RNA–Protein interactions for RNA: ENST00000495940.2

TFE3-205, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-205ENST00000495940 RNASE3P12724 160 aaKnown RBP9.9□□□□□ -0.82
TFE3-205ENST00000495940 FXYD7P58549 80 aa9.9□□□□□ -0.82
TFE3-205ENST00000495940 RBX1P62877 108 aa9.9□□□□□ -0.82
TFE3-205ENST00000495940 RHOHQ15669 191 aa9.9□□□□□ -0.82
TFE3-205ENST00000495940 C2orf66Q6UXQ4 117 aa9.9□□□□□ -0.82
TFE3-205ENST00000495940 DCANP1Q8TF63 244 aa9.9□□□□□ -0.82
TFE3-205ENST00000495940 E9PLD3 99 aa9.89□□□□□ -0.83
TFE3-205ENST00000495940 GAS8-AS1O95177 125 aa9.89□□□□□ -0.83
TFE3-205ENST00000495940 Q6ZVH6 145 aa9.89□□□□□ -0.83
TFE3-205ENST00000495940 C14orf178Q8N769 122 aaPredicted RBP9.89□□□□□ -0.83
TFE3-205ENST00000495940 KIF25-AS1Q9Y6Z4 181 aa9.89□□□□□ -0.83
TFE3-205ENST00000495940 DNAH11Q96DT5 4516 aa9.89□□□□□ -0.83
TFE3-205ENST00000495940 TRGV11A0A075B6L2 103 aa9.88□□□□□ -0.83
TFE3-205ENST00000495940 MYMXA0A1B0GTQ4 84 aa9.88□□□□□ -0.83
TFE3-205ENST00000495940 H3BUT2 72 aa9.88□□□□□ -0.83
TFE3-205ENST00000495940 CD7P09564 240 aa9.88□□□□□ -0.83
TFE3-205ENST00000495940 PRB4P10163 310 aaPredicted RBP9.88□□□□□ -0.83
TFE3-205ENST00000495940 GCSHP23434 173 aa9.88□□□□□ -0.83
TFE3-205ENST00000495940 POLR2KP53803 58 aaKnown RBP9.88□□□□□ -0.83
TFE3-205ENST00000495940 RNASE8Q8TDE3 154 aaKnown RBP9.88□□□□□ -0.83
TFE3-205ENST00000495940 C9orf85Q96MD7 179 aa9.88□□□□□ -0.83
TFE3-205ENST00000495940 IGKV2D-26A0A0A0MRZ7 120 aa9.87□□□□□ -0.83
TFE3-205ENST00000495940 TRAV26-2A0A0B4J265 109 aa9.87□□□□□ -0.83
TFE3-205ENST00000495940 A0A0J9YWU9 116 aa9.87□□□□□ -0.83
TFE3-205ENST00000495940 TRBV27A0A0K0K1C4 114 aa9.87□□□□□ -0.83
TFE3-205ENST00000495940 A0A1B0GWB2 263 aa9.87□□□□□ -0.83
TFE3-205ENST00000495940 K7EQG2 157 aa9.87□□□□□ -0.83
TFE3-205ENST00000495940 MGPP08493 103 aa9.87□□□□□ -0.83
TFE3-205ENST00000495940 SYNJ2BPP57105 145 aa9.87□□□□□ -0.83
TFE3-205ENST00000495940 FOXI2Q6ZQN5 318 aa9.87□□□□□ -0.83
TFE3-205ENST00000495940 WFDC3Q8IUB2 231 aa9.87□□□□□ -0.83
TFE3-205ENST00000495940 PTH2Q96A98 100 aa9.87□□□□□ -0.83
TFE3-205ENST00000495940 OVOL2Q9BRP0 275 aa9.87□□□□□ -0.83
TFE3-205ENST00000495940 CSTL1Q9H114 145 aa9.87□□□□□ -0.83
TFE3-205ENST00000495940 TP73-AS1Q9UF72 201 aa9.87□□□□□ -0.83
TFE3-205ENST00000495940 SPCS1Q9Y6A9 102 aa9.87□□□□□ -0.83
TFE3-205ENST00000495940 A0A0J9YX75 114 aa9.86□□□□□ -0.83
TFE3-205ENST00000495940 CRYBA4P53673 196 aa9.86□□□□□ -0.83
TFE3-205ENST00000495940 LINC00315P59091 139 aa9.86□□□□□ -0.83
TFE3-205ENST00000495940 PMVKQ15126 192 aa9.86□□□□□ -0.83
TFE3-205ENST00000495940 LYRM7Q5U5X0 104 aa9.86□□□□□ -0.83
TFE3-205ENST00000495940 TRPT1Q86TN4 253 aaKnown RBP9.86□□□□□ -0.83
TFE3-205ENST00000495940 BAALCQ8WXS3 180 aa9.86□□□□□ -0.83
TFE3-205ENST00000495940 KLK5Q9Y337 293 aaPredicted RBP9.86□□□□□ -0.83
TFE3-205ENST00000495940 DNAH17Q9UFH2 4485 aa9.86□□□□□ -0.83
TFE3-205ENST00000495940 A0A1B0GVY2 172 aa9.85□□□□□ -0.83
TFE3-205ENST00000495940 HIST1H4GQ99525 98 aa9.85□□□□□ -0.83
TFE3-205ENST00000495940 HSPG2P98160 4391 aa9.85□□□□□ -0.83
TFE3-205ENST00000495940 IGHV1OR15-1A0A075B7D0 117 aa9.84□□□□□ -0.83
TFE3-205ENST00000495940 IGHV3-16A0A0C4DH30 117 aa9.84□□□□□ -0.83
TFE3-205ENST00000495940 PRSS29PA6NIE9 313 aa9.84□□□□□ -0.83
TFE3-205ENST00000495940 F8W1H4 67 aa9.84□□□□□ -0.83
TFE3-205ENST00000495940 J3QR89 54 aa9.84□□□□□ -0.83
TFE3-205ENST00000495940 GNRH2O43555 120 aa9.84□□□□□ -0.83
TFE3-205ENST00000495940 NEGR1Q7Z3B1 354 aa9.84□□□□□ -0.83
TFE3-205ENST00000495940 PHLDA1Q8WV24 401 aaPredicted RBP9.84□□□□□ -0.83
TFE3-205ENST00000495940 IGIPA6NJ69 53 aa9.83□□□□□ -0.84
TFE3-205ENST00000495940 C11orf86A6NJI1 115 aa9.83□□□□□ -0.84
TFE3-205ENST00000495940 A8MTW9 85 aa9.83□□□□□ -0.84
TFE3-205ENST00000495940 ZFP2Q6ZN57 461 aa9.83□□□□□ -0.84
TFE3-205ENST00000495940 PKD1P98161 4303 aa9.83□□□□□ -0.84
TFE3-205ENST00000495940 HERC1Q15751 4861 aa9.82□□□□□ -0.84
TFE3-205ENST00000495940 TRBV7-3A0A075B6L6 115 aa9.82□□□□□ -0.84
TFE3-205ENST00000495940 FXYD2P54710 66 aa9.82□□□□□ -0.84
TFE3-205ENST00000495940 SUMO4Q6EEV6 95 aa9.82□□□□□ -0.84
TFE3-205ENST00000495940 RPL39LQ96EH5 51 aaKnown RBP9.82□□□□□ -0.84
TFE3-205ENST00000495940 LINC00467Q9BRT7 94 aa9.82□□□□□ -0.84
TFE3-205ENST00000495940 SPANXB1Q9NS25 103 aaPredicted RBP9.82□□□□□ -0.84
TFE3-205ENST00000495940 J3KRW8 73 aa9.81□□□□□ -0.84
TFE3-205ENST00000495940 PCP4P48539 62 aa9.81□□□□□ -0.84
TFE3-205ENST00000495940 C12orf74Q32Q52 190 aa9.81□□□□□ -0.84
TFE3-205ENST00000495940 CD300EQ496F6 205 aaPredicted RBP9.81□□□□□ -0.84
TFE3-205ENST00000495940 CLUHP3Q96NS8 147 aa9.81□□□□□ -0.84
TFE3-205ENST00000495940 VPS25Q9BRG1 176 aa9.81□□□□□ -0.84
TFE3-205ENST00000495940 PEMTQ9UBM1 199 aa9.81□□□□□ -0.84
TFE3-205ENST00000495940 SDHAF1A6NFY7 115 aa9.8□□□□□ -0.84
TFE3-205ENST00000495940 IGLL5B9A064 214 aa9.8□□□□□ -0.84
TFE3-205ENST00000495940 F5H697 171 aa9.8□□□□□ -0.84
TFE3-205ENST00000495940 F6UB75 175 aa9.8□□□□□ -0.84
TFE3-205ENST00000495940 EDN2P20800 178 aa9.8□□□□□ -0.84
TFE3-205ENST00000495940 NFE4Q86UQ8 179 aa9.8□□□□□ -0.84
TFE3-205ENST00000495940 MAPKAPK5-AS1Q8N8E1 139 aa9.8□□□□□ -0.84
TFE3-205ENST00000495940 RAB37Q96AX2 223 aa9.8□□□□□ -0.84
TFE3-205ENST00000495940 ZNF479Q96JC4 524 aa9.8□□□□□ -0.84
TFE3-205ENST00000495940 PRADC1Q9BSG0 188 aa9.8□□□□□ -0.84
TFE3-205ENST00000495940 NHP2Q9NX24 153 aaKnown RBP9.8□□□□□ -0.84
TFE3-205ENST00000495940 SELENOKQ9Y6D0 94 aa9.8□□□□□ -0.84
TFE3-205ENST00000495940 TRAV12-3A0A0B4J271 114 aa9.79□□□□□ -0.84
TFE3-205ENST00000495940 I3L3M4 83 aa9.79□□□□□ -0.84
TFE3-205ENST00000495940 RRN3P1Q2M238 152 aa9.79□□□□□ -0.84
TFE3-205ENST00000495940 ZNF876PQ49A33 203 aa9.79□□□□□ -0.84
TFE3-205ENST00000495940 Q6ZQT7 251 aa9.79□□□□□ -0.84
TFE3-205ENST00000495940 TP53TG1Q9Y2A0 90 aa9.79□□□□□ -0.84
TFE3-205ENST00000495940 PYGO1Q9Y3Y4 419 aa9.79□□□□□ -0.84
TFE3-205ENST00000495940 ZNF815PA8K554 130 aa9.78□□□□□ -0.84
TFE3-205ENST00000495940 A8MWV9 139 aa9.78□□□□□ -0.84
TFE3-205ENST00000495940 M0QY20 66 aa9.78□□□□□ -0.84
TFE3-205ENST00000495940 SPAG8Q99932 426 aaPredicted RBP9.78□□□□□ -0.84
TFE3-205ENST00000495940 MDFICQ9P1T7 246 aa9.78□□□□□ -0.84
TFE3-205ENST00000495940 RHODO00212 210 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 336.8 ms