RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 DUX3Q96PT4 197 aa7.86□□□□□ -1.15
PDLIM1-205ENST00000493949 GTSF1LQ9H1H1 148 aa7.86□□□□□ -1.15
PDLIM1-205ENST00000493949 C11orf21Q9P2W6 132 aa7.86□□□□□ -1.15
PDLIM1-205ENST00000493949 ZNF256Q9Y2P7 627 aaPredicted RBP7.86□□□□□ -1.15
PDLIM1-205ENST00000493949 AGRNO00468 2067 aa7.86□□□□□ -1.15
PDLIM1-205ENST00000493949 TRBV6-5A0A0K0K1A5 114 aa7.85□□□□□ -1.15
PDLIM1-205ENST00000493949 ATP5G2Q06055 141 aa7.85□□□□□ -1.15
PDLIM1-205ENST00000493949 SMAGPQ0VAQ4 97 aa7.85□□□□□ -1.15
PDLIM1-205ENST00000493949 PMVKQ15126 192 aa7.85□□□□□ -1.15
PDLIM1-205ENST00000493949 SVIPQ8NHG7 77 aa7.85□□□□□ -1.15
PDLIM1-205ENST00000493949 RASL10AQ92737 203 aa7.85□□□□□ -1.15
PDLIM1-205ENST00000493949 C16orf92Q96LL3 132 aa7.85□□□□□ -1.15
PDLIM1-205ENST00000493949 CCDC140Q96MF4 163 aa7.85□□□□□ -1.15
PDLIM1-205ENST00000493949 ODF3Q96PU9 254 aa7.85□□□□□ -1.15
PDLIM1-205ENST00000493949 TM2D3Q9BRN9 247 aa7.85□□□□□ -1.15
PDLIM1-205ENST00000493949 PHLDA3Q9Y5J5 127 aa7.85□□□□□ -1.15
PDLIM1-205ENST00000493949 A0A0J9YX75 114 aa7.84□□□□□ -1.15
PDLIM1-205ENST00000493949 H3BVH4 76 aa7.84□□□□□ -1.15
PDLIM1-205ENST00000493949 GAS8-AS1O95177 125 aa7.84□□□□□ -1.15
PDLIM1-205ENST00000493949 CD7P09564 240 aa7.84□□□□□ -1.15
PDLIM1-205ENST00000493949 GATA1P15976 413 aaPredicted RBP7.84□□□□□ -1.15
PDLIM1-205ENST00000493949 S100A4P26447 101 aaKnown RBP7.84□□□□□ -1.15
PDLIM1-205ENST00000493949 CRYBA4P53673 196 aa7.84□□□□□ -1.15
PDLIM1-205ENST00000493949 TNP2Q05952 138 aa7.84□□□□□ -1.15
PDLIM1-205ENST00000493949 RHOHQ15669 191 aa7.84□□□□□ -1.15
PDLIM1-205ENST00000493949 C19orf54Q5BKX5 351 aa7.84□□□□□ -1.15
PDLIM1-205ENST00000493949 SCGB1D4Q6XE38 83 aa7.84□□□□□ -1.15
PDLIM1-205ENST00000493949 USMG5Q96IX5 58 aa7.84□□□□□ -1.15
PDLIM1-205ENST00000493949 S4R3C0 116 aa7.84□□□□□ -1.15
PDLIM1-205ENST00000493949 PRSS29PA6NIE9 313 aa7.83□□□□□ -1.16
PDLIM1-205ENST00000493949 A8MWV9 139 aa7.83□□□□□ -1.16
PDLIM1-205ENST00000493949 VCYO14598 125 aa7.83□□□□□ -1.16
PDLIM1-205ENST00000493949 ATP6V0E1O15342 81 aa7.83□□□□□ -1.16
PDLIM1-205ENST00000493949 CKS1BP61024 79 aa7.83□□□□□ -1.16
PDLIM1-205ENST00000493949 SRSF9Q13242 221 aaKnown RBP eCLIP7.83□□□□□ -1.16
PDLIM1-205ENST00000493949 C10orf126Q8N4M7 172 aa7.83□□□□□ -1.16
PDLIM1-205ENST00000493949 RNF182Q8N6D2 247 aa7.83□□□□□ -1.16
PDLIM1-205ENST00000493949 ZFAND2AQ8N6M9 145 aa7.83□□□□□ -1.16
PDLIM1-205ENST00000493949 KIR2DL4Q99706 377 aa7.83□□□□□ -1.16
PDLIM1-205ENST00000493949 TTTY13Q9BZ97 58 aa7.83□□□□□ -1.16
PDLIM1-205ENST00000493949 ZNF580Q9UK33 172 aa7.83□□□□□ -1.16
PDLIM1-205ENST00000493949 MOB4Q9Y3A3 225 aa7.83□□□□□ -1.16
PDLIM1-205ENST00000493949 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.82□□□□□ -1.16
PDLIM1-205ENST00000493949 A0A0B4J2C4 111 aa7.82□□□□□ -1.16
PDLIM1-205ENST00000493949 SOCS3O14543 225 aa7.82□□□□□ -1.16
PDLIM1-205ENST00000493949 TSPAN13O95857 204 aa7.82□□□□□ -1.16
PDLIM1-205ENST00000493949 P0DMU3 169 aa7.82□□□□□ -1.16
PDLIM1-205ENST00000493949 FAM231AP0DMU4 169 aa7.82□□□□□ -1.16
PDLIM1-205ENST00000493949 FAM231CP0DMU5 169 aa7.82□□□□□ -1.16
PDLIM1-205ENST00000493949 CLEC19AQ6UXS0 136 aa7.82□□□□□ -1.16
PDLIM1-205ENST00000493949 NFE4Q86UQ8 179 aa7.82□□□□□ -1.16
PDLIM1-205ENST00000493949 SLC25A29Q8N8R3 303 aa7.82□□□□□ -1.16
PDLIM1-205ENST00000493949 SPANXDQ9BXN6 97 aa7.82□□□□□ -1.16
PDLIM1-205ENST00000493949 A0A0J9YY99 117 aa7.81□□□□□ -1.16
PDLIM1-205ENST00000493949 TRBV27A0A0K0K1C4 114 aa7.81□□□□□ -1.16
PDLIM1-205ENST00000493949 SDHAF1A6NFY7 115 aa7.81□□□□□ -1.16
PDLIM1-205ENST00000493949 IGIPA6NJ69 53 aa7.81□□□□□ -1.16
PDLIM1-205ENST00000493949 IGHV3-23P01764 117 aa7.81□□□□□ -1.16
PDLIM1-205ENST00000493949 PPIFP30405 207 aaKnown RBP7.81□□□□□ -1.16
PDLIM1-205ENST00000493949 POLR2KP53803 58 aaKnown RBP7.81□□□□□ -1.16
PDLIM1-205ENST00000493949 ECSCRQ19T08 205 aa7.81□□□□□ -1.16
PDLIM1-205ENST00000493949 IGFL4Q6B9Z1 124 aa7.81□□□□□ -1.16
PDLIM1-205ENST00000493949 C5orf56Q8N8D9 126 aa7.81□□□□□ -1.16
PDLIM1-205ENST00000493949 RAX2Q96IS3 184 aa7.81□□□□□ -1.16
PDLIM1-205ENST00000493949 ABCA13Q86UQ4 5058 aa7.8□□□□□ -1.16
PDLIM1-205ENST00000493949 TRAV26-2A0A0B4J265 109 aa7.8□□□□□ -1.16
PDLIM1-205ENST00000493949 CCL24O00175 119 aa7.8□□□□□ -1.16
PDLIM1-205ENST00000493949 LGALS9O00182 355 aa7.8□□□□□ -1.16
PDLIM1-205ENST00000493949 IGF1P05019 195 aa7.8□□□□□ -1.16
PDLIM1-205ENST00000493949 ZNF688P0C7X2 276 aa7.8□□□□□ -1.16
PDLIM1-205ENST00000493949 SH2D6Q7Z4S9 175 aa7.8□□□□□ -1.16
PDLIM1-205ENST00000493949 KLHL30-AS1Q8NEE0 82 aa7.8□□□□□ -1.16
PDLIM1-205ENST00000493949 LINC00476Q8WZB0 136 aa7.8□□□□□ -1.16
PDLIM1-205ENST00000493949 PLEKHB2Q96CS7 222 aa7.8□□□□□ -1.16
PDLIM1-205ENST00000493949 RNF183Q96D59 192 aa7.8□□□□□ -1.16
PDLIM1-205ENST00000493949 PRO1854Q9UHT4 67 aa7.8□□□□□ -1.16
PDLIM1-205ENST00000493949 LINC00527Q9UJ94 153 aa7.8□□□□□ -1.16
PDLIM1-205ENST00000493949 KIF25-AS1Q9Y6Z4 181 aa7.8□□□□□ -1.16
PDLIM1-205ENST00000493949 IGLV4-69A0A075B6H9 119 aa7.79□□□□□ -1.16
PDLIM1-205ENST00000493949 TRAV41A0A0B4J266 112 aa7.79□□□□□ -1.16
PDLIM1-205ENST00000493949 KLLNB2CW77 178 aa7.79□□□□□ -1.16
PDLIM1-205ENST00000493949 K7EMT4 169 aa7.79□□□□□ -1.16
PDLIM1-205ENST00000493949 IGHV3-30P01768 117 aa7.79□□□□□ -1.16
PDLIM1-205ENST00000493949 IGHV3-30-5P0DP03 117 aa7.79□□□□□ -1.16
PDLIM1-205ENST00000493949 ARL3P36405 182 aa7.79□□□□□ -1.16
PDLIM1-205ENST00000493949 ID1P41134 155 aa7.79□□□□□ -1.16
PDLIM1-205ENST00000493949 INSL3P51460 131 aa7.79□□□□□ -1.16
PDLIM1-205ENST00000493949 MRPL23Q16540 153 aaKnown RBP7.79□□□□□ -1.16
PDLIM1-205ENST00000493949 DEFB136Q30KP8 78 aa7.79□□□□□ -1.16
PDLIM1-205ENST00000493949 ZNF876PQ49A33 203 aa7.79□□□□□ -1.16
PDLIM1-205ENST00000493949 Q6Q795 121 aa7.79□□□□□ -1.16
PDLIM1-205ENST00000493949 ZFP2Q6ZN57 461 aa7.79□□□□□ -1.16
PDLIM1-205ENST00000493949 Q6ZUT4 128 aa7.79□□□□□ -1.16
PDLIM1-205ENST00000493949 GPHB5Q86YW7 130 aa7.79□□□□□ -1.16
PDLIM1-205ENST00000493949 SYT8Q8NBV8 401 aa7.79□□□□□ -1.16
PDLIM1-205ENST00000493949 IL17DQ8TAD2 202 aa7.79□□□□□ -1.16
PDLIM1-205ENST00000493949 CDIP1Q9H305 208 aa7.79□□□□□ -1.16
PDLIM1-205ENST00000493949 LEPROTO15243 131 aa7.78□□□□□ -1.16
PDLIM1-205ENST00000493949 SPINK8P0C7L1 97 aa7.78□□□□□ -1.16
PDLIM1-205ENST00000493949 AMTNQ6UX39 209 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 245.5 ms