RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 C20orf203Q8NBC4 194 aa10.17□□□□□ -0.78
LIMS2-216ENST00000494613 SMIM7Q9BQ49 75 aa10.17□□□□□ -0.78
LIMS2-216ENST00000494613 USP17L23D6RBM5 183 aa10.16□□□□□ -0.78
LIMS2-216ENST00000494613 REG3AQ06141 175 aa10.16□□□□□ -0.78
LIMS2-216ENST00000494613 COTL1Q14019 142 aa10.16□□□□□ -0.78
LIMS2-216ENST00000494613 LINC01551Q86U37 167 aa10.16□□□□□ -0.78
LIMS2-216ENST00000494613 ZNF727A8MUV8 499 aa10.15□□□□□ -0.78
LIMS2-216ENST00000494613 HLA-DQA1P01909 254 aa10.15□□□□□ -0.78
LIMS2-216ENST00000494613 PRSS1P07477 247 aa10.15□□□□□ -0.78
LIMS2-216ENST00000494613 RPL39LQ96EH5 51 aaKnown RBP10.15□□□□□ -0.78
LIMS2-216ENST00000494613 FAT1Q14517 4588 aa10.15□□□□□ -0.78
LIMS2-216ENST00000494613 IGLV10-54A0A075B6I4 117 aa10.14□□□□□ -0.79
LIMS2-216ENST00000494613 AMTP48728 403 aa10.14□□□□□ -0.79
LIMS2-216ENST00000494613 CT83Q5H943 113 aa10.14□□□□□ -0.79
LIMS2-216ENST00000494613 TEX261Q6UWH6 196 aa10.14□□□□□ -0.79
LIMS2-216ENST00000494613 GFRA4Q9GZZ7 299 aa10.14□□□□□ -0.79
LIMS2-216ENST00000494613 TRAV8-4A0A0B4J246 113 aa10.13□□□□□ -0.79
LIMS2-216ENST00000494613 UBE2L6O14933 153 aa10.13□□□□□ -0.79
LIMS2-216ENST00000494613 DGAT2L7PQ6IED9 249 aa10.13□□□□□ -0.79
LIMS2-216ENST00000494613 TSKUQ8WUA8 353 aa10.13□□□□□ -0.79
LIMS2-216ENST00000494613 CHAC1Q9BUX1 264 aa10.13□□□□□ -0.79
LIMS2-216ENST00000494613 OSTCQ9NRP0 149 aa10.13□□□□□ -0.79
LIMS2-216ENST00000494613 TMEM241Q24JQ0 296 aa10.12□□□□□ -0.79
LIMS2-216ENST00000494613 A0A1B0GUT8 65 aa10.11□□□□□ -0.79
LIMS2-216ENST00000494613 FAM231BA6NCW3 169 aa10.11□□□□□ -0.79
LIMS2-216ENST00000494613 HIGD1CA8MV81 97 aa10.11□□□□□ -0.79
LIMS2-216ENST00000494613 GAS8-AS1O95177 125 aa10.11□□□□□ -0.79
LIMS2-216ENST00000494613 SCXQ7RTU7 201 aa10.11□□□□□ -0.79
LIMS2-216ENST00000494613 BORCS7Q96B45 105 aa10.11□□□□□ -0.79
LIMS2-216ENST00000494613 SDHAF1A6NFY7 115 aa10.1□□□□□ -0.79
LIMS2-216ENST00000494613 C9JQL5 133 aa10.1□□□□□ -0.79
LIMS2-216ENST00000494613 NCR2O95944 276 aa10.1□□□□□ -0.79
LIMS2-216ENST00000494613 C9orf163Q8N9P6 203 aa10.1□□□□□ -0.79
LIMS2-216ENST00000494613 CLRN3Q8NCR9 226 aa10.1□□□□□ -0.79
LIMS2-216ENST00000494613 CIRBP-AS1Q8TBR5 109 aa10.1□□□□□ -0.79
LIMS2-216ENST00000494613 VPS13BQ7Z7G8 4022 aa10.1□□□□□ -0.79
LIMS2-216ENST00000494613 DNAH8Q96JB1 4490 aa10.09□□□□□ -0.79
LIMS2-216ENST00000494613 PLA2G1BP04054 148 aaKnown RBP10.09□□□□□ -0.79
LIMS2-216ENST00000494613 RAB4AP20338 218 aa10.09□□□□□ -0.79
LIMS2-216ENST00000494613 PMCHP20382 165 aa10.09□□□□□ -0.79
LIMS2-216ENST00000494613 FAM74A3Q4VXF1 159 aa10.09□□□□□ -0.79
LIMS2-216ENST00000494613 LINC00528Q8N1L1 170 aa10.09□□□□□ -0.79
LIMS2-216ENST00000494613 TMEM191AQ9H0A3 160 aa10.09□□□□□ -0.79
LIMS2-216ENST00000494613 V9GYV3 84 aa10.09□□□□□ -0.79
LIMS2-216ENST00000494613 TRBV6-5A0A0K0K1A5 114 aa10.08□□□□□ -0.8
LIMS2-216ENST00000494613 I3L3M4 83 aa10.08□□□□□ -0.8
LIMS2-216ENST00000494613 SRSF3P84103 164 aaKnown RBP10.08□□□□□ -0.8
LIMS2-216ENST00000494613 ISOC2Q96AB3 205 aa10.08□□□□□ -0.8
LIMS2-216ENST00000494613 RNF185Q96GF1 192 aa10.08□□□□□ -0.8
LIMS2-216ENST00000494613 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.07□□□□□ -0.8
LIMS2-216ENST00000494613 IGKV2-29A2NJV5 120 aaPredicted RBP10.07□□□□□ -0.8
LIMS2-216ENST00000494613 H7C423 109 aa10.07□□□□□ -0.8
LIMS2-216ENST00000494613 RPL23P62829 140 aaKnown RBP10.07□□□□□ -0.8
LIMS2-216ENST00000494613 PEA15Q15121 130 aa10.07□□□□□ -0.8
LIMS2-216ENST00000494613 AMMECR1LQ6DCA0 310 aa10.07□□□□□ -0.8
LIMS2-216ENST00000494613 SDIM1Q6ZPB5 146 aa10.07□□□□□ -0.8
LIMS2-216ENST00000494613 NUP35Q8NFH5 326 aa10.07□□□□□ -0.8
LIMS2-216ENST00000494613 ST20Q9HBF5 79 aa10.07□□□□□ -0.8
LIMS2-216ENST00000494613 IGKV3OR2-268A0A0C4DH90 116 aa10.06□□□□□ -0.8
LIMS2-216ENST00000494613 POLR2KP53803 58 aaKnown RBP10.06□□□□□ -0.8
LIMS2-216ENST00000494613 RIGQ13278 110 aa10.06□□□□□ -0.8
LIMS2-216ENST00000494613 RNASEKQ6P5S7 137 aaKnown RBP10.06□□□□□ -0.8
LIMS2-216ENST00000494613 hDV102S1A0JD36 115 aa10.05□□□□□ -0.8
LIMS2-216ENST00000494613 GAGE12HA6NDE8 117 aa10.05□□□□□ -0.8
LIMS2-216ENST00000494613 APCSP02743 223 aa10.05□□□□□ -0.8
LIMS2-216ENST00000494613 SLPIP03973 132 aa10.05□□□□□ -0.8
LIMS2-216ENST00000494613 FGF6P10767 208 aa10.05□□□□□ -0.8
LIMS2-216ENST00000494613 AMN1Q8IY45 258 aa10.05□□□□□ -0.8
LIMS2-216ENST00000494613 FLG2Q5D862 2391 aaPredicted RBP10.04□□□□□ -0.8
LIMS2-216ENST00000494613 TSHBP01222 138 aa10.04□□□□□ -0.8
LIMS2-216ENST00000494613 ESDP10768 282 aa10.04□□□□□ -0.8
LIMS2-216ENST00000494613 RPS10P46783 165 aaKnown RBP10.04□□□□□ -0.8
LIMS2-216ENST00000494613 ADIRFQ15847 76 aa10.04□□□□□ -0.8
LIMS2-216ENST00000494613 MRAP2Q96G30 205 aa10.04□□□□□ -0.8
LIMS2-216ENST00000494613 SMDT1Q9H4I9 107 aa10.04□□□□□ -0.8
LIMS2-216ENST00000494613 NAT8Q9UHE5 227 aa10.04□□□□□ -0.8
LIMS2-216ENST00000494613 CNBPP62633 177 aaKnown RBP10.03□□□□□ -0.8
LIMS2-216ENST00000494613 NAT8BQ9UHF3 227 aa10.03□□□□□ -0.8
LIMS2-216ENST00000494613 TRBV27A0A0K0K1C4 114 aa10.02□□□□□ -0.81
LIMS2-216ENST00000494613 SMIM27A0A1W2PRY6 76 aa10.02□□□□□ -0.81
LIMS2-216ENST00000494613 SMKR1H3BMG3 65 aa10.02□□□□□ -0.81
LIMS2-216ENST00000494613 CFAP161Q6P656 301 aa10.02□□□□□ -0.81
LIMS2-216ENST00000494613 CHCHD10Q8WYQ3 142 aaPredicted RBP10.02□□□□□ -0.81
LIMS2-216ENST00000494613 AP5S1Q9NUS5 200 aa10.02□□□□□ -0.81
LIMS2-216ENST00000494613 TMEM242Q9NWH2 141 aa10.02□□□□□ -0.81
LIMS2-216ENST00000494613 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.02□□□□□ -0.81
LIMS2-216ENST00000494613 PANO1I0J062 215 aa10.01□□□□□ -0.81
LIMS2-216ENST00000494613 VCYO14598 125 aa10.01□□□□□ -0.81
LIMS2-216ENST00000494613 ZNF25P17030 456 aaPredicted RBP10.01□□□□□ -0.81
LIMS2-216ENST00000494613 KRTAP10-4P60372 401 aaPredicted RBP10.01□□□□□ -0.81
LIMS2-216ENST00000494613 OR5A1Q8NGJ0 315 aa10.01□□□□□ -0.81
LIMS2-216ENST00000494613 TMEM101Q96IK0 257 aa10.01□□□□□ -0.81
LIMS2-216ENST00000494613 BTF3L4Q96K17 158 aa10.01□□□□□ -0.81
LIMS2-216ENST00000494613 FAM104BQ5XKR9 115 aa10□□□□□ -0.81
LIMS2-216ENST00000494613 C15orf56Q8N910 161 aa10□□□□□ -0.81
LIMS2-216ENST00000494613 DPH3Q96FX2 82 aa10□□□□□ -0.81
LIMS2-216ENST00000494613 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.99□□□□□ -0.81
LIMS2-216ENST00000494613 PPP1R17O96001 155 aa9.99□□□□□ -0.81
LIMS2-216ENST00000494613 MRPL51Q4U2R6 128 aaKnown RBP9.99□□□□□ -0.81
LIMS2-216ENST00000494613 NRACQ8N912 160 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms