RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 UBE2E2Q96LR5 201 aa4.95□□□□□ -1.62
HOXA9-206ENST00000497089 PRADC1Q9BSG0 188 aa4.95□□□□□ -1.62
HOXA9-206ENST00000497089 TRAV12-1A0A0B4J245 112 aa4.94□□□□□ -1.62
HOXA9-206ENST00000497089 TRAV41A0A0B4J266 112 aa4.94□□□□□ -1.62
HOXA9-206ENST00000497089 LINC01549A6NIU2 74 aa4.94□□□□□ -1.62
HOXA9-206ENST00000497089 INS-IGF2F8WCM5 200 aa4.94□□□□□ -1.62
HOXA9-206ENST00000497089 H3BVH4 76 aa4.94□□□□□ -1.62
HOXA9-206ENST00000497089 PYYP10082 97 aa4.94□□□□□ -1.62
HOXA9-206ENST00000497089 HLA-DMBP28068 263 aa4.94□□□□□ -1.62
HOXA9-206ENST00000497089 CKS2P33552 79 aa4.94□□□□□ -1.62
HOXA9-206ENST00000497089 LEPP41159 167 aa4.94□□□□□ -1.62
HOXA9-206ENST00000497089 NDPQ00604 133 aa4.94□□□□□ -1.62
HOXA9-206ENST00000497089 C6orf226Q5I0X4 101 aa4.94□□□□□ -1.62
HOXA9-206ENST00000497089 ZNF491Q8N8L2 437 aa4.94□□□□□ -1.62
HOXA9-206ENST00000497089 TMEM75Q8N9X5 138 aa4.94□□□□□ -1.62
HOXA9-206ENST00000497089 THAP8Q8NA92 274 aa4.94□□□□□ -1.62
HOXA9-206ENST00000497089 C21orf62Q9NYP8 219 aa4.94□□□□□ -1.62
HOXA9-206ENST00000497089 USP17L23D6RBM5 183 aa4.93□□□□□ -1.62
HOXA9-206ENST00000497089 G3V318 75 aa4.93□□□□□ -1.62
HOXA9-206ENST00000497089 TCL1BO95988 128 aa4.93□□□□□ -1.62
HOXA9-206ENST00000497089 ACYP1P07311 99 aa4.93□□□□□ -1.62
HOXA9-206ENST00000497089 P0DMU3 169 aa4.93□□□□□ -1.62
HOXA9-206ENST00000497089 FAM231AP0DMU4 169 aa4.93□□□□□ -1.62
HOXA9-206ENST00000497089 FAM231CP0DMU5 169 aa4.93□□□□□ -1.62
HOXA9-206ENST00000497089 LINC00694P0DN24 101 aa4.93□□□□□ -1.62
HOXA9-206ENST00000497089 HOXD3P31249 432 aaPredicted RBP4.93□□□□□ -1.62
HOXA9-206ENST00000497089 ERHP84090 104 aaKnown RBP4.93□□□□□ -1.62
HOXA9-206ENST00000497089 PMVKQ15126 192 aa4.93□□□□□ -1.62
HOXA9-206ENST00000497089 PLGLAQ15195 96 aa4.93□□□□□ -1.62
HOXA9-206ENST00000497089 ATXN8Q156A1 80 aa4.93□□□□□ -1.62
HOXA9-206ENST00000497089 DEFB136Q30KP8 78 aa4.93□□□□□ -1.62
HOXA9-206ENST00000497089 MRPL51Q4U2R6 128 aaKnown RBP4.93□□□□□ -1.62
HOXA9-206ENST00000497089 TMEM170BQ5T4T1 132 aa4.93□□□□□ -1.62
HOXA9-206ENST00000497089 ASPHD1Q5U4P2 390 aa4.93□□□□□ -1.62
HOXA9-206ENST00000497089 LINC00322Q6ZN03 302 aaPredicted RBP4.93□□□□□ -1.62
HOXA9-206ENST00000497089 FAM19A5Q7Z5A7 132 aaPredicted RBP4.93□□□□□ -1.62
HOXA9-206ENST00000497089 LINC00526Q96FQ7 95 aa4.93□□□□□ -1.62
HOXA9-206ENST00000497089 Q9H3A6 140 aa4.93□□□□□ -1.62
HOXA9-206ENST00000497089 MSRB1Q9NZV6 116 aa4.93□□□□□ -1.62
HOXA9-206ENST00000497089 TMEM14CQ9P0S9 112 aa4.93□□□□□ -1.62
HOXA9-206ENST00000497089 F5H768 121 aa4.92□□□□□ -1.62
HOXA9-206ENST00000497089 H3BMM0 161 aa4.92□□□□□ -1.62
HOXA9-206ENST00000497089 H7C1H1 209 aa4.92□□□□□ -1.62
HOXA9-206ENST00000497089 UPK2O00526 184 aa4.92□□□□□ -1.62
HOXA9-206ENST00000497089 IGLV2-23P01705 113 aa4.92□□□□□ -1.62
HOXA9-206ENST00000497089 IGKV1-16P04430 117 aa4.92□□□□□ -1.62
HOXA9-206ENST00000497089 RNASE2P10153 161 aaKnown RBP4.92□□□□□ -1.62
HOXA9-206ENST00000497089 RPL7P18124 248 aaKnown RBP4.92□□□□□ -1.62
HOXA9-206ENST00000497089 LINC00205P59089 165 aa4.92□□□□□ -1.62
HOXA9-206ENST00000497089 C9orf66Q5T8R8 295 aa4.92□□□□□ -1.62
HOXA9-206ENST00000497089 SIGLEC15Q6ZMC9 328 aa4.92□□□□□ -1.62
HOXA9-206ENST00000497089 LINC00305Q7Z4B0 112 aa4.92□□□□□ -1.62
HOXA9-206ENST00000497089 MAPKAPK5-AS1Q8N8E1 139 aa4.92□□□□□ -1.62
HOXA9-206ENST00000497089 Q8N8P6 123 aa4.92□□□□□ -1.62
HOXA9-206ENST00000497089 BAALCQ8WXS3 180 aa4.92□□□□□ -1.62
HOXA9-206ENST00000497089 UBE2WQ96B02 151 aa4.92□□□□□ -1.62
HOXA9-206ENST00000497089 FLYWCH2Q96CP2 140 aaKnown RBP4.92□□□□□ -1.62
HOXA9-206ENST00000497089 DUX3Q96PT4 197 aa4.92□□□□□ -1.62
HOXA9-206ENST00000497089 ODF3Q96PU9 254 aa4.92□□□□□ -1.62
HOXA9-206ENST00000497089 CMYA5Q8N3K9 4069 aa4.92□□□□□ -1.62
HOXA9-206ENST00000497089 TNCP24821 2201 aa4.92□□□□□ -1.62
HOXA9-206ENST00000497089 SORL1Q92673 2214 aa4.92□□□□□ -1.62
HOXA9-206ENST00000497089 COL7A1Q02388 2944 aa4.92□□□□□ -1.62
HOXA9-206ENST00000497089 IGKV1OR2-108A0A075B7D4 117 aa4.91□□□□□ -1.62
HOXA9-206ENST00000497089 TRAV8-1A0A0A6YYK1 113 aa4.91□□□□□ -1.62
HOXA9-206ENST00000497089 TRAV3A0A0B4J244 114 aa4.91□□□□□ -1.62
HOXA9-206ENST00000497089 F8VRH5 84 aa4.91□□□□□ -1.62
HOXA9-206ENST00000497089 LGALS9O00182 355 aa4.91□□□□□ -1.62
HOXA9-206ENST00000497089 ORM1P02763 201 aa4.91□□□□□ -1.62
HOXA9-206ENST00000497089 HERVK_113P61574 105 aa4.91□□□□□ -1.62
HOXA9-206ENST00000497089 HERVK_113P63121 156 aa4.91□□□□□ -1.62
HOXA9-206ENST00000497089 SRSF9Q13242 221 aaKnown RBP eCLIP4.91□□□□□ -1.62
HOXA9-206ENST00000497089 PRNTQ86SH4 94 aa4.91□□□□□ -1.62
HOXA9-206ENST00000497089 AMN1Q8IY45 258 aa4.91□□□□□ -1.62
HOXA9-206ENST00000497089 LYPD1Q8N2G4 141 aa4.91□□□□□ -1.62
HOXA9-206ENST00000497089 TRBV10-2A0A0K0K1G8 114 aa4.91□□□□□ -1.62
HOXA9-206ENST00000497089 H3BT86 120 aa4.91□□□□□ -1.62
HOXA9-206ENST00000497089 H3BUA1 57 aa4.91□□□□□ -1.62
HOXA9-206ENST00000497089 GP9P14770 177 aa4.91□□□□□ -1.62
HOXA9-206ENST00000497089 EDN2P20800 178 aa4.91□□□□□ -1.62
HOXA9-206ENST00000497089 TMEM258P61165 79 aa4.91□□□□□ -1.62
HOXA9-206ENST00000497089 ECSCRQ19T08 205 aa4.91□□□□□ -1.62
HOXA9-206ENST00000497089 MRGPRG-AS1Q2M3A8 158 aa4.91□□□□□ -1.62
HOXA9-206ENST00000497089 PAPPA-AS1Q5QFB9 102 aa4.91□□□□□ -1.62
HOXA9-206ENST00000497089 C10orf25Q5T742 122 aa4.91□□□□□ -1.62
HOXA9-206ENST00000497089 MORN5Q5VZ52 161 aa4.91□□□□□ -1.62
HOXA9-206ENST00000497089 GAGE2AQ6NT46 116 aa4.91□□□□□ -1.62
HOXA9-206ENST00000497089 PATE2Q6UY27 113 aa4.91□□□□□ -1.62
HOXA9-206ENST00000497089 SCGB1D4Q6XE38 83 aa4.91□□□□□ -1.62
HOXA9-206ENST00000497089 ZFP2Q6ZN57 461 aa4.91□□□□□ -1.62
HOXA9-206ENST00000497089 KIR2DL5BQ8NHK3 375 aa4.91□□□□□ -1.62
HOXA9-206ENST00000497089 MPLKIPQ8TAP9 179 aa4.91□□□□□ -1.62
HOXA9-206ENST00000497089 NTN5Q8WTR8 489 aaPredicted RBP4.91□□□□□ -1.62
HOXA9-206ENST00000497089 B9D2Q9BPU9 175 aa4.91□□□□□ -1.62
HOXA9-206ENST00000497089 TTTY13Q9BZ97 58 aa4.91□□□□□ -1.62
HOXA9-206ENST00000497089 MRPL35Q9NZE8 188 aaKnown RBP4.91□□□□□ -1.62
HOXA9-206ENST00000497089 PRO1854Q9UHT4 67 aa4.91□□□□□ -1.62
HOXA9-206ENST00000497089 TMSB15BA0A087X1C1 80 aa4.9□□□□□ -1.63
HOXA9-206ENST00000497089 ZNF815PA8K554 130 aa4.9□□□□□ -1.63
HOXA9-206ENST00000497089 K7EMI3 77 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms