RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 SCGB1C1Q8TD33 95 aa6.22□□□□□ -1.41
SMARCAL1-213ENST00000496037 BLNKQ8WV28 456 aa6.22□□□□□ -1.41
SMARCAL1-213ENST00000496037 LINC01600Q96MT4 127 aa6.22□□□□□ -1.41
SMARCAL1-213ENST00000496037 GPR82Q96P67 336 aa6.22□□□□□ -1.41
SMARCAL1-213ENST00000496037 SMIM7Q9BQ49 75 aa6.22□□□□□ -1.41
SMARCAL1-213ENST00000496037 UQCR10Q9UDW1 63 aa6.22□□□□□ -1.41
SMARCAL1-213ENST00000496037 TRAV8-6A0A0B4J262 113 aa6.21□□□□□ -1.42
SMARCAL1-213ENST00000496037 TRGV4A0A0C4DH28 118 aa6.21□□□□□ -1.42
SMARCAL1-213ENST00000496037 CEBPZOSA8MTT3 80 aa6.21□□□□□ -1.42
SMARCAL1-213ENST00000496037 IGHV3-30P01768 117 aa6.21□□□□□ -1.42
SMARCAL1-213ENST00000496037 IGHV3-33P01772 117 aa6.21□□□□□ -1.42
SMARCAL1-213ENST00000496037 IGHV3-30-3P0DP02 117 aa6.21□□□□□ -1.42
SMARCAL1-213ENST00000496037 IGHV3-30-5P0DP03 117 aa6.21□□□□□ -1.42
SMARCAL1-213ENST00000496037 GATA2P23769 480 aaPredicted RBP6.21□□□□□ -1.42
SMARCAL1-213ENST00000496037 S100A7P31151 101 aa6.21□□□□□ -1.42
SMARCAL1-213ENST00000496037 RPL23P62829 140 aaKnown RBP6.21□□□□□ -1.42
SMARCAL1-213ENST00000496037 SERF2P84101 59 aa6.21□□□□□ -1.42
SMARCAL1-213ENST00000496037 LYZL2Q7Z4W2 148 aa6.21□□□□□ -1.42
SMARCAL1-213ENST00000496037 Q8N976 141 aa6.21□□□□□ -1.42
SMARCAL1-213ENST00000496037 OR5C1Q8NGR4 320 aa6.21□□□□□ -1.42
SMARCAL1-213ENST00000496037 IL22RA2Q969J5 263 aa6.21□□□□□ -1.42
SMARCAL1-213ENST00000496037 VGLL1Q99990 258 aa6.21□□□□□ -1.42
SMARCAL1-213ENST00000496037 MANBALQ9NQG1 85 aa6.21□□□□□ -1.42
SMARCAL1-213ENST00000496037 CRCT1Q9UGL9 99 aa6.21□□□□□ -1.42
SMARCAL1-213ENST00000496037 TRAPPC1Q9Y5R8 145 aa6.21□□□□□ -1.42
SMARCAL1-213ENST00000496037 TMEM56-RWDD3S4R434 201 aa6.21□□□□□ -1.42
SMARCAL1-213ENST00000496037 TRAV12-3A0A0B4J271 114 aa6.2□□□□□ -1.42
SMARCAL1-213ENST00000496037 SPINK4O60575 86 aa6.2□□□□□ -1.42
SMARCAL1-213ENST00000496037 OR5G3P0C626 314 aa6.2□□□□□ -1.42
SMARCAL1-213ENST00000496037 FHL2Q14192 279 aa6.2□□□□□ -1.42
SMARCAL1-213ENST00000496037 BATFQ16520 125 aa6.2□□□□□ -1.42
SMARCAL1-213ENST00000496037 CIB3Q96Q77 187 aaPredicted RBP6.2□□□□□ -1.42
SMARCAL1-213ENST00000496037 MRPL32Q9BYC8 188 aaKnown RBP6.2□□□□□ -1.42
SMARCAL1-213ENST00000496037 TIMM9Q9Y5J7 89 aa6.2□□□□□ -1.42
SMARCAL1-213ENST00000496037 PXMP4Q9Y6I8 212 aa6.2□□□□□ -1.42
SMARCAL1-213ENST00000496037 TRAV8-3A0A0A6YYJ7 113 aa6.19□□□□□ -1.42
SMARCAL1-213ENST00000496037 CCL25O15444 150 aa6.19□□□□□ -1.42
SMARCAL1-213ENST00000496037 SLC25A6P12236 298 aa6.19□□□□□ -1.42
SMARCAL1-213ENST00000496037 RPL19P84098 196 aaKnown RBP6.19□□□□□ -1.42
SMARCAL1-213ENST00000496037 MEF2BQ02080 365 aaPredicted RBP6.19□□□□□ -1.42
SMARCAL1-213ENST00000496037 OR10J3Q5JRS4 329 aa6.19□□□□□ -1.42
SMARCAL1-213ENST00000496037 SH2D6Q7Z4S9 175 aa6.19□□□□□ -1.42
SMARCAL1-213ENST00000496037 C11orf72Q8NBR9 251 aa6.19□□□□□ -1.42
SMARCAL1-213ENST00000496037 OR10G8Q8NGN5 311 aa6.19□□□□□ -1.42
SMARCAL1-213ENST00000496037 ATP6V0E2Q8NHE4 81 aa6.19□□□□□ -1.42
SMARCAL1-213ENST00000496037 RPUSD4Q96CM3 377 aaKnown RBP6.19□□□□□ -1.42
SMARCAL1-213ENST00000496037 SMIM12Q96EX1 92 aa6.19□□□□□ -1.42
SMARCAL1-213ENST00000496037 TMEM222Q9H0R3 208 aa6.19□□□□□ -1.42
SMARCAL1-213ENST00000496037 COX11Q9Y6N1 276 aa6.19□□□□□ -1.42
SMARCAL1-213ENST00000496037 IGKV1D-37A0A075B6S9 117 aa6.18□□□□□ -1.42
SMARCAL1-213ENST00000496037 C3orf85A0A1B0GTC6 90 aa6.18□□□□□ -1.42
SMARCAL1-213ENST00000496037 SSSCA1O60232 199 aa6.18□□□□□ -1.42
SMARCAL1-213ENST00000496037 TCL1AP56279 114 aa6.18□□□□□ -1.42
SMARCAL1-213ENST00000496037 SP6Q3SY56 376 aa6.18□□□□□ -1.42
SMARCAL1-213ENST00000496037 MRPL16Q9NX20 251 aaKnown RBP6.18□□□□□ -1.42
SMARCAL1-213ENST00000496037 LAMTOR2Q9Y2Q5 125 aa6.18□□□□□ -1.42
SMARCAL1-213ENST00000496037 KLF12Q9Y4X4 402 aa6.18□□□□□ -1.42
SMARCAL1-213ENST00000496037 IGLV5-39A0A0G2JS06 123 aa6.17□□□□□ -1.42
SMARCAL1-213ENST00000496037 A0A0J9YXV3 536 aa6.17□□□□□ -1.42
SMARCAL1-213ENST00000496037 HBG1P69891 147 aa6.17□□□□□ -1.42
SMARCAL1-213ENST00000496037 HBG2P69892 147 aa6.17□□□□□ -1.42
SMARCAL1-213ENST00000496037 Q0VG73 95 aa6.17□□□□□ -1.42
SMARCAL1-213ENST00000496037 NMSQ5H8A3 153 aa6.17□□□□□ -1.42
SMARCAL1-213ENST00000496037 LINC00242Q5T6M2 205 aa6.17□□□□□ -1.42
SMARCAL1-213ENST00000496037 C10orf25Q5T742 122 aa6.17□□□□□ -1.42
SMARCAL1-213ENST00000496037 LCN15Q6UWW0 184 aa6.17□□□□□ -1.42
SMARCAL1-213ENST00000496037 VPS25Q9BRG1 176 aa6.17□□□□□ -1.42
SMARCAL1-213ENST00000496037 TMEM147Q9BVK8 224 aa6.17□□□□□ -1.42
SMARCAL1-213ENST00000496037 PARLQ9H300 379 aa6.17□□□□□ -1.42
SMARCAL1-213ENST00000496037 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.17□□□□□ -1.42
SMARCAL1-213ENST00000496037 A0A0G2JRQ6 117 aa6.16□□□□□ -1.42
SMARCAL1-213ENST00000496037 CTXND1A0A1B0GTU2 59 aa6.16□□□□□ -1.42
SMARCAL1-213ENST00000496037 CST7O76096 145 aa6.16□□□□□ -1.42
SMARCAL1-213ENST00000496037 IGLC2P0DOY2 106 aa6.16□□□□□ -1.42
SMARCAL1-213ENST00000496037 IGLC3P0DOY3 106 aa6.16□□□□□ -1.42
SMARCAL1-213ENST00000496037 RPL7P18124 248 aaKnown RBP6.16□□□□□ -1.42
SMARCAL1-213ENST00000496037 ORM2P19652 201 aa6.16□□□□□ -1.42
SMARCAL1-213ENST00000496037 CTRLP40313 264 aa6.16□□□□□ -1.42
SMARCAL1-213ENST00000496037 SPATA45Q537H7 98 aa6.16□□□□□ -1.42
SMARCAL1-213ENST00000496037 Q6ZN92 141 aa6.16□□□□□ -1.42
SMARCAL1-213ENST00000496037 STPG4Q8N801 248 aa6.16□□□□□ -1.42
SMARCAL1-213ENST00000496037 TRGV9Q99603 122 aa6.16□□□□□ -1.42
SMARCAL1-213ENST00000496037 SLC39A9Q9NUM3 307 aa6.16□□□□□ -1.42
SMARCAL1-213ENST00000496037 Q9UF83 564 aa6.16□□□□□ -1.42
SMARCAL1-213ENST00000496037 LOC100131303A0A0U1RQF7 123 aa6.15□□□□□ -1.42
SMARCAL1-213ENST00000496037 A6NDN8 102 aa6.15□□□□□ -1.42
SMARCAL1-213ENST00000496037 SMKR1H3BMG3 65 aa6.15□□□□□ -1.42
SMARCAL1-213ENST00000496037 K7ERU9 68 aa6.15□□□□□ -1.42
SMARCAL1-213ENST00000496037 CRISP2P16562 243 aa6.15□□□□□ -1.42
SMARCAL1-213ENST00000496037 ZNF726P1Q15940 193 aa6.15□□□□□ -1.42
SMARCAL1-213ENST00000496037 PMCHL1Q16048 86 aa6.15□□□□□ -1.42
SMARCAL1-213ENST00000496037 RMI2Q96E14 147 aa6.15□□□□□ -1.42
SMARCAL1-213ENST00000496037 SAMD10Q9BYL1 202 aa6.15□□□□□ -1.42
SMARCAL1-213ENST00000496037 TRAV8-1A0A0A6YYK1 113 aa6.14□□□□□ -1.43
SMARCAL1-213ENST00000496037 PDE6DO43924 150 aa6.14□□□□□ -1.43
SMARCAL1-213ENST00000496037 ZNF253O75346 499 aa6.14□□□□□ -1.43
SMARCAL1-213ENST00000496037 HYPMO75409 117 aa6.14□□□□□ -1.43
SMARCAL1-213ENST00000496037 CD164Q04900 197 aa6.14□□□□□ -1.43
SMARCAL1-213ENST00000496037 OCIAD2Q56VL3 154 aa6.14□□□□□ -1.43
SMARCAL1-213ENST00000496037 IBA57Q5T440 356 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms