RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 H3BMG7 143 aa10.9□□□□□ -0.67
UBXN11-216ENST00000496466 J3QQQ9 107 aa10.9□□□□□ -0.67
UBXN11-216ENST00000496466 MAP6D1Q9H9H5 199 aa10.9□□□□□ -0.67
UBXN11-216ENST00000496466 PGPEP1Q9NXJ5 209 aa10.9□□□□□ -0.67
UBXN11-216ENST00000496466 ITPR2Q14571 2701 aa10.89□□□□□ -0.67
UBXN11-216ENST00000496466 IGLV4-3A0A075B6K6 122 aa10.89□□□□□ -0.67
UBXN11-216ENST00000496466 A0A1W2PRX2 142 aa10.89□□□□□ -0.67
UBXN11-216ENST00000496466 M0R2P5 195 aa10.89□□□□□ -0.67
UBXN11-216ENST00000496466 TMEM223A0PJW6 202 aa10.89□□□□□ -0.67
UBXN11-216ENST00000496466 DYNLRB2Q8TF09 96 aa10.89□□□□□ -0.67
UBXN11-216ENST00000496466 RAX2Q96IS3 184 aa10.89□□□□□ -0.67
UBXN11-216ENST00000496466 NF1P21359 2839 aa10.89□□□□□ -0.67
UBXN11-216ENST00000496466 CUBNO60494 3623 aa10.88□□□□□ -0.67
UBXN11-216ENST00000496466 A8MWV9 139 aa10.88□□□□□ -0.67
UBXN11-216ENST00000496466 CD28P10747 220 aa10.88□□□□□ -0.67
UBXN11-216ENST00000496466 ZNF415Q09FC8 603 aa10.88□□□□□ -0.67
UBXN11-216ENST00000496466 DEFB114Q30KQ6 69 aa10.88□□□□□ -0.67
UBXN11-216ENST00000496466 ETDBQ3ZM63 59 aa10.88□□□□□ -0.67
UBXN11-216ENST00000496466 SLC25A29Q8N8R3 303 aa10.88□□□□□ -0.67
UBXN11-216ENST00000496466 MRPL16Q9NX20 251 aaKnown RBP10.88□□□□□ -0.67
UBXN11-216ENST00000496466 LEPROTO15243 131 aa10.87□□□□□ -0.67
UBXN11-216ENST00000496466 ZNF22P17026 224 aaPredicted RBP10.87□□□□□ -0.67
UBXN11-216ENST00000496466 LGALS3P17931 250 aaKnown RBP10.87□□□□□ -0.67
UBXN11-216ENST00000496466 VCX2Q9H322 139 aa10.87□□□□□ -0.67
UBXN11-216ENST00000496466 GEMIN7Q9H840 131 aaKnown RBP10.87□□□□□ -0.67
UBXN11-216ENST00000496466 PRO0461Q9UI25 63 aa10.87□□□□□ -0.67
UBXN11-216ENST00000496466 A0A0J9YXV3 536 aa10.87□□□□□ -0.67
UBXN11-216ENST00000496466 IGHV3-30P01768 117 aa10.87□□□□□ -0.67
UBXN11-216ENST00000496466 IGHV3-30-5P0DP03 117 aa10.87□□□□□ -0.67
UBXN11-216ENST00000496466 Q6ZSN1 163 aa10.87□□□□□ -0.67
UBXN11-216ENST00000496466 SH2D6Q7Z4S9 175 aa10.87□□□□□ -0.67
UBXN11-216ENST00000496466 RHODO00212 210 aa10.86□□□□□ -0.67
UBXN11-216ENST00000496466 PIK3CD-AS1Q5SR53 167 aa10.86□□□□□ -0.67
UBXN11-216ENST00000496466 FAM104AQ969W3 186 aa10.86□□□□□ -0.67
UBXN11-216ENST00000496466 PTH2Q96A98 100 aa10.86□□□□□ -0.67
UBXN11-216ENST00000496466 PYGO1Q9Y3Y4 419 aa10.86□□□□□ -0.67
UBXN11-216ENST00000496466 TNFRSF18Q9Y5U5 241 aa10.86□□□□□ -0.67
UBXN11-216ENST00000496466 GAGE13Q4V321 117 aa10.86□□□□□ -0.67
UBXN11-216ENST00000496466 LINC01587Q99440 93 aa10.86□□□□□ -0.67
UBXN11-216ENST00000496466 Q9UF83 564 aa10.86□□□□□ -0.67
UBXN11-216ENST00000496466 NACAE9PAV3 2078 aa10.86□□□□□ -0.67
UBXN11-216ENST00000496466 APOMO95445 188 aa10.85□□□□□ -0.67
UBXN11-216ENST00000496466 TSPAN13O95857 204 aa10.85□□□□□ -0.67
UBXN11-216ENST00000496466 CFAP126Q5VTH2 177 aa10.85□□□□□ -0.67
UBXN11-216ENST00000496466 C11orf72Q8NBR9 251 aa10.85□□□□□ -0.67
UBXN11-216ENST00000496466 ZNF418Q8TF45 676 aaPredicted RBP10.85□□□□□ -0.67
UBXN11-216ENST00000496466 LINC00467Q9BRT7 94 aa10.85□□□□□ -0.67
UBXN11-216ENST00000496466 NDUFA11Q86Y39 141 aa10.85□□□□□ -0.67
UBXN11-216ENST00000496466 ATP6V0E2Q8NHE4 81 aa10.85□□□□□ -0.67
UBXN11-216ENST00000496466 UNC79Q9P2D8 2635 aa10.84□□□□□ -0.67
UBXN11-216ENST00000496466 IGHV3-64A0A075B6Q5 118 aa10.84□□□□□ -0.67
UBXN11-216ENST00000496466 CITED2Q99967 270 aaPredicted RBP10.84□□□□□ -0.67
UBXN11-216ENST00000496466 CCL24O00175 119 aa10.83□□□□□ -0.68
UBXN11-216ENST00000496466 INSP01308 110 aa10.83□□□□□ -0.68
UBXN11-216ENST00000496466 CFC1BP0CG36 223 aa10.83□□□□□ -0.68
UBXN11-216ENST00000496466 CFC1P0CG37 223 aa10.83□□□□□ -0.68
UBXN11-216ENST00000496466 FHL3Q13643 280 aa10.83□□□□□ -0.68
UBXN11-216ENST00000496466 CEMP1Q6PRD7 247 aaPredicted RBP10.83□□□□□ -0.68
UBXN11-216ENST00000496466 LINC01006Q8NI28 216 aa10.83□□□□□ -0.68
UBXN11-216ENST00000496466 SPXQ9BT56 116 aa10.83□□□□□ -0.68
UBXN11-216ENST00000496466 MTORP42345 2549 aa10.82□□□□□ -0.68
UBXN11-216ENST00000496466 INSL3P51460 131 aa10.82□□□□□ -0.68
UBXN11-216ENST00000496466 BEAN1Q3B7T3 259 aa10.82□□□□□ -0.68
UBXN11-216ENST00000496466 CHCHD7Q9BUK0 85 aa10.82□□□□□ -0.68
UBXN11-216ENST00000496466 RNASE1P07998 156 aaKnown RBP10.81□□□□□ -0.68
UBXN11-216ENST00000496466 UBE2D3P61077 147 aa10.81□□□□□ -0.68
UBXN11-216ENST00000496466 UBE2D2P62837 147 aa10.81□□□□□ -0.68
UBXN11-216ENST00000496466 SFTA2Q6UW10 78 aa10.81□□□□□ -0.68
UBXN11-216ENST00000496466 SETD2Q9BYW2 2564 aaPredicted RBP10.81□□□□□ -0.68
UBXN11-216ENST00000496466 ANK3Q12955 4377 aaKnown RBP10.81□□□□□ -0.68
UBXN11-216ENST00000496466 WNK1Q9H4A3 2382 aa10.81□□□□□ -0.68
UBXN11-216ENST00000496466 LOC107984156A0A0G2JMH3 177 aa10.81□□□□□ -0.68
UBXN11-216ENST00000496466 MRPS36P82909 103 aaKnown RBP10.81□□□□□ -0.68
UBXN11-216ENST00000496466 FOXI1Q12951 378 aa10.81□□□□□ -0.68
UBXN11-216ENST00000496466 ODF3L2Q3SX64 289 aa10.81□□□□□ -0.68
UBXN11-216ENST00000496466 ARL17AQ8IVW1 177 aa10.81□□□□□ -0.68
UBXN11-216ENST00000496466 CDIP1Q9H305 208 aa10.81□□□□□ -0.68
UBXN11-216ENST00000496466 RS1O15537 224 aa10.8□□□□□ -0.68
UBXN11-216ENST00000496466 IGHV3-53P01767 116 aa10.8□□□□□ -0.68
UBXN11-216ENST00000496466 SMR3AQ99954 134 aa10.8□□□□□ -0.68
UBXN11-216ENST00000496466 C1QTNF4Q9BXJ3 329 aa10.8□□□□□ -0.68
UBXN11-216ENST00000496466 RNASE13Q5GAN3 156 aaKnown RBP10.8□□□□□ -0.68
UBXN11-216ENST00000496466 DNAJC30Q96LL9 226 aa10.8□□□□□ -0.68
UBXN11-216ENST00000496466 PSMB2P49721 201 aa10.79□□□□□ -0.68
UBXN11-216ENST00000496466 C10orf126Q8N4M7 172 aa10.79□□□□□ -0.68
UBXN11-216ENST00000496466 C16orf95Q9H693 158 aa10.79□□□□□ -0.68
UBXN11-216ENST00000496466 XCL2Q9UBD3 114 aa10.79□□□□□ -0.68
UBXN11-216ENST00000496466 UBE2D4Q9Y2X8 147 aa10.79□□□□□ -0.68
UBXN11-216ENST00000496466 FASNP49327 2511 aaKnown RBP10.79□□□□□ -0.68
UBXN11-216ENST00000496466 GCN1Q92616 2671 aaKnown RBP10.79□□□□□ -0.68
UBXN11-216ENST00000496466 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.79□□□□□ -0.68
UBXN11-216ENST00000496466 TRAV25A0A0B4J276 109 aa10.79□□□□□ -0.68
UBXN11-216ENST00000496466 IGKV2-29A2NJV5 120 aaPredicted RBP10.79□□□□□ -0.68
UBXN11-216ENST00000496466 IGHV3-30-3P0DP02 117 aa10.79□□□□□ -0.68
UBXN11-216ENST00000496466 SPANXA1Q9NS26 97 aa10.79□□□□□ -0.68
UBXN11-216ENST00000496466 SPINK8P0C7L1 97 aa10.78□□□□□ -0.68
UBXN11-216ENST00000496466 IGHV3-38A0A0C4DH36 116 aa10.78□□□□□ -0.68
UBXN11-216ENST00000496466 A4D1N5 150 aa10.78□□□□□ -0.68
UBXN11-216ENST00000496466 TIMM21Q9BVV7 248 aa10.78□□□□□ -0.68
UBXN11-216ENST00000496466 PRO1854Q9UHT4 67 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms