RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 DKK2Q9UBU2 259 aa4.8□□□□□ -1.64
MSH5-217ENST00000494458 HHLA3Q9XRX5 114 aa4.8□□□□□ -1.64
MSH5-217ENST00000494458 A0A087WX48 190 aa4.79□□□□□ -1.64
MSH5-217ENST00000494458 IGHV3-73A0A0B4J1V6 119 aa4.79□□□□□ -1.64
MSH5-217ENST00000494458 G3V4G9 280 aa4.79□□□□□ -1.64
MSH5-217ENST00000494458 K7EQD1 137 aa4.79□□□□□ -1.64
MSH5-217ENST00000494458 NUDT3O95989 172 aa4.79□□□□□ -1.64
MSH5-217ENST00000494458 OR11H2Q8NH07 326 aa4.79□□□□□ -1.64
MSH5-217ENST00000494458 TMEM141Q96I45 108 aa4.79□□□□□ -1.64
MSH5-217ENST00000494458 CHCHD7Q9BUK0 85 aa4.79□□□□□ -1.64
MSH5-217ENST00000494458 GTSF1LQ9H1H1 148 aa4.79□□□□□ -1.64
MSH5-217ENST00000494458 CYSLTR1Q9Y271 337 aa4.79□□□□□ -1.64
MSH5-217ENST00000494458 NBEAL2Q6ZNJ1 2754 aa4.78□□□□□ -1.64
MSH5-217ENST00000494458 IGHV4-28A0A0C4DH34 117 aa4.78□□□□□ -1.64
MSH5-217ENST00000494458 GAGE12BA1L429 117 aa4.78□□□□□ -1.64
MSH5-217ENST00000494458 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.78□□□□□ -1.64
MSH5-217ENST00000494458 PAX4O43316 350 aa4.78□□□□□ -1.64
MSH5-217ENST00000494458 GAGE7O76087 117 aa4.78□□□□□ -1.64
MSH5-217ENST00000494458 GAGE12FP0CL80 117 aa4.78□□□□□ -1.64
MSH5-217ENST00000494458 GAGE12GP0CL81 117 aa4.78□□□□□ -1.64
MSH5-217ENST00000494458 GAGE12IP0CL82 117 aa4.78□□□□□ -1.64
MSH5-217ENST00000494458 DEFB135Q30KP9 77 aa4.78□□□□□ -1.64
MSH5-217ENST00000494458 NEGR1Q7Z3B1 354 aa4.78□□□□□ -1.64
MSH5-217ENST00000494458 DAZ4Q86SG3 579 aaKnown RBP4.78□□□□□ -1.64
MSH5-217ENST00000494458 SBSPONQ8IVN8 264 aa4.78□□□□□ -1.64
MSH5-217ENST00000494458 AMELXQ99217 191 aa4.78□□□□□ -1.64
MSH5-217ENST00000494458 TIMM21Q9BVV7 248 aa4.78□□□□□ -1.64
MSH5-217ENST00000494458 DAZ3Q9NR90 486 aaKnown RBP4.78□□□□□ -1.64
MSH5-217ENST00000494458 CSDC2Q9Y534 153 aaKnown RBP4.78□□□□□ -1.64
MSH5-217ENST00000494458 TNFRSF18Q9Y5U5 241 aa4.78□□□□□ -1.64
MSH5-217ENST00000494458 TRGV2A0A075B6R0 118 aa4.77□□□□□ -1.65
MSH5-217ENST00000494458 IGLC3P0DOY3 106 aa4.77□□□□□ -1.65
MSH5-217ENST00000494458 RPL36AP83881 106 aaKnown RBP4.77□□□□□ -1.65
MSH5-217ENST00000494458 FAM222AQ5U5X8 452 aa4.77□□□□□ -1.65
MSH5-217ENST00000494458 NTM-AS1Q6ZSK4 140 aa4.77□□□□□ -1.65
MSH5-217ENST00000494458 MRPL52Q86TS9 123 aaKnown RBP4.77□□□□□ -1.65
MSH5-217ENST00000494458 BAALCQ8WXS3 180 aa4.77□□□□□ -1.65
MSH5-217ENST00000494458 RPL36ALQ969Q0 106 aaKnown RBP4.77□□□□□ -1.65
MSH5-217ENST00000494458 SCGB3A1Q96QR1 104 aa4.77□□□□□ -1.65
MSH5-217ENST00000494458 VAMP8Q9BV40 100 aa4.77□□□□□ -1.65
MSH5-217ENST00000494458 C11orf68Q9H3H3 251 aaKnown RBP4.77□□□□□ -1.65
MSH5-217ENST00000494458 NBEAL1Q6ZS30 2694 aa4.76□□□□□ -1.65
MSH5-217ENST00000494458 TEX48A0A1B0GUV7 120 aa4.76□□□□□ -1.65
MSH5-217ENST00000494458 PRSS29PA6NIE9 313 aa4.76□□□□□ -1.65
MSH5-217ENST00000494458 F8VRH5 84 aa4.76□□□□□ -1.65
MSH5-217ENST00000494458 TSTD3H0UI37 97 aa4.76□□□□□ -1.65
MSH5-217ENST00000494458 H7C423 109 aa4.76□□□□□ -1.65
MSH5-217ENST00000494458 PRSS1P07477 247 aa4.76□□□□□ -1.65
MSH5-217ENST00000494458 RPL39P62891 51 aaKnown RBP4.76□□□□□ -1.65
MSH5-217ENST00000494458 MRPS36P82909 103 aaKnown RBP4.76□□□□□ -1.65
MSH5-217ENST00000494458 MAJINQ3KP22 176 aa4.76□□□□□ -1.65
MSH5-217ENST00000494458 KRTAP21-3Q3LHN1 58 aa4.76□□□□□ -1.65
MSH5-217ENST00000494458 FAM19A3Q7Z5A8 133 aa4.76□□□□□ -1.65
MSH5-217ENST00000494458 ZNRF2Q8NHG8 242 aa4.76□□□□□ -1.65
MSH5-217ENST00000494458 MIEN1Q9BRT3 115 aa4.76□□□□□ -1.65
MSH5-217ENST00000494458 CST9LQ9H4G1 147 aa4.76□□□□□ -1.65
MSH5-217ENST00000494458 SPANXA1Q9NS26 97 aa4.76□□□□□ -1.65
MSH5-217ENST00000494458 PRO0255Q9UI72 69 aa4.76□□□□□ -1.65
MSH5-217ENST00000494458 UBE2D4Q9Y2X8 147 aa4.76□□□□□ -1.65
MSH5-217ENST00000494458 IGLV4-69A0A075B6H9 119 aa4.75□□□□□ -1.65
MSH5-217ENST00000494458 IGLV4-3A0A075B6K6 122 aa4.75□□□□□ -1.65
MSH5-217ENST00000494458 K7EIL1 84 aa4.75□□□□□ -1.65
MSH5-217ENST00000494458 DLEU1O43261 78 aa4.75□□□□□ -1.65
MSH5-217ENST00000494458 IGKCP01834 107 aa4.75□□□□□ -1.65
MSH5-217ENST00000494458 SPART-AS1P0CW21 52 aa4.75□□□□□ -1.65
MSH5-217ENST00000494458 DDTP30046 118 aa4.75□□□□□ -1.65
MSH5-217ENST00000494458 COTL1Q14019 142 aa4.75□□□□□ -1.65
MSH5-217ENST00000494458 PMVKQ15126 192 aa4.75□□□□□ -1.65
MSH5-217ENST00000494458 SPATA45Q537H7 98 aa4.75□□□□□ -1.65
MSH5-217ENST00000494458 Q6ZN92 141 aa4.75□□□□□ -1.65
MSH5-217ENST00000494458 NFE4Q86UQ8 179 aa4.75□□□□□ -1.65
MSH5-217ENST00000494458 VSIG2Q96IQ7 327 aa4.75□□□□□ -1.65
MSH5-217ENST00000494458 TM2D3Q9BRN9 247 aa4.75□□□□□ -1.65
MSH5-217ENST00000494458 PRADC1Q9BSG0 188 aa4.75□□□□□ -1.65
MSH5-217ENST00000494458 MRPL35Q9NZE8 188 aaKnown RBP4.75□□□□□ -1.65
MSH5-217ENST00000494458 CELA1Q9UNI1 258 aa4.75□□□□□ -1.65
MSH5-217ENST00000494458 PAM16Q9Y3D7 125 aa4.75□□□□□ -1.65
MSH5-217ENST00000494458 TRAV26-1A0A087WT03 109 aa4.74□□□□□ -1.65
MSH5-217ENST00000494458 TRGV4A0A0C4DH28 118 aa4.74□□□□□ -1.65
MSH5-217ENST00000494458 hDV102S1A0JD36 115 aa4.74□□□□□ -1.65
MSH5-217ENST00000494458 LINC00587B1AMM8 73 aa4.74□□□□□ -1.65
MSH5-217ENST00000494458 H3BNG1 76 aa4.74□□□□□ -1.65
MSH5-217ENST00000494458 DPM2O94777 84 aa4.74□□□□□ -1.65
MSH5-217ENST00000494458 DEFB130BP0DP73 79 aa4.74□□□□□ -1.65
MSH5-217ENST00000494458 DEFB130AP0DP74 79 aa4.74□□□□□ -1.65
MSH5-217ENST00000494458 FGF6P10767 208 aa4.74□□□□□ -1.65
MSH5-217ENST00000494458 PLNP26678 52 aa4.74□□□□□ -1.65
MSH5-217ENST00000494458 C12orf74Q32Q52 190 aa4.74□□□□□ -1.65
MSH5-217ENST00000494458 TMEM97Q5BJF2 176 aa4.74□□□□□ -1.65
MSH5-217ENST00000494458 PAPPA-AS1Q5QFB9 102 aa4.74□□□□□ -1.65
MSH5-217ENST00000494458 ATOH7Q8N100 152 aa4.74□□□□□ -1.65
MSH5-217ENST00000494458 PMCHL2Q9BQD1 86 aa4.74□□□□□ -1.65
MSH5-217ENST00000494458 PRO1933Q9H354 126 aa4.74□□□□□ -1.65
MSH5-217ENST00000494458 HUWE1Q7Z6Z7 4374 aaKnown RBP4.74□□□□□ -1.65
MSH5-217ENST00000494458 LOC100131303A0A0U1RQF7 123 aa4.73□□□□□ -1.65
MSH5-217ENST00000494458 GAGE12JA6NER3 117 aa4.73□□□□□ -1.65
MSH5-217ENST00000494458 ATP5G1P05496 136 aa4.73□□□□□ -1.65
MSH5-217ENST00000494458 COX8AP10176 69 aa4.73□□□□□ -1.65
MSH5-217ENST00000494458 EMP1P54849 157 aa4.73□□□□□ -1.65
MSH5-217ENST00000494458 GAGE1Q13065 139 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms