RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.67□□□□□ -1.02
CTDSP1-212ENST00000494067 AMTP48728 403 aa8.67□□□□□ -1.02
CTDSP1-212ENST00000494067 Q6ZNX1 250 aa8.67□□□□□ -1.02
CTDSP1-212ENST00000494067 C9orf163Q8N9P6 203 aa8.67□□□□□ -1.02
CTDSP1-212ENST00000494067 GFRA4Q9GZZ7 299 aa8.67□□□□□ -1.02
CTDSP1-212ENST00000494067 LRP1Q07954 4544 aaKnown RBP8.67□□□□□ -1.02
CTDSP1-212ENST00000494067 hDV102S1A0JD36 115 aa8.66□□□□□ -1.02
CTDSP1-212ENST00000494067 CTRLP40313 264 aa8.66□□□□□ -1.02
CTDSP1-212ENST00000494067 C20orf203Q8NBC4 194 aa8.66□□□□□ -1.02
CTDSP1-212ENST00000494067 DPH3Q96FX2 82 aa8.66□□□□□ -1.02
CTDSP1-212ENST00000494067 RNASE7Q9H1E1 156 aaKnown RBP8.66□□□□□ -1.02
CTDSP1-212ENST00000494067 DMBT1Q9UGM3 2413 aaPredicted RBP8.66□□□□□ -1.02
CTDSP1-212ENST00000494067 RPL37AP61513 92 aaKnown RBP8.65□□□□□ -1.02
CTDSP1-212ENST00000494067 BLOC1S1P78537 153 aa8.65□□□□□ -1.02
CTDSP1-212ENST00000494067 TEX261Q6UWH6 196 aa8.65□□□□□ -1.02
CTDSP1-212ENST00000494067 OCC1Q8TAD7 63 aa8.65□□□□□ -1.02
CTDSP1-212ENST00000494067 BORCS7Q96B45 105 aa8.65□□□□□ -1.02
CTDSP1-212ENST00000494067 IGLV4-60A0A075B6I1 120 aa8.64□□□□□ -1.03
CTDSP1-212ENST00000494067 PANO1I0J062 215 aa8.64□□□□□ -1.03
CTDSP1-212ENST00000494067 AMMECR1LQ6DCA0 310 aa8.64□□□□□ -1.03
CTDSP1-212ENST00000494067 CFAP161Q6P656 301 aa8.64□□□□□ -1.03
CTDSP1-212ENST00000494067 CNFNQ9BYD5 112 aa8.64□□□□□ -1.03
CTDSP1-212ENST00000494067 PKHD1L1Q86WI1 4243 aa8.63□□□□□ -1.03
CTDSP1-212ENST00000494067 hCG_2014768A0A024R1R8 64 aa8.63□□□□□ -1.03
CTDSP1-212ENST00000494067 IGHV3-64A0A075B6Q5 118 aa8.63□□□□□ -1.03
CTDSP1-212ENST00000494067 TRAV26-2A0A0B4J265 109 aa8.63□□□□□ -1.03
CTDSP1-212ENST00000494067 GATCO43716 136 aaKnown RBP8.63□□□□□ -1.03
CTDSP1-212ENST00000494067 NCR2O95944 276 aa8.63□□□□□ -1.03
CTDSP1-212ENST00000494067 OXTP01178 125 aa8.63□□□□□ -1.03
CTDSP1-212ENST00000494067 FOXA3P55318 350 aaPredicted RBP8.63□□□□□ -1.03
CTDSP1-212ENST00000494067 GTSF1Q8WW33 167 aa8.63□□□□□ -1.03
CTDSP1-212ENST00000494067 FAT3Q8TDW7 4589 aa8.63□□□□□ -1.03
CTDSP1-212ENST00000494067 A8MWL6 223 aa8.62□□□□□ -1.03
CTDSP1-212ENST00000494067 TMEM250H0YL14 139 aa8.62□□□□□ -1.03
CTDSP1-212ENST00000494067 CNBPP62633 177 aaKnown RBP8.62□□□□□ -1.03
CTDSP1-212ENST00000494067 ALKAL2Q6UX46 152 aa8.62□□□□□ -1.03
CTDSP1-212ENST00000494067 AKAP14Q86UN6 197 aa8.62□□□□□ -1.03
CTDSP1-212ENST00000494067 GATD1Q8NB37 220 aa8.62□□□□□ -1.03
CTDSP1-212ENST00000494067 IGKV3OR2-268A0A0C4DH90 116 aa8.61□□□□□ -1.03
CTDSP1-212ENST00000494067 H7C423 109 aa8.61□□□□□ -1.03
CTDSP1-212ENST00000494067 APCSP02743 223 aa8.61□□□□□ -1.03
CTDSP1-212ENST00000494067 CEBPGP53567 150 aa8.61□□□□□ -1.03
CTDSP1-212ENST00000494067 RNASEKQ6P5S7 137 aaKnown RBP8.61□□□□□ -1.03
CTDSP1-212ENST00000494067 SDIM1Q6ZPB5 146 aa8.61□□□□□ -1.03
CTDSP1-212ENST00000494067 PMCHP20382 165 aa8.6□□□□□ -1.03
CTDSP1-212ENST00000494067 SERTAD4-AS1Q5TG53 156 aa8.6□□□□□ -1.03
CTDSP1-212ENST00000494067 FAM231DQ6ZW35 169 aa8.6□□□□□ -1.03
CTDSP1-212ENST00000494067 LYPD6BQ8NI32 183 aa8.6□□□□□ -1.03
CTDSP1-212ENST00000494067 RPL39LQ96EH5 51 aaKnown RBP8.6□□□□□ -1.03
CTDSP1-212ENST00000494067 BTF3L4Q96K17 158 aa8.6□□□□□ -1.03
CTDSP1-212ENST00000494067 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.6□□□□□ -1.03
CTDSP1-212ENST00000494067 GAGE12HA6NDE8 117 aa8.59□□□□□ -1.03
CTDSP1-212ENST00000494067 GAS8-AS1O95177 125 aa8.59□□□□□ -1.03
CTDSP1-212ENST00000494067 SLPIP03973 132 aa8.59□□□□□ -1.03
CTDSP1-212ENST00000494067 TMEM101Q96IK0 257 aa8.59□□□□□ -1.03
CTDSP1-212ENST00000494067 EIF5A2Q9GZV4 153 aaKnown RBP8.59□□□□□ -1.03
CTDSP1-212ENST00000494067 SDHAF1A6NFY7 115 aa8.58□□□□□ -1.04
CTDSP1-212ENST00000494067 I3L3M4 83 aa8.58□□□□□ -1.04
CTDSP1-212ENST00000494067 ZNF25P17030 456 aaPredicted RBP8.58□□□□□ -1.04
CTDSP1-212ENST00000494067 HNRNPA3P51991 378 aaKnown RBP8.58□□□□□ -1.04
CTDSP1-212ENST00000494067 CT83Q5H943 113 aa8.58□□□□□ -1.04
CTDSP1-212ENST00000494067 RNF185Q96GF1 192 aa8.58□□□□□ -1.04
CTDSP1-212ENST00000494067 FAM210AQ96ND0 272 aa8.58□□□□□ -1.04
CTDSP1-212ENST00000494067 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.57□□□□□ -1.04
CTDSP1-212ENST00000494067 IGKV2-29A2NJV5 120 aaPredicted RBP8.57□□□□□ -1.04
CTDSP1-212ENST00000494067 A0A1B0GVG6 124 aa8.56□□□□□ -1.04
CTDSP1-212ENST00000494067 FGF6P10767 208 aa8.56□□□□□ -1.04
CTDSP1-212ENST00000494067 RPS10P46783 165 aaKnown RBP8.56□□□□□ -1.04
CTDSP1-212ENST00000494067 CHCHD10Q8WYQ3 142 aaPredicted RBP8.56□□□□□ -1.04
CTDSP1-212ENST00000494067 ST20Q9HBF5 79 aa8.56□□□□□ -1.04
CTDSP1-212ENST00000494067 A0A1B0GUT8 65 aa8.55□□□□□ -1.04
CTDSP1-212ENST00000494067 ZNF727A8MUV8 499 aa8.55□□□□□ -1.04
CTDSP1-212ENST00000494067 CIRBPQ14011 172 aaKnown RBP8.55□□□□□ -1.04
CTDSP1-212ENST00000494067 C15orf56Q8N910 161 aa8.55□□□□□ -1.04
CTDSP1-212ENST00000494067 SMIM7Q9BQ49 75 aa8.55□□□□□ -1.04
CTDSP1-212ENST00000494067 PKIGQ9Y2B9 76 aa8.55□□□□□ -1.04
CTDSP1-212ENST00000494067 TRBV6-5A0A0K0K1A5 114 aa8.54□□□□□ -1.04
CTDSP1-212ENST00000494067 FAM231BA6NCW3 169 aa8.54□□□□□ -1.04
CTDSP1-212ENST00000494067 NDUFS6O75380 124 aaKnown RBP8.54□□□□□ -1.04
CTDSP1-212ENST00000494067 HIGD2BQ4VC39 106 aa8.54□□□□□ -1.04
CTDSP1-212ENST00000494067 OR5A1Q8NGJ0 315 aa8.54□□□□□ -1.04
CTDSP1-212ENST00000494067 C7orf33Q8WU49 177 aa8.54□□□□□ -1.04
CTDSP1-212ENST00000494067 TSKUQ8WUA8 353 aa8.54□□□□□ -1.04
CTDSP1-212ENST00000494067 MRAP2Q96G30 205 aa8.54□□□□□ -1.04
CTDSP1-212ENST00000494067 TMEM191AQ9H0A3 160 aa8.54□□□□□ -1.04
CTDSP1-212ENST00000494067 A0A087WYN8 130 aa8.53□□□□□ -1.04
CTDSP1-212ENST00000494067 HIGD1CA8MV81 97 aa8.53□□□□□ -1.04
CTDSP1-212ENST00000494067 CHTF8P0CG12 524 aa8.53□□□□□ -1.04
CTDSP1-212ENST00000494067 SMAGPQ0VAQ4 97 aa8.53□□□□□ -1.04
CTDSP1-212ENST00000494067 RIGQ13278 110 aa8.53□□□□□ -1.04
CTDSP1-212ENST00000494067 SS18Q15532 418 aa8.53□□□□□ -1.04
CTDSP1-212ENST00000494067 SPACA4Q8TDM5 124 aa8.53□□□□□ -1.04
CTDSP1-212ENST00000494067 OSTCQ9NRP0 149 aa8.53□□□□□ -1.04
CTDSP1-212ENST00000494067 PPP1R17O96001 155 aa8.52□□□□□ -1.05
CTDSP1-212ENST00000494067 COX6A2Q02221 97 aa8.52□□□□□ -1.05
CTDSP1-212ENST00000494067 Q6ZRU5 148 aa8.52□□□□□ -1.05
CTDSP1-212ENST00000494067 LINC01551Q86U37 167 aa8.52□□□□□ -1.05
CTDSP1-212ENST00000494067 GVQW2A0A096LPI5 108 aaPredicted RBP8.51□□□□□ -1.05
CTDSP1-212ENST00000494067 SRP19P09132 144 aaKnown RBP8.51□□□□□ -1.05
CTDSP1-212ENST00000494067 FCER1GP30273 86 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 187.9 ms