RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 ATRAIDQ6UW56 229 aa12.88□□□□□ -0.35
CTDSP1-213ENST00000496785 LINC00862A6NCI5 91 aa12.87□□□□□ -0.35
CTDSP1-213ENST00000496785 I3L3M4 83 aa12.87□□□□□ -0.35
CTDSP1-213ENST00000496785 APCSP02743 223 aa12.87□□□□□ -0.35
CTDSP1-213ENST00000496785 PMCHP20382 165 aa12.87□□□□□ -0.35
CTDSP1-213ENST00000496785 RBX1P62877 108 aa12.87□□□□□ -0.35
CTDSP1-213ENST00000496785 CDPF1Q6NVV7 123 aa12.87□□□□□ -0.35
CTDSP1-213ENST00000496785 SEC11CQ9BY50 192 aa12.87□□□□□ -0.35
CTDSP1-213ENST00000496785 PGPEP1Q9NXJ5 209 aa12.87□□□□□ -0.35
CTDSP1-213ENST00000496785 IGKV2D-24A0A075B6R9 120 aa12.85□□□□□ -0.35
CTDSP1-213ENST00000496785 A0A1B0GUV1 79 aa12.85□□□□□ -0.35
CTDSP1-213ENST00000496785 A0A1B0GXF2 115 aa12.85□□□□□ -0.35
CTDSP1-213ENST00000496785 Q8N976 141 aa12.85□□□□□ -0.35
CTDSP1-213ENST00000496785 TMEM70Q9BUB7 260 aa12.85□□□□□ -0.35
CTDSP1-213ENST00000496785 C1orf43Q9BWL3 253 aa12.85□□□□□ -0.35
CTDSP1-213ENST00000496785 H7C423 109 aa12.84□□□□□ -0.35
CTDSP1-213ENST00000496785 ADCYAP1P18509 176 aa12.84□□□□□ -0.35
CTDSP1-213ENST00000496785 MIAQ16674 131 aa12.84□□□□□ -0.35
CTDSP1-213ENST00000496785 CTDSP1Q9GZU7 261 aa12.84□□□□□ -0.35
CTDSP1-213ENST00000496785 CKS2P33552 79 aa12.83□□□□□ -0.36
CTDSP1-213ENST00000496785 MRPL51Q4U2R6 128 aaKnown RBP12.83□□□□□ -0.36
CTDSP1-213ENST00000496785 BTF3L4Q96K17 158 aa12.83□□□□□ -0.36
CTDSP1-213ENST00000496785 TRBV27A0A0K0K1C4 114 aa12.82□□□□□ -0.36
CTDSP1-213ENST00000496785 LRCOL1A6NCL2 159 aa12.82□□□□□ -0.36
CTDSP1-213ENST00000496785 VCYO14598 125 aa12.82□□□□□ -0.36
CTDSP1-213ENST00000496785 PPBPP02775 128 aa12.82□□□□□ -0.36
CTDSP1-213ENST00000496785 RPS10P46783 165 aaKnown RBP12.82□□□□□ -0.36
CTDSP1-213ENST00000496785 POLR2KP53803 58 aaKnown RBP12.82□□□□□ -0.36
CTDSP1-213ENST00000496785 SUMO2P61956 95 aaKnown RBP12.82□□□□□ -0.36
CTDSP1-213ENST00000496785 AMMECR1LQ6DCA0 310 aa12.82□□□□□ -0.36
CTDSP1-213ENST00000496785 IMMP2LQ96T52 175 aa12.82□□□□□ -0.36
CTDSP1-213ENST00000496785 PRR34Q9NV39 138 aa12.82□□□□□ -0.36
CTDSP1-213ENST00000496785 SMKR1H3BMG3 65 aa12.81□□□□□ -0.36
CTDSP1-213ENST00000496785 GAS8-AS1O95177 125 aa12.81□□□□□ -0.36
CTDSP1-213ENST00000496785 KRTAP10-2P60368 255 aa12.81□□□□□ -0.36
CTDSP1-213ENST00000496785 ENHOQ6UWT2 76 aa12.81□□□□□ -0.36
CTDSP1-213ENST00000496785 DEFB104AQ8WTQ1 72 aa12.81□□□□□ -0.36
CTDSP1-213ENST00000496785 NTN5Q8WTR8 489 aaPredicted RBP12.81□□□□□ -0.36
CTDSP1-213ENST00000496785 KIR2DL4Q99706 377 aa12.81□□□□□ -0.36
CTDSP1-213ENST00000496785 C20orf78Q9BR46 151 aa12.81□□□□□ -0.36
CTDSP1-213ENST00000496785 TCAPO15273 167 aa12.8□□□□□ -0.36
CTDSP1-213ENST00000496785 LINC00269Q8N2A0 174 aa12.8□□□□□ -0.36
CTDSP1-213ENST00000496785 NRACQ8N912 160 aa12.8□□□□□ -0.36
CTDSP1-213ENST00000496785 TRBV24-1A0A075B6N3 115 aa12.79□□□□□ -0.36
CTDSP1-213ENST00000496785 PHOX2AO14813 284 aa12.79□□□□□ -0.36
CTDSP1-213ENST00000496785 ZNF25P17030 456 aaPredicted RBP12.79□□□□□ -0.36
CTDSP1-213ENST00000496785 FCER1GP30273 86 aa12.79□□□□□ -0.36
CTDSP1-213ENST00000496785 REG3AQ06141 175 aa12.79□□□□□ -0.36
CTDSP1-213ENST00000496785 Q8N814 137 aa12.79□□□□□ -0.36
CTDSP1-213ENST00000496785 C20orf203Q8NBC4 194 aa12.79□□□□□ -0.36
CTDSP1-213ENST00000496785 TMEM242Q9NWH2 141 aa12.79□□□□□ -0.36
CTDSP1-213ENST00000496785 TRAV8-4A0A0B4J246 113 aa12.78□□□□□ -0.36
CTDSP1-213ENST00000496785 TSHBP01222 138 aa12.78□□□□□ -0.36
CTDSP1-213ENST00000496785 SMAGPQ0VAQ4 97 aa12.78□□□□□ -0.36
CTDSP1-213ENST00000496785 PKD1P98161 4303 aa12.78□□□□□ -0.36
CTDSP1-213ENST00000496785 TRAV9-1A0A075B6T8 112 aa12.77□□□□□ -0.37
CTDSP1-213ENST00000496785 D6R8Y8 96 aa12.77□□□□□ -0.37
CTDSP1-213ENST00000496785 S100PP25815 95 aa12.77□□□□□ -0.37
CTDSP1-213ENST00000496785 RPL32P62910 135 aaKnown RBP12.77□□□□□ -0.37
CTDSP1-213ENST00000496785 RNASEKQ6P5S7 137 aaKnown RBP12.77□□□□□ -0.37
CTDSP1-213ENST00000496785 ORMDL3Q8N138 153 aa12.77□□□□□ -0.37
CTDSP1-213ENST00000496785 TMEM101Q96IK0 257 aa12.77□□□□□ -0.37
CTDSP1-213ENST00000496785 IGLV4-60A0A075B6I1 120 aa12.76□□□□□ -0.37
CTDSP1-213ENST00000496785 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.76□□□□□ -0.37
CTDSP1-213ENST00000496785 IGKV2-29A2NJV5 120 aaPredicted RBP12.76□□□□□ -0.37
CTDSP1-213ENST00000496785 C7orf77A4D0Y5 90 aa12.76□□□□□ -0.37
CTDSP1-213ENST00000496785 TNFRSF6BO95407 300 aa12.76□□□□□ -0.37
CTDSP1-213ENST00000496785 FGF6P10767 208 aa12.76□□□□□ -0.37
CTDSP1-213ENST00000496785 ESDP10768 282 aa12.76□□□□□ -0.37
CTDSP1-213ENST00000496785 C14orf177Q52M58 125 aa12.76□□□□□ -0.37
CTDSP1-213ENST00000496785 C10orf91Q5T1B1 145 aa12.76□□□□□ -0.37
CTDSP1-213ENST00000496785 CLPSL2Q6UWE3 100 aa12.76□□□□□ -0.37
CTDSP1-213ENST00000496785 CARHSP1Q9Y2V2 147 aaKnown RBP12.76□□□□□ -0.37
CTDSP1-213ENST00000496785 RHEBQ15382 184 aa12.75□□□□□ -0.37
CTDSP1-213ENST00000496785 BAALCQ8WXS3 180 aa12.75□□□□□ -0.37
CTDSP1-213ENST00000496785 TMEM18Q96B42 140 aa12.75□□□□□ -0.37
CTDSP1-213ENST00000496785 LAMTOR2Q9Y2Q5 125 aa12.75□□□□□ -0.37
CTDSP1-213ENST00000496785 IGLV5-52A0A0A0MRZ9 124 aa12.74□□□□□ -0.37
CTDSP1-213ENST00000496785 NDUFA5Q16718 116 aa12.74□□□□□ -0.37
CTDSP1-213ENST00000496785 TMEM136Q6ZRR5 245 aa12.74□□□□□ -0.37
CTDSP1-213ENST00000496785 SMIM2Q9BVW6 85 aa12.74□□□□□ -0.37
CTDSP1-213ENST00000496785 HLA-DQA1P01909 254 aa12.73□□□□□ -0.37
CTDSP1-213ENST00000496785 MAPKAPK5-AS1Q8N8E1 139 aa12.73□□□□□ -0.37
CTDSP1-213ENST00000496785 OR5A1Q8NGJ0 315 aa12.73□□□□□ -0.37
CTDSP1-213ENST00000496785 PRELID3AQ96N28 172 aa12.73□□□□□ -0.37
CTDSP1-213ENST00000496785 PKHD1P08F94 4074 aa12.73□□□□□ -0.37
CTDSP1-213ENST00000496785 LECT2O14960 151 aa12.72□□□□□ -0.37
CTDSP1-213ENST00000496785 CDK2AP2O75956 126 aa12.72□□□□□ -0.37
CTDSP1-213ENST00000496785 MRPL52Q86TS9 123 aaKnown RBP12.72□□□□□ -0.37
CTDSP1-213ENST00000496785 NPYP01303 97 aa12.71□□□□□ -0.37
CTDSP1-213ENST00000496785 GCSHP23434 173 aa12.71□□□□□ -0.37
CTDSP1-213ENST00000496785 DGAT2L7PQ6IED9 249 aa12.71□□□□□ -0.37
CTDSP1-213ENST00000496785 CLRN3Q8NCR9 226 aa12.71□□□□□ -0.37
CTDSP1-213ENST00000496785 DNAH11Q96DT5 4516 aa12.7□□□□□ -0.38
CTDSP1-213ENST00000496785 WFDC2Q14508 124 aa12.7□□□□□ -0.38
CTDSP1-213ENST00000496785 COX19Q49B96 90 aa12.7□□□□□ -0.38
CTDSP1-213ENST00000496785 RPS10P5Q9NQ39 176 aa12.7□□□□□ -0.38
CTDSP1-213ENST00000496785 IGLV10-54A0A075B6I4 117 aa12.69□□□□□ -0.38
CTDSP1-213ENST00000496785 MAP1LC3AQ9H492 121 aa12.69□□□□□ -0.38
CTDSP1-213ENST00000496785 RAB5AP20339 215 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms