RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 PHOX2AO14813 284 aa4.58□□□□□ -1.68
TRA2B-216ENST00000493864 NCR2O95944 276 aa4.58□□□□□ -1.68
TRA2B-216ENST00000493864 P0DMU3 169 aa4.58□□□□□ -1.68
TRA2B-216ENST00000493864 FAM231AP0DMU4 169 aa4.58□□□□□ -1.68
TRA2B-216ENST00000493864 FAM231CP0DMU5 169 aa4.58□□□□□ -1.68
TRA2B-216ENST00000493864 HTN3P15516 51 aa4.58□□□□□ -1.68
TRA2B-216ENST00000493864 CKS2P33552 79 aa4.58□□□□□ -1.68
TRA2B-216ENST00000493864 ZNF56Q15929 161 aa4.58□□□□□ -1.68
TRA2B-216ENST00000493864 Q6ZTC4 211 aa4.58□□□□□ -1.68
TRA2B-216ENST00000493864 ALKBH7Q9BT30 221 aaPredicted RBP4.58□□□□□ -1.68
TRA2B-216ENST00000493864 U3KQK5 164 aa4.58□□□□□ -1.68
TRA2B-216ENST00000493864 SACSQ9NZJ4 4579 aa4.58□□□□□ -1.68
TRA2B-216ENST00000493864 STARD9Q9P2P6 4700 aa4.57□□□□□ -1.68
TRA2B-216ENST00000493864 KRTAP29-1A8MX34 341 aaPredicted RBP4.57□□□□□ -1.68
TRA2B-216ENST00000493864 D6R8Y8 96 aa4.57□□□□□ -1.68
TRA2B-216ENST00000493864 F5H768 121 aa4.57□□□□□ -1.68
TRA2B-216ENST00000493864 CIDEAO60543 219 aa4.57□□□□□ -1.68
TRA2B-216ENST00000493864 ATP5G1P05496 136 aa4.57□□□□□ -1.68
TRA2B-216ENST00000493864 Q75L30 129 aa4.57□□□□□ -1.68
TRA2B-216ENST00000493864 SLC25A29Q8N8R3 303 aa4.57□□□□□ -1.68
TRA2B-216ENST00000493864 RPL39LQ96EH5 51 aaKnown RBP4.57□□□□□ -1.68
TRA2B-216ENST00000493864 MRAP2Q96G30 205 aa4.57□□□□□ -1.68
TRA2B-216ENST00000493864 PRELID3AQ96N28 172 aa4.57□□□□□ -1.68
TRA2B-216ENST00000493864 EDA2RQ9HAV5 297 aa4.57□□□□□ -1.68
TRA2B-216ENST00000493864 HHLA3Q9XRX5 114 aa4.57□□□□□ -1.68
TRA2B-216ENST00000493864 RYR3Q15413 4870 aa4.57□□□□□ -1.68
TRA2B-216ENST00000493864 A0A0J9YY99 117 aa4.56□□□□□ -1.68
TRA2B-216ENST00000493864 LOC100131303A0A0U1RQF7 123 aa4.56□□□□□ -1.68
TRA2B-216ENST00000493864 IFITM10A6NMD0 228 aa4.56□□□□□ -1.68
TRA2B-216ENST00000493864 NPYP01303 97 aa4.56□□□□□ -1.68
TRA2B-216ENST00000493864 PPBPP02775 128 aa4.56□□□□□ -1.68
TRA2B-216ENST00000493864 SRIP30626 198 aa4.56□□□□□ -1.68
TRA2B-216ENST00000493864 CRYBA4P53673 196 aa4.56□□□□□ -1.68
TRA2B-216ENST00000493864 ORMDL3Q8N138 153 aa4.56□□□□□ -1.68
TRA2B-216ENST00000493864 VSIG2Q96IQ7 327 aa4.56□□□□□ -1.68
TRA2B-216ENST00000493864 NIT2Q9NQR4 276 aa4.56□□□□□ -1.68
TRA2B-216ENST00000493864 PLECQ15149 4684 aaKnown RBP4.56□□□□□ -1.68
TRA2B-216ENST00000493864 DEFB131BA0A096LNP1 70 aa4.55□□□□□ -1.68
TRA2B-216ENST00000493864 LOC389332A0A1B0GUA5 103 aa4.55□□□□□ -1.68
TRA2B-216ENST00000493864 TRBV6-4A0A1B0GX49 114 aa4.55□□□□□ -1.68
TRA2B-216ENST00000493864 C1orf196B1AJZ1 125 aa4.55□□□□□ -1.68
TRA2B-216ENST00000493864 H7C1H1 209 aa4.55□□□□□ -1.68
TRA2B-216ENST00000493864 K7EQD1 137 aa4.55□□□□□ -1.68
TRA2B-216ENST00000493864 GAGE5Q13069 117 aa4.55□□□□□ -1.68
TRA2B-216ENST00000493864 IQCJQ1A5X6 159 aa4.55□□□□□ -1.68
TRA2B-216ENST00000493864 OR10J3Q5JRS4 329 aa4.55□□□□□ -1.68
TRA2B-216ENST00000493864 ZNRF2Q8NHG8 242 aa4.55□□□□□ -1.68
TRA2B-216ENST00000493864 DEFB104AQ8WTQ1 72 aa4.55□□□□□ -1.68
TRA2B-216ENST00000493864 PRO0255Q9UI72 69 aa4.55□□□□□ -1.68
TRA2B-216ENST00000493864 TRAV26-1A0A087WT03 109 aa4.54□□□□□ -1.68
TRA2B-216ENST00000493864 TRAV10A0A0B4J240 114 aa4.54□□□□□ -1.68
TRA2B-216ENST00000493864 TRBV6-5A0A0K0K1A5 114 aa4.54□□□□□ -1.68
TRA2B-216ENST00000493864 HIST1H2BKO60814 126 aa4.54□□□□□ -1.68
TRA2B-216ENST00000493864 HIST1H2BJP06899 126 aa4.54□□□□□ -1.68
TRA2B-216ENST00000493864 HIST1H2BOP23527 126 aa4.54□□□□□ -1.68
TRA2B-216ENST00000493864 HIST1H2BBP33778 126 aa4.54□□□□□ -1.68
TRA2B-216ENST00000493864 POLR2KP53803 58 aaKnown RBP4.54□□□□□ -1.68
TRA2B-216ENST00000493864 HIST1H2BDP58876 126 aa4.54□□□□□ -1.68
TRA2B-216ENST00000493864 HIST1H2BCP62807 126 aa4.54□□□□□ -1.68
TRA2B-216ENST00000493864 HIST2H2BEQ16778 126 aa4.54□□□□□ -1.68
TRA2B-216ENST00000493864 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.54□□□□□ -1.68
TRA2B-216ENST00000493864 KRTAP5-3Q6L8H2 238 aa4.54□□□□□ -1.68
TRA2B-216ENST00000493864 NEGR1Q7Z3B1 354 aa4.54□□□□□ -1.68
TRA2B-216ENST00000493864 C18orf32Q8TCD1 76 aa4.54□□□□□ -1.68
TRA2B-216ENST00000493864 PHLDA1Q8WV24 401 aaPredicted RBP4.54□□□□□ -1.68
TRA2B-216ENST00000493864 HIST1H2BHQ93079 126 aa4.54□□□□□ -1.68
TRA2B-216ENST00000493864 DNAJC30Q96LL9 226 aa4.54□□□□□ -1.68
TRA2B-216ENST00000493864 HIST1H2BNQ99877 126 aa4.54□□□□□ -1.68
TRA2B-216ENST00000493864 HIST1H2BMQ99879 126 aa4.54□□□□□ -1.68
TRA2B-216ENST00000493864 PRADC1Q9BSG0 188 aa4.54□□□□□ -1.68
TRA2B-216ENST00000493864 ST20Q9HBF5 79 aa4.54□□□□□ -1.68
TRA2B-216ENST00000493864 DNAH1Q9P2D7 4330 aa4.54□□□□□ -1.68
TRA2B-216ENST00000493864 TRBV7-3A0A075B6L6 115 aa4.53□□□□□ -1.68
TRA2B-216ENST00000493864 IGHV3-38A0A0C4DH36 116 aa4.53□□□□□ -1.68
TRA2B-216ENST00000493864 TRBV10-1A0A0K0K1A3 114 aa4.53□□□□□ -1.68
TRA2B-216ENST00000493864 SDHAF1A6NFY7 115 aa4.53□□□□□ -1.68
TRA2B-216ENST00000493864 PPP1R17O96001 155 aa4.53□□□□□ -1.68
TRA2B-216ENST00000493864 IFI27P40305 119 aaPredicted RBP4.53□□□□□ -1.68
TRA2B-216ENST00000493864 SNRPEP62304 92 aaKnown RBP4.53□□□□□ -1.68
TRA2B-216ENST00000493864 RHOHQ15669 191 aa4.53□□□□□ -1.68
TRA2B-216ENST00000493864 NIT1Q86X76 327 aa4.53□□□□□ -1.68
TRA2B-216ENST00000493864 C20orf78Q9BR46 151 aa4.53□□□□□ -1.68
TRA2B-216ENST00000493864 TMEM70Q9BUB7 260 aa4.53□□□□□ -1.68
TRA2B-216ENST00000493864 KRTAP9-8Q9BYQ0 159 aa4.53□□□□□ -1.68
TRA2B-216ENST00000493864 MAP1LC3AQ9H492 121 aa4.53□□□□□ -1.68
TRA2B-216ENST00000493864 LAMTOR2Q9Y2Q5 125 aa4.53□□□□□ -1.68
TRA2B-216ENST00000493864 LYSTQ99698 3801 aa4.53□□□□□ -1.68
TRA2B-216ENST00000493864 IGLV2-18A0A075B6J9 118 aa4.52□□□□□ -1.69
TRA2B-216ENST00000493864 A0A096LPF7 62 aa4.52□□□□□ -1.69
TRA2B-216ENST00000493864 NUPR1O60356 82 aa4.52□□□□□ -1.69
TRA2B-216ENST00000493864 LINC00694P0DN24 101 aa4.52□□□□□ -1.69
TRA2B-216ENST00000493864 PMCHP20382 165 aa4.52□□□□□ -1.69
TRA2B-216ENST00000493864 NDUFA6P56556 154 aa4.52□□□□□ -1.69
TRA2B-216ENST00000493864 RAB5BP61020 215 aa4.52□□□□□ -1.69
TRA2B-216ENST00000493864 UBE2D3P61077 147 aa4.52□□□□□ -1.69
TRA2B-216ENST00000493864 UBE2D2P62837 147 aa4.52□□□□□ -1.69
TRA2B-216ENST00000493864 RPL32P62910 135 aaKnown RBP4.52□□□□□ -1.69
TRA2B-216ENST00000493864 RPL24P83731 157 aaKnown RBP4.52□□□□□ -1.69
TRA2B-216ENST00000493864 Q0VG73 95 aa4.52□□□□□ -1.69
TRA2B-216ENST00000493864 BAGE3Q86Y29 109 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms