RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 TIMM9Q9Y5J7 89 aa1.08□□□□□ -2.24
UBR4-217ENST00000497018 IER3IP1Q9Y5U9 82 aa1.08□□□□□ -2.24
UBR4-217ENST00000497018 SOX21Q9Y651 276 aaPredicted RBP1.08□□□□□ -2.24
UBR4-217ENST00000497018 TCHHQ07283 1943 aa1.08□□□□□ -2.24
UBR4-217ENST00000497018 DYNC2H1Q8NCM8 4307 aaKnown RBP1.08□□□□□ -2.24
UBR4-217ENST00000497018 CPAMD8Q8IZJ3 1885 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 FLG2Q5D862 2391 aaPredicted RBP1.07□□□□□ -2.24
UBR4-217ENST00000497018 LYSTQ99698 3801 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 WNK2Q9Y3S1 2297 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 DNAH1Q9P2D7 4330 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 A0A087WSZ3 146 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 TRAV30A0A087WSZ9 112 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 IGKV2D-26A0A0A0MRZ7 120 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.07□□□□□ -2.24
UBR4-217ENST00000497018 TRAV40A0A0B4J280 105 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 MUC21A0A0G2JKD1 596 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 A0A0J9YX75 114 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 MUC21A0A140T8X8 626 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 A0A1W2PNM2 257 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 IBA57-AS1B1ANH7 110 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 K7EIL1 84 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 M0R129 80 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 M0R2P5 195 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 MT-ND6P03923 174 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 ZNF705BP0CI00 300 aaPredicted RBP1.07□□□□□ -2.24
UBR4-217ENST00000497018 TPT1P13693 172 aaKnown RBP1.07□□□□□ -2.24
UBR4-217ENST00000497018 ASIPP42127 132 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 GNG4P50150 75 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 SS18Q15532 418 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 ASB16-AS1Q495Z4 193 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 C1orf134Q5TEV5 83 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 ZNF826PQ6ZT77 177 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 GKN2Q86XP6 184 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 KRTAP11-1Q8IUC1 163 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 LINC00269Q8N2A0 174 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 PLPP5Q8NEB5 264 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 CIB3Q96Q77 187 aaPredicted RBP1.07□□□□□ -2.24
UBR4-217ENST00000497018 RETNLBQ9BQ08 111 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 MRPL57Q9BQC6 102 aaKnown RBP1.07□□□□□ -2.24
UBR4-217ENST00000497018 LINC00467Q9BRT7 94 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 AGPAT4-IT1Q9H0P7 198 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 CXCL16Q9H2A7 254 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 DUSP21Q9H596 190 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 NHP2Q9NX24 153 aaKnown RBP1.07□□□□□ -2.24
UBR4-217ENST00000497018 PRO2289Q9P1D8 64 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 METTL1Q9UBP6 276 aaKnown RBP1.07□□□□□ -2.24
UBR4-217ENST00000497018 PSORS1C2Q9UIG4 136 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 RPL26L1Q9UNX3 145 aaKnown RBP1.07□□□□□ -2.24
UBR4-217ENST00000497018 LHFPL6Q9Y693 200 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 ROS1P08922 2347 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 MALRD1Q5VYJ5 2156 aa1.07□□□□□ -2.24
UBR4-217ENST00000497018 NACAE9PAV3 2078 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 CSMD3Q7Z407 3707 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 ALPK2Q86TB3 2170 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 IGKV1D-42A0A075B6H8 117 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 IGKV2-28A0A075B6P5 120 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 IGKV2D-24A0A075B6R9 120 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 TRAV3A0A0B4J244 114 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 TRAV17A0A0B4J275 112 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 M0R143 59 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 TNFP01375 233 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 IFNA17P01571 189 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 IGKV2D-28P01615 120 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 SAA1P0DJI8 122 aaPredicted RBP1.06□□□□□ -2.24
UBR4-217ENST00000497018 MIFP14174 115 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 FABP4P15090 132 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 PEBP1P30086 187 aaKnown RBP1.06□□□□□ -2.24
UBR4-217ENST00000497018 GUCA1AP43080 201 aaPredicted RBP1.06□□□□□ -2.24
UBR4-217ENST00000497018 PKIAP61925 76 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 UBA52P62987 128 aaKnown RBP1.06□□□□□ -2.24
UBR4-217ENST00000497018 ZNF90Q03938 601 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 HSD52Q0P140 79 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 ZNF345Q14585 488 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 KRTAP20-1Q3LI63 56 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 CLLU1Q5K131 121 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 NCMAPQ5T1S8 102 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 KRTAP26-1Q6PEX3 210 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 FP248Q71RG6 208 aaPredicted RBP1.06□□□□□ -2.24
UBR4-217ENST00000497018 OR5AS1Q8N127 324 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 FAM19A2Q8N3H0 131 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 CLEC2BQ92478 149 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 POP5Q969H6 163 aaKnown RBP1.06□□□□□ -2.24
UBR4-217ENST00000497018 HYLS1Q96M11 299 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 Q9BRP9 147 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 SLC50A1Q9BRV3 221 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 HIGD2AQ9BW72 106 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 SNHG12Q9BXW3 62 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 SAR1AQ9NR31 198 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 TAS2R4Q9NYW5 299 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 FRAS1Q86XX4 4008 aa1.06□□□□□ -2.24
UBR4-217ENST00000497018 CMYA5Q8N3K9 4069 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 MYH11P35749 1972 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 MPDZO75970 2070 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 IGLV10-54A0A075B6I4 117 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 TMSB15BA0A087X1C1 80 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 IGKV3D-11A0A0A0MRZ8 115 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 SPTY2D1-AS1A0A0U1RR47 76 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 TMEM218A2RU14 115 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 BBIP1A8MTZ0 92 aa1.05□□□□□ -2.24
UBR4-217ENST00000497018 E7EQL1 145 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms