RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 CRYGDP07320 174 aa12.13□□□□□ -0.47
LMNA-216ENST00000496738 LINC00315P59091 139 aa12.13□□□□□ -0.47
LMNA-216ENST00000496738 ZNF56Q15929 161 aa12.13□□□□□ -0.47
LMNA-216ENST00000496738 C5orf47Q569G3 176 aa12.12□□□□□ -0.47
LMNA-216ENST00000496738 URB1-AS1Q96HZ7 61 aa12.12□□□□□ -0.47
LMNA-216ENST00000496738 DEFB4AO15263 64 aa12.12□□□□□ -0.47
LMNA-216ENST00000496738 F8W1H4 67 aa12.11□□□□□ -0.47
LMNA-216ENST00000496738 M0QXV9 152 aa12.11□□□□□ -0.47
LMNA-216ENST00000496738 RPL39LQ96EH5 51 aaKnown RBP12.11□□□□□ -0.47
LMNA-216ENST00000496738 RETNQ9HD89 108 aa12.11□□□□□ -0.47
LMNA-216ENST00000496738 TNFRSF6BO95407 300 aa12.1□□□□□ -0.47
LMNA-216ENST00000496738 COX8AP10176 69 aa12.1□□□□□ -0.47
LMNA-216ENST00000496738 SUMO4Q6EEV6 95 aa12.1□□□□□ -0.47
LMNA-216ENST00000496738 VCX2Q9H322 139 aa12.1□□□□□ -0.47
LMNA-216ENST00000496738 GAGE7O76087 117 aa12.1□□□□□ -0.47
LMNA-216ENST00000496738 GAGE12FP0CL80 117 aa12.1□□□□□ -0.47
LMNA-216ENST00000496738 GAGE12GP0CL81 117 aa12.1□□□□□ -0.47
LMNA-216ENST00000496738 GAGE12IP0CL82 117 aa12.1□□□□□ -0.47
LMNA-216ENST00000496738 CFAP126Q5VTH2 177 aa12.1□□□□□ -0.47
LMNA-216ENST00000496738 RASL10AQ92737 203 aa12.1□□□□□ -0.47
LMNA-216ENST00000496738 NBEAL2Q6ZNJ1 2754 aa12.09□□□□□ -0.47
LMNA-216ENST00000496738 A0A087WX48 190 aa12.09□□□□□ -0.47
LMNA-216ENST00000496738 IGHV3-53P01767 116 aa12.09□□□□□ -0.47
LMNA-216ENST00000496738 NRACQ8N912 160 aa12.09□□□□□ -0.47
LMNA-216ENST00000496738 A8MWV9 139 aa12.09□□□□□ -0.47
LMNA-216ENST00000496738 A8MZ25 164 aa12.09□□□□□ -0.47
LMNA-216ENST00000496738 DAZ2Q13117 558 aaKnown RBP12.09□□□□□ -0.47
LMNA-216ENST00000496738 IFI27P40305 119 aaPredicted RBP12.08□□□□□ -0.48
LMNA-216ENST00000496738 POM121L12Q8N7R1 296 aa12.08□□□□□ -0.48
LMNA-216ENST00000496738 PTH2Q96A98 100 aa12.08□□□□□ -0.48
LMNA-216ENST00000496738 CDIP1Q9H305 208 aa12.08□□□□□ -0.48
LMNA-216ENST00000496738 NOTCH1P46531 2555 aa12.08□□□□□ -0.48
LMNA-216ENST00000496738 IGHV4-28A0A0C4DH34 117 aa12.08□□□□□ -0.48
LMNA-216ENST00000496738 SYS1-DBNDD2H3BUS1 97 aa12.08□□□□□ -0.48
LMNA-216ENST00000496738 CHCHD1Q96BP2 118 aaKnown RBP12.08□□□□□ -0.48
LMNA-216ENST00000496738 K7EIL1 84 aa12.07□□□□□ -0.48
LMNA-216ENST00000496738 PRSS3P2Q8NHM4 247 aa12.07□□□□□ -0.48
LMNA-216ENST00000496738 SMIM9A6NGZ8 99 aa12.07□□□□□ -0.48
LMNA-216ENST00000496738 WFDC2Q14508 124 aa12.07□□□□□ -0.48
LMNA-216ENST00000496738 TM2D2Q9BX73 214 aa12.07□□□□□ -0.48
LMNA-216ENST00000496738 TRGV2A0A075B6R0 118 aa12.06□□□□□ -0.48
LMNA-216ENST00000496738 RS1O15537 224 aa12.06□□□□□ -0.48
LMNA-216ENST00000496738 MT-ATP8P03928 68 aa12.06□□□□□ -0.48
LMNA-216ENST00000496738 DEFB121Q5J5C9 76 aa12.06□□□□□ -0.48
LMNA-216ENST00000496738 PIK3CD-AS1Q5SR53 167 aa12.06□□□□□ -0.48
LMNA-216ENST00000496738 Q6ZSN1 163 aa12.06□□□□□ -0.48
LMNA-216ENST00000496738 OVOL2Q9BRP0 275 aa12.06□□□□□ -0.48
LMNA-216ENST00000496738 MAP1LC3AQ9H492 121 aa12.06□□□□□ -0.48
LMNA-216ENST00000496738 DEFB130BP0DP73 79 aa12.06□□□□□ -0.48
LMNA-216ENST00000496738 DEFB130AP0DP74 79 aa12.06□□□□□ -0.48
