RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 LINC00315P59091 139 aa10.16□□□□□ -0.78
VCP-207ENST00000493886 Q8N1Y9 231 aa10.16□□□□□ -0.78
VCP-207ENST00000493886 C1orf43Q9BWL3 253 aa10.16□□□□□ -0.78
VCP-207ENST00000493886 MDFICQ9P1T7 246 aa10.16□□□□□ -0.78
VCP-207ENST00000493886 SETD2Q9BYW2 2564 aaPredicted RBP10.16□□□□□ -0.78
VCP-207ENST00000493886 HELZ2Q9BYK8 2649 aaKnown RBP10.16□□□□□ -0.78
VCP-207ENST00000493886 ORMDL2Q53FV1 153 aa10.16□□□□□ -0.78
VCP-207ENST00000493886 FAM74A4Q5TZK3 123 aa10.16□□□□□ -0.78
VCP-207ENST00000493886 DYNLRB2Q8TF09 96 aa10.16□□□□□ -0.78
VCP-207ENST00000493886 BAALCQ8WXS3 180 aa10.16□□□□□ -0.78
VCP-207ENST00000493886 HRCT1Q6UXD1 115 aa10.15□□□□□ -0.78
VCP-207ENST00000493886 IGLL5B9A064 214 aa10.15□□□□□ -0.78
VCP-207ENST00000493886 F5H697 171 aa10.15□□□□□ -0.78
VCP-207ENST00000493886 HLA-DRB4P13762 266 aa10.15□□□□□ -0.78
VCP-207ENST00000493886 C12orf74Q32Q52 190 aa10.15□□□□□ -0.78
VCP-207ENST00000493886 C11orf44Q8N8P7 122 aa10.15□□□□□ -0.78
VCP-207ENST00000493886 MRAPQ8TCY5 172 aa10.15□□□□□ -0.78
VCP-207ENST00000493886 TOMM6Q96B49 74 aa10.15□□□□□ -0.78
VCP-207ENST00000493886 PKIGQ9Y2B9 76 aa10.15□□□□□ -0.78
VCP-207ENST00000493886 HLA-DRB4X5D2U9 266 aa10.15□□□□□ -0.78
VCP-207ENST00000493886 PPP1R17O96001 155 aa10.14□□□□□ -0.79
VCP-207ENST00000493886 NEXN-AS1Q8NBZ9 246 aa10.14□□□□□ -0.79
VCP-207ENST00000493886 ACANP16112 2415 aa10.14□□□□□ -0.79
VCP-207ENST00000493886 TRAV4A0A0B4J268 109 aa10.14□□□□□ -0.79
VCP-207ENST00000493886 RPL39P62891 51 aaKnown RBP10.14□□□□□ -0.79
VCP-207ENST00000493886 DEFB114Q30KQ6 69 aa10.14□□□□□ -0.79
VCP-207ENST00000493886 PRADC1Q9BSG0 188 aa10.14□□□□□ -0.79
VCP-207ENST00000493886 MYMXA0A1B0GTQ4 84 aa10.13□□□□□ -0.79
VCP-207ENST00000493886 A8MTW9 85 aa10.13□□□□□ -0.79
VCP-207ENST00000493886 H3BMM0 161 aa10.13□□□□□ -0.79
VCP-207ENST00000493886 C4orf26Q17RF5 130 aa10.13□□□□□ -0.79
VCP-207ENST00000493886 SCGB1D4Q6XE38 83 aa10.13□□□□□ -0.79
VCP-207ENST00000493886 ITPR2Q14571 2701 aa10.13□□□□□ -0.79
VCP-207ENST00000493886 J3KT08 172 aa10.13□□□□□ -0.79
VCP-207ENST00000493886 CD28P10747 220 aa10.13□□□□□ -0.79
VCP-207ENST00000493886 PLEKHB2Q96CS7 222 aa10.13□□□□□ -0.79
VCP-207ENST00000493886 TP53TG1Q9Y2A0 90 aa10.13□□□□□ -0.79
VCP-207ENST00000493886 KLK5Q9Y337 293 aaPredicted RBP10.13□□□□□ -0.79
VCP-207ENST00000493886 ZNF815PA8K554 130 aa10.12□□□□□ -0.79
VCP-207ENST00000493886 SUMO4Q6EEV6 95 aa10.12□□□□□ -0.79
VCP-207ENST00000493886 PRO0461Q9UI25 63 aa10.12□□□□□ -0.79
VCP-207ENST00000493886 WNK1Q9H4A3 2382 aa10.12□□□□□ -0.79
VCP-207ENST00000493886 TRAV12-1A0A0B4J245 112 aa10.12□□□□□ -0.79
VCP-207ENST00000493886 RBMY1A1P0DJD3 496 aaKnown RBP10.12□□□□□ -0.79
VCP-207ENST00000493886 RBMY1CP0DJD4 496 aa10.12□□□□□ -0.79
VCP-207ENST00000493886 RBMY1FQ15415 496 aaKnown RBP10.12□□□□□ -0.79
VCP-207ENST00000493886 LINC01587Q99440 93 aa10.12□□□□□ -0.79
VCP-207ENST00000493886 MAP6D1Q9H9H5 199 aa10.12□□□□□ -0.79
VCP-207ENST00000493886 AKAP9Q99996 3911 aa10.12□□□□□ -0.79
VCP-207ENST00000493886 TRBV7-3A0A075B6L6 115 aa10.11□□□□□ -0.79
VCP-207ENST00000493886 RBMY1BA6NDE4 496 aaKnown RBP10.11□□□□□ -0.79
VCP-207ENST00000493886 RBMY1EA6NEQ0 496 aaKnown RBP10.11□□□□□ -0.79
VCP-207ENST00000493886 E9PLD3 99 aa10.11□□□□□ -0.79
VCP-207ENST00000493886 RNASE1P07998 156 aaKnown RBP10.11□□□□□ -0.79
VCP-207ENST00000493886 RBMY1DP0C7P1 496 aaKnown RBP10.11□□□□□ -0.79
VCP-207ENST00000493886 RPL35AP18077 110 aaKnown RBP10.11□□□□□ -0.79
VCP-207ENST00000493886 TRGV11A0A075B6L2 103 aa10.11□□□□□ -0.79
VCP-207ENST00000493886 CRLF1O75462 422 aa10.11□□□□□ -0.79
VCP-207ENST00000493886 ZNF256Q9Y2P7 627 aaPredicted RBP10.11□□□□□ -0.79
VCP-207ENST00000493886 CCL24O00175 119 aa10.1□□□□□ -0.79
VCP-207ENST00000493886 SRSF9Q13242 221 aaKnown RBP eCLIP10.1□□□□□ -0.79
VCP-207ENST00000493886 LINC01006Q8NI28 216 aa10.1□□□□□ -0.79
VCP-207ENST00000493886 RS1O15537 224 aa10.1□□□□□ -0.79
VCP-207ENST00000493886 SNCGO76070 127 aa10.1□□□□□ -0.79
VCP-207ENST00000493886 UNC79Q9P2D8 2635 aa10.1□□□□□ -0.79
VCP-207ENST00000493886 C11orf86A6NJI1 115 aa10.1□□□□□ -0.79
VCP-207ENST00000493886 NACAE9PAV3 2078 aa10.09□□□□□ -0.79
VCP-207ENST00000493886 TINCRA0A1B0GVN0 87 aa10.09□□□□□ -0.79
VCP-207ENST00000493886 TSHBP01222 138 aa10.09□□□□□ -0.79
VCP-207ENST00000493886 C16orf95Q9H693 158 aa10.09□□□□□ -0.79
VCP-207ENST00000493886 CRYGDP07320 174 aa10.09□□□□□ -0.79
VCP-207ENST00000493886 NF1P21359 2839 aa10.08□□□□□ -0.8
VCP-207ENST00000493886 HTN1P15515 57 aa10.08□□□□□ -0.8
VCP-207ENST00000493886 POLR2KP53803 58 aaKnown RBP10.08□□□□□ -0.8
VCP-207ENST00000493886 ZNF876PQ49A33 203 aa10.08□□□□□ -0.8
VCP-207ENST00000493886 OPRPNQ99935 248 aaPredicted RBP10.08□□□□□ -0.8
VCP-207ENST00000493886 RRN3P1Q2M238 152 aa10.08□□□□□ -0.8
VCP-207ENST00000493886 ZFP2Q6ZN57 461 aa10.08□□□□□ -0.8
VCP-207ENST00000493886 C2CD3Q4AC94 2353 aa10.07□□□□□ -0.8
VCP-207ENST00000493886 SDHAF1A6NFY7 115 aa10.07□□□□□ -0.8
VCP-207ENST00000493886 ZNF56Q15929 161 aa10.07□□□□□ -0.8
VCP-207ENST00000493886 TMEM170BQ5T4T1 132 aa10.07□□□□□ -0.8
VCP-207ENST00000493886 CHCHD5Q9BSY4 110 aa10.07□□□□□ -0.8
VCP-207ENST00000493886 ANK3Q12955 4377 aaKnown RBP10.07□□□□□ -0.8
VCP-207ENST00000493886 MTORP42345 2549 aa10.07□□□□□ -0.8
VCP-207ENST00000493886 TAL2Q16559 108 aa10.07□□□□□ -0.8
VCP-207ENST00000493886 CARD19Q96LW7 228 aa10.06□□□□□ -0.8
VCP-207ENST00000493886 IGLV4-69A0A075B6H9 119 aa10.06□□□□□ -0.8
VCP-207ENST00000493886 LINC01549A6NIU2 74 aa10.06□□□□□ -0.8
VCP-207ENST00000493886 VCYO14598 125 aa10.06□□□□□ -0.8
VCP-207ENST00000493886 MORN3Q6PF18 240 aaPredicted RBP10.06□□□□□ -0.8
VCP-207ENST00000493886 IGHV3-64A0A075B6Q5 118 aa10.06□□□□□ -0.8
VCP-207ENST00000493886 TRBV6-5A0A0K0K1A5 114 aa10.06□□□□□ -0.8
VCP-207ENST00000493886 M0QY20 66 aa10.06□□□□□ -0.8
VCP-207ENST00000493886 SMCPP49901 116 aaPredicted RBP10.06□□□□□ -0.8
VCP-207ENST00000493886 HILS1P60008 231 aa10.06□□□□□ -0.8
VCP-207ENST00000493886 ODF3L2Q3SX64 289 aa10.06□□□□□ -0.8
VCP-207ENST00000493886 LOC107984156A0A0G2JMH3 177 aa10.05□□□□□ -0.8
VCP-207ENST00000493886 TSPEAR-AS2P59090 65 aa10.05□□□□□ -0.8
VCP-207ENST00000493886 ARL17AQ8IVW1 177 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 157.7 ms