219ENST00000497269 CRIP1P50238 77 aa3.82□□□□□ -1.8
MSH5-219ENST00000497269 HNRNPA3P51991 378 aaKnown RBP3.82□□□□□ -1.8
MSH5-219ENST00000497269 CLPSL2Q6UWE3 100 aa3.82□□□□□ -1.8
MSH5-219ENST00000497269 CYB561D1Q8N8Q1 229 aa3.82□□□□□ -1.8
MSH5-219ENST00000497269 C5orf17Q8NAS9 161 aa3.82□□□□□ -1.8
MSH5-219ENST00000497269 OR2G3Q8NGZ4 309 aa3.82□□□□□ -1.8
MSH5-219ENST00000497269 ARL2-SNX15V9GYD0 113 aa3.82□□□□□ -1.8
MSH5-219ENST00000497269 LRP1Q07954 4544 aaKnown RBP3.81□□□□□ -1.8
MSH5-219ENST00000497269 A0A087WX48 190 aa3.81□□□□□ -1.8
MSH5-219ENST00000497269 A0A1B0GV50 99 aa3.81□□□□□ -1.8
MSH5-219ENST00000497269 FAM168BA1KXE4 195 aa3.81□□□□□ -1.8
MSH5-219ENST00000497269 RNF222A6NCQ9 220 aa3.81□□□□□ -1.8
MSH5-219ENST00000497269 FABP5P3A8MUU1 101 aa3.81□□□□□ -1.8
MSH5-219ENST00000497269 SH2D1AO60880 128 aa3.81□□□□□ -1.8
MSH5-219ENST00000497269 HLA-DQA1P01909 254 aa3.81□□□□□ -1.8
MSH5-219ENST00000497269 RAB5CP51148 216 aa3.81□□□□□ -1.8
MSH5-219ENST00000497269 KRTAP10-4P60372 401 aaPredicted RBP3.81□□□□□ -1.8
MSH5-219ENST00000497269 CXCL6P80162 114 aa3.81□□□□□ -1.8
MSH5-219ENST00000497269 ZNF726P1Q15940 193 aa3.81□□□□□ -1.8
MSH5-219ENST00000497269 Q6ZSA8 131 aa3.81□□□□□ -1.8
MSH5-219ENST00000497269 NIT1Q86X76 327 aa3.81□□□□□ -1.8
MSH5-219ENST00000497269 C15orf54Q8N8G6 183 aa3.81□□□□□ -1.8
MSH5-219ENST00000497269 ZC2HC1AQ96GY0 325 aa3.81□□□□□ -1.8
MSH5-219ENST00000497269 MARVELD1Q9BSK0 173 aa3.81□□□□□ -1.8
MSH5-219ENST00000497269 CHAC1Q9BUX1 264 aa3.81□□□□□ -1.8
MSH5-219ENST00000497269 ACTR3CQ9C0K3 210 aaPredicted RBP3.81□□□□□ -1.8
MSH5-219ENST00000497269 ALG5Q9Y673 324 aa3.81□□□□□ -1.8
MSH5-219ENST00000497269 UBR4Q5T4S7 5183 aa3.81□□□□□ -1.8
MSH5-219ENST00000497269 A8MWV9 139 aa3.8□□□□□ -1.8
MSH5-219ENST00000497269 KRBOX1C9JBD0 128 aa3.8□□□□□ -1.8
MSH5-219ENST00000497269 PANO1I0J062 215 aa3.8□□□□□ -1.8
MSH5-219ENST00000497269 CXorf1O96002 111 aa3.8□□□□□ -1.8
MSH5-219ENST00000497269 PET100P0DJ07 73 aa3.8□□□□□ -1.8
MSH5-219ENST00000497269 LINC00694P0DN24 101 aa3.8□□□□□ -1.8
MSH5-219ENST00000497269 RPL19P84098 196 aaKnown RBP3.8□□□□□ -1.8
MSH5-219ENST00000497269 LAGE3Q14657 143 aa3.8□□□□□ -1.8
MSH5-219ENST00000497269 SAPCD1Q5SSQ6 148 aa3.8□□□□□ -1.8
MSH5-219ENST00000497269 RPL7L1Q6DKI1 246 aaKnown RBP3.8□□□□□ -1.8
MSH5-219ENST00000497269 UFSP1Q6NVU6 142 aa3.8□□□□□ -1.8
MSH5-219ENST00000497269 ENHOQ6UWT2 76 aa3.8□□□□□ -1.8
MSH5-219ENST00000497269 Q8N976 141 aa3.8□□□□□ -1.8
MSH5-219ENST00000497269 DPH3Q96FX2 82 aa3.8□□□□□ -1.8
MSH5-219ENST00000497269 PHLDA3Q9Y5J5 127 aa3.8□□□□□ -1.8
MSH5-219ENST00000497269 IGLV10-54A0A075B6I4 117 aa3.79□□□□□ -1.8
MSH5-219ENST00000497269 KRTAP9-6A8MVA2 160 aa3.79□□□□□ -1.8
MSH5-219ENST00000497269 PEX7O00628 323 aa3.79□□□□□ -1.8
MSH5-219ENST00000497269 C1QBP02746 253 aa3.79□□□□□ -1.8
MSH5-219ENST00000497269 ANGP03950 147 aaKnown RBP3.79□□□□□ -1.8
MSH5-219ENST00000497269 TPT1P13693 172 aaKnown RBP3.79□□□□□ -1.8
MSH5-219ENST00000497269 RPL37AP61513 92 aaKnown RBP3.79□□□□□ -1.8
MSH5-219ENST00000497269 MPV17L2Q567V2 206 aa3.79□□□□□ -1.8
MSH5-219ENST00000497269 ZFP2Q6ZN57 461 aa3.79□□□□□ -1.8
MSH5-219ENST00000497269 Q86TA4 180 aa3.79□□□□□ -1.8
MSH5-219ENST00000497269 RMI2Q96E14 147 aa3.79□□□□□ -1.8
MSH5-219ENST00000497269 SFRP2Q96HF1 295 aa3.79□□□□□ -1.8
MSH5-219ENST00000497269 TMEM167BQ9NRX6 74 aa3.79□□□□□ -1.8
MSH5-219ENST00000497269 A0A087WWC5 75 aa3.78□□□□□ -1.8
MSH5-219ENST00000497269 FXYD6-FXYD2A0A087WZ82 144 aa3.78□□□□□ -1.8
MSH5-219ENST00000497269 SERTM2A0A1B0GWG4 89 aa3.78□□□□□ -1.8
MSH5-219ENST00000497269 FAM74A7A6NL05 159 aa3.78□□□□□ -1.8
MSH5-219ENST00000497269 UBE2G1P62253 170 aa3.78□□□□□ -1.8
MSH5-219ENST00000497269 IFITM2Q01629 132 aa3.78□□□□□ -1.8
MSH5-219ENST00000497269 ZNF56Q15929 161 aa3.78□□□□□ -1.8
MSH5-219ENST00000497269 KCNIP4Q6PIL6 250 aa3.78□□□□□ -1.8
MSH5-219ENST00000497269 ATRAIDQ6UW56 229 aa3.78□□□□□ -1.8
MSH5-219ENST00000497269 ARL6IP6Q8N6S5 226 aa3.78□□□□□ -1.8
MSH5-219ENST00000497269 SUN5Q8TC36 379 aa3.78□□□□□ -1.8
MSH5-219ENST00000497269 PTH2Q96A98 100 aa3.78□□□□□ -1.8
MSH5-219ENST00000497269 MED28Q9H204 178 aa3.78□□□□□ -1.8
MSH5-219ENST00000497269 IL36BQ9NZH7 164 aa3.78□□□□□ -1.8
MSH5-219ENST00000497269 A0A1W2PRE2 83 aa3.77□□□□□ -1.81
MSH5-219ENST00000497269 SMLR1H3BR10 107 aa3.77□□□□□ -1.81
MSH5-219ENST00000497269 CRPP02741 224 aa3.77□□□□□ -1.81
MSH5-219ENST00000497269 UBE2D3P61077 147 aa3.77□□□□□ -1.81
MSH5-219ENST00000497269 UBE2D2P62837 147 aa3.77□□□□□ -1.81
MSH5-219ENST00000497269 FAM162BQ5T6X4 162 aa3.77□□□□□ -1.81
MSH5-219ENST00000497269 NTM-AS1Q6ZSK4 140 aa3.77□□□□□ -1.81
MSH5-219ENST00000497269 LINC00269Q8N2A0 174 aa3.77□□□□□ -1.81
MSH5-219ENST00000497269 OR10AG1Q8NH19 301 aa3.77□□□□□ -1.81
MSH5-219ENST00000497269 PSMG3Q9BT73 122 aaPredicted RBP3.77□□□□□ -1.81
MSH5-219ENST00000497269 TNFSF18Q9UNG2 199 aa3.77□□□□□ -1.81
MSH5-219ENST00000497269 FAT3Q8TDW7 4589 aa3.76□□□□□ -1.81
MSH5-219ENST00000497269 HMCN2Q8NDA2 5059 aa3.76□□□□□ -1.81
MSH5-219ENST00000497269 TRBV7-3A0A075B6L6 115 aa3.76□□□□□ -1.81
MSH5-219ENST00000497269 TRBV6-8A0A0A6YYG3 113 aa3.76□□□□□ -1.81
MSH5-219ENST00000497269 IGKV3OR2-268A0A0C4DH90 116 aa3.76□□□□□ -1.81
MSH5-219ENST00000497269 CTXND1A0A1B0GTU2 59 aa3.76□□□□□ -1.81
MSH5-219ENST00000497269 MAP1LC3B2A6NCE7 125 aa3.76□□□□□ -1.81
MSH5-219ENST00000497269 OXTP01178 125 aa3.76□□□□□ -1.81
MSH5-219ENST00000497269 MBP02144 154 aa3.76□□□□□ -1.81
MSH5-219ENST00000497269 MGPP08493 103 aa3.76□□□□□ -1.81
MSH5-219ENST00000497269 CHTF8P0CG12 524 aa3.76□□□□□ -1.81
MSH5-219ENST00000497269 GZMBP10144 247 aa3.76□□□□□ -1.81
MSH5-219ENST00000497269 SERF2P84101 59 aa3.76□□□□□ -1.81
MSH5-219ENST00000497269 ELOBQ15370 118 aa3.76□□□□□ -1.81
MSH5-219ENST00000497269 AKR1C8PQ5T2L2 129 aa3.76□□□□□ -1.81
MSH5-219ENST00000497269 ZFP82Q8N141 532 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 142.6 ms