LMNA-216ENST00000496738 LGALS9BQ3B8N2 356 aa12.06□□□□□ -0.48
LMNA-216ENST00000496738 RAB37Q96AX2 223 aa12.06□□□□□ -0.48
LMNA-216ENST00000496738 NACAE9PAV3 2078 aa12.05□□□□□ -0.48
LMNA-216ENST00000496738 P0DMU3 169 aa12.05□□□□□ -0.48
LMNA-216ENST00000496738 FAM231AP0DMU4 169 aa12.05□□□□□ -0.48
LMNA-216ENST00000496738 FAM231CP0DMU5 169 aa12.05□□□□□ -0.48
LMNA-216ENST00000496738 KPRPQ5T749 579 aaPredicted RBP12.05□□□□□ -0.48
LMNA-216ENST00000496738 Q6ZUT4 128 aa12.05□□□□□ -0.48
LMNA-216ENST00000496738 IGHV1-24A0A0C4DH33 117 aa12.05□□□□□ -0.48
LMNA-216ENST00000496738 NHLRC4P0CG21 123 aaPredicted RBP12.05□□□□□ -0.48
LMNA-216ENST00000496738 DEFB104AQ8WTQ1 72 aa12.05□□□□□ -0.48
LMNA-216ENST00000496738 PPDPFQ9H3Y8 114 aa12.05□□□□□ -0.48
LMNA-216ENST00000496738 AP5S1Q9NUS5 200 aa12.05□□□□□ -0.48
LMNA-216ENST00000496738 MGAM2Q2M2H8 2515 aa12.04□□□□□ -0.48
LMNA-216ENST00000496738 M0QY20 66 aa12.04□□□□□ -0.48
LMNA-216ENST00000496738 ETDBQ3ZM63 59 aa12.04□□□□□ -0.48
LMNA-216ENST00000496738 Q8NAQ8 132 aa12.04□□□□□ -0.48
LMNA-216ENST00000496738 FAM222AQ5U5X8 452 aa12.03□□□□□ -0.48
LMNA-216ENST00000496738 C20orf78Q9BR46 151 aa12.03□□□□□ -0.48
LMNA-216ENST00000496738 DNAH3Q8TD57 4116 aa12.03□□□□□ -0.48
LMNA-216ENST00000496738 GAGE12JA6NER3 117 aa12.03□□□□□ -0.48
LMNA-216ENST00000496738 GAGE4Q13068 117 aa12.03□□□□□ -0.48
LMNA-216ENST00000496738 SH2D6Q7Z4S9 175 aa12.03□□□□□ -0.48
LMNA-216ENST00000496738 MRAPQ8TCY5 172 aa12.03□□□□□ -0.48
LMNA-216ENST00000496738 Q9UF83 564 aa12.03□□□□□ -0.48
LMNA-216ENST00000496738 NBEAL1Q6ZS30 2694 aa12.03□□□□□ -0.48
LMNA-216ENST00000496738 MIFP14174 115 aa12.02□□□□□ -0.48
LMNA-216ENST00000496738 SBSPONQ8IVN8 264 aa12.02□□□□□ -0.48
LMNA-216ENST00000496738 CSDC2Q9Y534 153 aaKnown RBP12.02□□□□□ -0.48
LMNA-216ENST00000496738 RHODO00212 210 aa12.02□□□□□ -0.49
LMNA-216ENST00000496738 FGF6P10767 208 aa12.02□□□□□ -0.49
LMNA-216ENST00000496738 XGP55808 180 aa12.02□□□□□ -0.49
LMNA-216ENST00000496738 SUMO2P61956 95 aaKnown RBP12.02□□□□□ -0.49
LMNA-216ENST00000496738 TRAV4A0A0B4J268 109 aa12.01□□□□□ -0.49
LMNA-216ENST00000496738 CELA1Q9UNI1 258 aa12.01□□□□□ -0.49
LMNA-216ENST00000496738 SMIM2Q9BVW6 85 aa12□□□□□ -0.49
LMNA-216ENST00000496738 SPANXA1Q9NS26 97 aa12□□□□□ -0.49
LMNA-216ENST00000496738 IGLV2-18A0A075B6J9 118 aa11.99□□□□□ -0.49
LMNA-216ENST00000496738 LEPROTL1O95214 131 aa11.99□□□□□ -0.49
LMNA-216ENST00000496738 ZFP2Q6ZN57 461 aa11.99□□□□□ -0.49
LMNA-216ENST00000496738 LINC00173Q6ZV60 143 aa11.99□□□□□ -0.49
LMNA-216ENST00000496738 Q8N8P6 123 aa11.99□□□□□ -0.49
LMNA-216ENST00000496738 NXT2Q9NPJ8 142 aaKnown RBP11.99□□□□□ -0.49
LMNA-216ENST00000496738 DKK2Q9UBU2 259 aa11.99□□□□□ -0.49
LMNA-216ENST00000496738 PPP1R17O96001 155 aa11.98□□□□□ -0.49
LMNA-216ENST00000496738 ZFAND6Q6FIF0 208 aa11.98□□□□□ -0.49
LMNA-216ENST00000496738 SDHAF1A6NFY7 115 aa11.98□□□□□ -0.49
LMNA-216ENST00000496738 H7C1H1 209 aa11.98□□□□□ -0.49
LMNA-216ENST00000496738 TP53TG1Q9Y2A0 90 aa11.98□□□□□ -0.49
LMNA-216ENST00000496738 SMIM13P0DJ93 91 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 280.5 ms