RNA–Protein interactions for RNA: ENST00000495471.1

CCNL1-225, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-225ENST00000495471 NPFFO15130 113 aa-0.44□□□□□ -2.48
CCNL1-225ENST00000495471 PIN1P1O15428 100 aa-0.44□□□□□ -2.48
CCNL1-225ENST00000495471 TFF1P04155 84 aa-0.44□□□□□ -2.48
CCNL1-225ENST00000495471 INSL4Q14641 139 aa-0.44□□□□□ -2.48
CCNL1-225ENST00000495471 Q5VSD8 79 aa-0.44□□□□□ -2.48
CCNL1-225ENST00000495471 NDUFA11Q86Y39 141 aa-0.44□□□□□ -2.48
CCNL1-225ENST00000495471 TMEM35BQ8NCS4 154 aa-0.44□□□□□ -2.48
CCNL1-225ENST00000495471 SPCS1Q9Y6A9 102 aa-0.44□□□□□ -2.48
CCNL1-225ENST00000495471 KIAA0100Q14667 2235 aaKnown RBP-0.44□□□□□ -2.48
CCNL1-225ENST00000495471 CCDC171Q6TFL3 1326 aa-0.44□□□□□ -2.48
CCNL1-225ENST00000495471 FAM186AA6NE01 2351 aa-0.45□□□□□ -2.48
CCNL1-225ENST00000495471 NHSL1Q5SYE7 1610 aa-0.45□□□□□ -2.48
CCNL1-225ENST00000495471 DMDP11532 3685 aa-0.45□□□□□ -2.48
CCNL1-225ENST00000495471 DNAH12Q6ZR08 3092 aa-0.45□□□□□ -2.48
CCNL1-225ENST00000495471 BORCS7-ASMTA0A0B4J1R7 106 aa-0.45□□□□□ -2.48
CCNL1-225ENST00000495471 TFAMQ00059 246 aaKnown RBP-0.45□□□□□ -2.48
CCNL1-225ENST00000495471 CALML5Q9NZT1 146 aa-0.45□□□□□ -2.48
CCNL1-225ENST00000495471 V9GYQ6 96 aa-0.45□□□□□ -2.48
CCNL1-225ENST00000495471 MKI67P46013 3256 aaKnown RBP-0.45□□□□□ -2.48
CCNL1-225ENST00000495471 CEP290O15078 2479 aa-0.45□□□□□ -2.48
CCNL1-225ENST00000495471 AKAP9Q99996 3911 aa-0.45□□□□□ -2.48
CCNL1-225ENST00000495471 BIVM-ERCC5R4GMW8 1640 aa-0.46□□□□□ -2.48
CCNL1-225ENST00000495471 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.46□□□□□ -2.485e-12■■■■■ 42.3
CCNL1-225ENST00000495471 OVOS2A0A0G2JMS6 1433 aa-0.46□□□□□ -2.48
CCNL1-225ENST00000495471 PPRC1Q5VV67 1664 aaKnown RBP-0.46□□□□□ -2.48
CCNL1-225ENST00000495471 A0A087WTM6 91 aa-0.46□□□□□ -2.48
CCNL1-225ENST00000495471 LOC730098B7Z3J9 87 aa-0.46□□□□□ -2.48
CCNL1-225ENST00000495471 YPEL1O60688 119 aa-0.46□□□□□ -2.48
CCNL1-225ENST00000495471 SPRR1AP35321 89 aa-0.46□□□□□ -2.48
CCNL1-225ENST00000495471 OR2T2Q6IF00 324 aa-0.46□□□□□ -2.48
CCNL1-225ENST00000495471 COX7B2Q8TF08 81 aa-0.46□□□□□ -2.48
CCNL1-225ENST00000495471 MYO7BQ6PIF6 2116 aa-0.46□□□□□ -2.48
CCNL1-225ENST00000495471 CDH23Q9H251 3354 aa-0.46□□□□□ -2.48
CCNL1-225ENST00000495471 DNAH5Q8TE73 4624 aa-0.47□□□□□ -2.48
CCNL1-225ENST00000495471 RANBP2P49792 3224 aaKnown RBP-0.47□□□□□ -2.48
CCNL1-225ENST00000495471 SPG11Q96JI7 2443 aa-0.47□□□□□ -2.48
CCNL1-225ENST00000495471 USF3Q68DE3 2245 aa-0.47□□□□□ -2.48
CCNL1-225ENST00000495471 TRBV10-3A0A0K0K1G6 114 aa-0.47□□□□□ -2.48
CCNL1-225ENST00000495471 A0A1B0GW64 132 aa-0.47□□□□□ -2.48
CCNL1-225ENST00000495471 CCDC179H3BU77 68 aa-0.47□□□□□ -2.48
CCNL1-225ENST00000495471 SMIM24O75264 130 aa-0.47□□□□□ -2.48
CCNL1-225ENST00000495471 DPM2O94777 84 aa-0.47□□□□□ -2.48
CCNL1-225ENST00000495471 RBP4P02753 201 aa-0.47□□□□□ -2.48
CCNL1-225ENST00000495471 FABP1P07148 127 aa-0.47□□□□□ -2.48
CCNL1-225ENST00000495471 DCDP81605 110 aaKnown RBP-0.47□□□□□ -2.48
CCNL1-225ENST00000495471 TMEM91Q6ZNR0 172 aa-0.47□□□□□ -2.48
CCNL1-225ENST00000495471 C20orf197Q8N268 126 aa-0.47□□□□□ -2.48
CCNL1-225ENST00000495471 DYNLRB2Q8TF09 96 aa-0.47□□□□□ -2.48
CCNL1-225ENST00000495471 PCNTO95613 3336 aa-0.47□□□□□ -2.48
CCNL1-225ENST00000495471 SZT2Q5T011 3432 aa-0.47□□□□□ -2.49
CCNL1-225ENST00000495471 PHIPQ8WWQ0 1821 aa-0.48□□□□□ -2.49
CCNL1-225ENST00000495471 CNOT1A5YKK6 2376 aaKnown RBP-0.48□□□□□ -2.49
CCNL1-225ENST00000495471 DNAH9Q9NYC9 4486 aa-0.48□□□□□ -2.49
CCNL1-225ENST00000495471 MUC3AQ02505 3323 aa-0.48□□□□□ -2.49
CCNL1-225ENST00000495471 TRGV1A0A0A0MS02 117 aa-0.48□□□□□ -2.49
CCNL1-225ENST00000495471 A6NIN4 97 aa-0.48□□□□□ -2.49
CCNL1-225ENST00000495471 CCL3L1P16619 93 aa-0.48□□□□□ -2.49
CCNL1-225ENST00000495471 S100GP29377 79 aa-0.48□□□□□ -2.49
CCNL1-225ENST00000495471 OR8I2Q8N0Y5 310 aa-0.48□□□□□ -2.49
CCNL1-225ENST00000495471 IFI27L1Q96BM0 104 aa-0.48□□□□□ -2.49
CCNL1-225ENST00000495471 Q96NJ1 140 aa-0.48□□□□□ -2.49
CCNL1-225ENST00000495471 NPVFQ9HCQ7 196 aa-0.48□□□□□ -2.49
CCNL1-225ENST00000495471 CFAP47Q6ZTR5 3102 aa-0.48□□□□□ -2.49
CCNL1-225ENST00000495471 PLXNB2O15031 1838 aa-0.48□□□□□ -2.49
CCNL1-225ENST00000495471 PARP14Q460N5 1801 aa-0.48□□□□□ -2.49
CCNL1-225ENST00000495471 ARFGEF1Q9Y6D6 1849 aa-0.48□□□□□ -2.49
CCNL1-225ENST00000495471 SPTA1P02549 2419 aa-0.48□□□□□ -2.49
CCNL1-225ENST00000495471 UHRF1BP1LA0JNW5 1464 aa-0.48□□□□□ -2.49
CCNL1-225ENST00000495471 DNAH8Q96JB1 4490 aa-0.48□□□□□ -2.49
CCNL1-225ENST00000495471 SPTBN5Q9NRC6 3674 aaKnown RBP-0.49□□□□□ -2.49
CCNL1-225ENST00000495471 FAM92AA1XBS5 289 aa-0.49□□□□□ -2.49
CCNL1-225ENST00000495471 J3KT08 172 aa-0.49□□□□□ -2.49
CCNL1-225ENST00000495471 M0R2P5 195 aa-0.49□□□□□ -2.49
CCNL1-225ENST00000495471 PAEPP09466 180 aa-0.49□□□□□ -2.49
CCNL1-225ENST00000495471 SLC25A6P12236 298 aa-0.49□□□□□ -2.49
CCNL1-225ENST00000495471 SPCS2Q15005 226 aa-0.49□□□□□ -2.49
CCNL1-225ENST00000495471 KRTAP6-2Q3LI66 62 aa-0.49□□□□□ -2.49
CCNL1-225ENST00000495471 RPL7L1Q6DKI1 246 aaKnown RBP-0.49□□□□□ -2.49
CCNL1-225ENST00000495471 SNX29P2Q8IUI4 249 aa-0.49□□□□□ -2.49
CCNL1-225ENST00000495471 SPRR2FQ96RM1 72 aa-0.49□□□□□ -2.49
CCNL1-225ENST00000495471 DDA1Q9BW61 102 aa-0.49□□□□□ -2.49
CCNL1-225ENST00000495471 NOP16Q9Y3C1 178 aaKnown RBP-0.49□□□□□ -2.49
CCNL1-225ENST00000495471 DNAJC15Q9Y5T4 150 aa-0.49□□□□□ -2.49
CCNL1-225ENST00000495471 PTPRMP28827 1452 aa-0.49□□□□□ -2.49
CCNL1-225ENST00000495471 DNAH17Q9UFH2 4485 aa-0.49□□□□□ -2.49
CCNL1-225ENST00000495471 USP34Q70CQ2 3546 aa-0.5□□□□□ -2.49
CCNL1-225ENST00000495471 FXYD6-FXYD2A0A087WZ82 144 aa-0.5□□□□□ -2.49
CCNL1-225ENST00000495471 MT1BP07438 61 aa-0.5□□□□□ -2.49
CCNL1-225ENST00000495471 MT1HL1P0DM35 61 aa-0.5□□□□□ -2.49
CCNL1-225ENST00000495471 RPS28P62857 69 aaKnown RBP-0.5□□□□□ -2.49
CCNL1-225ENST00000495471 RBM3P98179 157 aaKnown RBP-0.5□□□□□ -2.49
CCNL1-225ENST00000495471 ATP6V0E2Q8NHE4 81 aa-0.5□□□□□ -2.49
CCNL1-225ENST00000495471 SKA2Q8WVK7 121 aaPredicted RBP-0.5□□□□□ -2.49
CCNL1-225ENST00000495471 MAGOHBQ96A72 148 aaKnown RBP-0.5□□□□□ -2.49
CCNL1-225ENST00000495471 LINC00846Q9NV44 126 aa-0.5□□□□□ -2.49
CCNL1-225ENST00000495471 GOLGA4Q13439 2230 aaKnown RBP-0.5□□□□□ -2.49
CCNL1-225ENST00000495471 G3V318 75 aa-0.51□□□□□ -2.49
CCNL1-225ENST00000495471 K7EQZ3 153 aa-0.51□□□□□ -2.49
CCNL1-225ENST00000495471 SIPA1L3O60292 1781 aaPredicted RBP-0.51□□□□□ -2.49
CCNL1-225ENST00000495471 MT-ND4LP03901 98 aa-0.51□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms