RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 GDF5OSQ5U4N7 250 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 Q5VV11 94 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 C12orf73Q69YU5 71 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 LINC00643Q86TS7 51 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 MGST2Q99735 147 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 SPHKAPQ2M3C7 1700 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 BCORL1Q5H9F3 1711 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 ALPK2Q86TB3 2170 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 ANKRD50Q9ULJ7 1429 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 LAMB4A4D0S4 1761 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 TET3O43151 1660 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 SCN3AQ9NY46 2000 aa0.88□□□□□ -2.27
LMNB1-207ENST00000494185 MYH1P12882 1939 aa0.87□□□□□ -2.27
LMNB1-207ENST00000494185 FREM1Q5H8C1 2179 aa0.87□□□□□ -2.27
LMNB1-207ENST00000494185 MUC4Q99102 2169 aa0.87□□□□□ -2.27
LMNB1-207ENST00000494185 C1orf167Q5SNV9 1468 aa0.87□□□□□ -2.27
LMNB1-207ENST00000494185 LRRC9Q6ZRR7 1453 aa0.87□□□□□ -2.27
LMNB1-207ENST00000494185 LRRIQ1Q96JM4 1722 aa0.87□□□□□ -2.27
LMNB1-207ENST00000494185 MARF1Q9Y4F3 1742 aaKnown RBP0.87□□□□□ -2.27
LMNB1-207ENST00000494185 PREX2Q70Z35 1606 aa0.87□□□□□ -2.27
LMNB1-207ENST00000494185 PLXNA4Q9HCM2 1894 aa0.87□□□□□ -2.27
LMNB1-207ENST00000494185 IGKV3-7A0A075B6H7 116 aa0.87□□□□□ -2.27
LMNB1-207ENST00000494185 TRBV6-7A0A0A0MS04 114 aa0.87□□□□□ -2.27
LMNB1-207ENST00000494185 A0A0G2JND7 137 aa0.87□□□□□ -2.27
LMNB1-207ENST00000494185 TEX49A0A1B0GTD5 131 aa0.87□□□□□ -2.27
LMNB1-207ENST00000494185 CXorf51AA0A1B0GTR3 108 aa0.87□□□□□ -2.27
LMNB1-207ENST00000494185 IQCF6A8MYZ5 107 aa0.87□□□□□ -2.27
LMNB1-207ENST00000494185 FXYD1O00168 92 aa0.87□□□□□ -2.27
LMNB1-207ENST00000494185 BCE1O60756 84 aa0.87□□□□□ -2.27
LMNB1-207ENST00000494185 FREM3P0C091 2139 aa0.87□□□□□ -2.27
LMNB1-207ENST00000494185 IL9P15248 144 aa0.87□□□□□ -2.27
LMNB1-207ENST00000494185 KLKP1Q107X0 134 aa0.87□□□□□ -2.27
LMNB1-207ENST00000494185 CASC2Q6XLA1 102 aa0.87□□□□□ -2.27
LMNB1-207ENST00000494185 SPTSSBQ8NFR3 76 aa0.87□□□□□ -2.27
LMNB1-207ENST00000494185 DYNLRB2Q8TF09 96 aa0.87□□□□□ -2.27
LMNB1-207ENST00000494185 CDC42SE1Q9NRR8 79 aa0.87□□□□□ -2.27
LMNB1-207ENST00000494185 PSENENQ9NZ42 101 aa0.87□□□□□ -2.27
LMNB1-207ENST00000494185 HILPDAQ9Y5L2 63 aa0.87□□□□□ -2.27
LMNB1-207ENST00000494185 NEXMIFQ5QGS0 1516 aa0.87□□□□□ -2.27
LMNB1-207ENST00000494185 LRRC7Q96NW7 1537 aa0.87□□□□□ -2.27
LMNB1-207ENST00000494185 USP54Q70EL1 1684 aa0.87□□□□□ -2.27
LMNB1-207ENST00000494185 SBF2Q86WG5 1849 aa0.87□□□□□ -2.27
LMNB1-207ENST00000494185 GLI2P10070 1586 aa0.87□□□□□ -2.27
LMNB1-207ENST00000494185 INO80Q9ULG1 1556 aaPredicted RBP0.87□□□□□ -2.27
LMNB1-207ENST00000494185 SETBP1Q9Y6X0 1596 aa0.87□□□□□ -2.27
LMNB1-207ENST00000494185 COL24A1Q17RW2 1714 aa0.86□□□□□ -2.27
LMNB1-207ENST00000494185 ABCA3Q99758 1704 aa0.86□□□□□ -2.27
LMNB1-207ENST00000494185 RALGAPBQ86X10 1494 aa0.86□□□□□ -2.27
LMNB1-207ENST00000494185 CDK13Q14004 1512 aaKnown RBP0.86□□□□□ -2.27
LMNB1-207ENST00000494185 COL4A6Q14031 1691 aa0.86□□□□□ -2.27
LMNB1-207ENST00000494185 IGKV2-40A0A087WW87 121 aaPredicted RBP0.86□□□□□ -2.27
LMNB1-207ENST00000494185 FXYD6-FXYD2A0A087WZ82 144 aa0.86□□□□□ -2.27
LMNB1-207ENST00000494185 IGLV3-32A0A0A0MS00 114 aa0.86□□□□□ -2.27
LMNB1-207ENST00000494185 A0A0J9YY99 117 aa0.86□□□□□ -2.27
LMNB1-207ENST00000494185 CLPSL1A2RUU4 121 aa0.86□□□□□ -2.27
LMNB1-207ENST00000494185 NDUFC1O43677 76 aa0.86□□□□□ -2.27
LMNB1-207ENST00000494185 IGKV2D-40P01614 121 aaPredicted RBP0.86□□□□□ -2.27
LMNB1-207ENST00000494185 ACYP1P07311 99 aa0.86□□□□□ -2.27
LMNB1-207ENST00000494185 PRB4P10163 310 aaPredicted RBP0.86□□□□□ -2.27
LMNB1-207ENST00000494185 PIPP12273 146 aaPredicted RBP0.86□□□□□ -2.27
LMNB1-207ENST00000494185 S100A3P33764 101 aa0.86□□□□□ -2.27
LMNB1-207ENST00000494185 UBE2D3P61077 147 aa0.86□□□□□ -2.27
LMNB1-207ENST00000494185 UBE2D2P62837 147 aa0.86□□□□□ -2.27
LMNB1-207ENST00000494185 TMEM170BQ5T4T1 132 aa0.86□□□□□ -2.27
LMNB1-207ENST00000494185 SPANXN1Q5VSR9 72 aa0.86□□□□□ -2.27
LMNB1-207ENST00000494185 SFTA2Q6UW10 78 aa0.86□□□□□ -2.27
LMNB1-207ENST00000494185 CYP2G1PQ6ZSU1 146 aa0.86□□□□□ -2.27
LMNB1-207ENST00000494185 VMO1Q7Z5L0 202 aa0.86□□□□□ -2.27
LMNB1-207ENST00000494185 DEFB107AQ8IZN7 70 aa0.86□□□□□ -2.27
LMNB1-207ENST00000494185 FXYD6Q9H0Q3 95 aa0.86□□□□□ -2.27
LMNB1-207ENST00000494185 CRCT1Q9UGL9 99 aa0.86□□□□□ -2.27
LMNB1-207ENST00000494185 PRRC2BQ5JSZ5 2229 aaKnown RBP0.86□□□□□ -2.27
LMNB1-207ENST00000494185 ABCA8O94911 1581 aa0.86□□□□□ -2.27
LMNB1-207ENST00000494185 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.86□□□□□ -2.27
LMNB1-207ENST00000494185 ANK1P16157 1881 aa0.86□□□□□ -2.27
LMNB1-207ENST00000494185 CDK12Q9NYV4 1490 aaPredicted RBP0.86□□□□□ -2.27
LMNB1-207ENST00000494185 LAMB2P55268 1798 aa0.85□□□□□ -2.27
LMNB1-207ENST00000494185 KIDINS220Q9ULH0 1771 aa0.85□□□□□ -2.27
LMNB1-207ENST00000494185 MYLKQ15746 1914 aa0.85□□□□□ -2.27
LMNB1-207ENST00000494185 EFCAB5A4FU69 1503 aa0.85□□□□□ -2.27
LMNB1-207ENST00000494185 COL11A1P12107 1806 aaPredicted RBP0.85□□□□□ -2.27
LMNB1-207ENST00000494185 TRBV7-3A0A075B6L6 115 aa0.85□□□□□ -2.27
LMNB1-207ENST00000494185 MYMXA0A1B0GTQ4 84 aa0.85□□□□□ -2.27
LMNB1-207ENST00000494185 LOC285095A0A1B0GVY8 99 aa0.85□□□□□ -2.27
LMNB1-207ENST00000494185 TMEM30CPA0ZSE6 113 aa0.85□□□□□ -2.27
LMNB1-207ENST00000494185 CRYM-AS1A6NIL9 109 aa0.85□□□□□ -2.27
LMNB1-207ENST00000494185 TMEM14DPA8MWL7 114 aa0.85□□□□□ -2.27
LMNB1-207ENST00000494185 MGAMO43451 1857 aa0.85□□□□□ -2.27
LMNB1-207ENST00000494185 ANGP03950 147 aaKnown RBP0.85□□□□□ -2.27
LMNB1-207ENST00000494185 HMGA1P17096 107 aaKnown RBP0.85□□□□□ -2.27
LMNB1-207ENST00000494185 CR1P17927 2039 aa0.85□□□□□ -2.27
LMNB1-207ENST00000494185 GCHFRP30047 84 aa0.85□□□□□ -2.27
LMNB1-207ENST00000494185 NCBP2-AS2Q69YL0 99 aa0.85□□□□□ -2.27
LMNB1-207ENST00000494185 SLC48A1Q6P1K1 146 aa0.85□□□□□ -2.27
LMNB1-207ENST00000494185 LINC00322Q6ZN03 302 aaPredicted RBP0.85□□□□□ -2.27
LMNB1-207ENST00000494185 NDUFA11Q86Y39 141 aa0.85□□□□□ -2.27
LMNB1-207ENST00000494185 C20orf197Q8N268 126 aa0.85□□□□□ -2.27
LMNB1-207ENST00000494185 FAM167A-AS1Q96KT0 104 aa0.85□□□□□ -2.27
LMNB1-207ENST00000494185 SMIM7Q9BQ49 75 aa0.85□□□□□ -2.27
LMNB1-207ENST00000494185 FAM103A1Q9BTL3 118 aaKnown RBP0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms