RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 MRPL54Q6P161 138 aaKnown RBP6.97□□□□□ -1.29
TRAPPC12-222ENST00000493792 Q8N976 141 aa6.97□□□□□ -1.29
TRAPPC12-222ENST00000493792 RMI2Q96E14 147 aa6.97□□□□□ -1.29
TRAPPC12-222ENST00000493792 TMEM243Q9BU79 118 aa6.97□□□□□ -1.29
TRAPPC12-222ENST00000493792 CHCHD7Q9BUK0 85 aa6.97□□□□□ -1.29
TRAPPC12-222ENST00000493792 A0A087WTM6 91 aa6.96□□□□□ -1.3
TRAPPC12-222ENST00000493792 SDHAF1A6NFY7 115 aa6.96□□□□□ -1.3
TRAPPC12-222ENST00000493792 NCR2O95944 276 aa6.96□□□□□ -1.3
TRAPPC12-222ENST00000493792 MT-ND4LP03901 98 aa6.96□□□□□ -1.3
TRAPPC12-222ENST00000493792 PMCHP20382 165 aa6.96□□□□□ -1.3
TRAPPC12-222ENST00000493792 FUSP35637 526 aaKnown RBP eCLIP6.96□□□□□ -1.3
TRAPPC12-222ENST00000493792 IQCJQ1A5X6 159 aa6.96□□□□□ -1.3
TRAPPC12-222ENST00000493792 ATRAIDQ6UW56 229 aa6.96□□□□□ -1.3
TRAPPC12-222ENST00000493792 CLPSL2Q6UWE3 100 aa6.96□□□□□ -1.3
TRAPPC12-222ENST00000493792 COMMD7Q86VX2 200 aa6.96□□□□□ -1.3
TRAPPC12-222ENST00000493792 FRZBQ92765 325 aa6.96□□□□□ -1.3
TRAPPC12-222ENST00000493792 A0A1B0GW15 77 aa6.95□□□□□ -1.3
TRAPPC12-222ENST00000493792 F8W036 122 aa6.95□□□□□ -1.3
TRAPPC12-222ENST00000493792 SMKR1H3BMG3 65 aa6.95□□□□□ -1.3
TRAPPC12-222ENST00000493792 GAS8-AS1O95177 125 aa6.95□□□□□ -1.3
TRAPPC12-222ENST00000493792 S100A8P05109 93 aa6.95□□□□□ -1.3
TRAPPC12-222ENST00000493792 RAB4AP20338 218 aa6.95□□□□□ -1.3
TRAPPC12-222ENST00000493792 KRTAP10-2P60368 255 aa6.95□□□□□ -1.3
TRAPPC12-222ENST00000493792 RBX1P62877 108 aa6.95□□□□□ -1.3
TRAPPC12-222ENST00000493792 HBBP68871 147 aa6.95□□□□□ -1.3
TRAPPC12-222ENST00000493792 UQCC3Q6UW78 93 aa6.95□□□□□ -1.3
TRAPPC12-222ENST00000493792 MRAP2Q96G30 205 aa6.95□□□□□ -1.3
TRAPPC12-222ENST00000493792 RNF185Q96GF1 192 aa6.95□□□□□ -1.3
TRAPPC12-222ENST00000493792 ST20Q9HBF5 79 aa6.95□□□□□ -1.3
TRAPPC12-222ENST00000493792 LECT2O14960 151 aa6.94□□□□□ -1.3
TRAPPC12-222ENST00000493792 APCSP02743 223 aa6.94□□□□□ -1.3
TRAPPC12-222ENST00000493792 Q0VG73 95 aa6.94□□□□□ -1.3
TRAPPC12-222ENST00000493792 ANAPC16Q96DE5 110 aa6.94□□□□□ -1.3
TRAPPC12-222ENST00000493792 COX11Q9Y6N1 276 aa6.94□□□□□ -1.3
TRAPPC12-222ENST00000493792 TMEM218A2RU14 115 aa6.93□□□□□ -1.3
TRAPPC12-222ENST00000493792 I3L3M4 83 aa6.93□□□□□ -1.3
TRAPPC12-222ENST00000493792 RPS10P46783 165 aaKnown RBP6.93□□□□□ -1.3
TRAPPC12-222ENST00000493792 FAM104BQ5XKR9 115 aa6.93□□□□□ -1.3
TRAPPC12-222ENST00000493792 AMMECR1LQ6DCA0 310 aa6.93□□□□□ -1.3
TRAPPC12-222ENST00000493792 LINC00269Q8N2A0 174 aa6.93□□□□□ -1.3
TRAPPC12-222ENST00000493792 BAALCQ8WXS3 180 aa6.93□□□□□ -1.3
TRAPPC12-222ENST00000493792 C1orf43Q9BWL3 253 aa6.93□□□□□ -1.3
TRAPPC12-222ENST00000493792 PGPEP1Q9NXJ5 209 aa6.93□□□□□ -1.3
TRAPPC12-222ENST00000493792 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.92□□□□□ -1.3
TRAPPC12-222ENST00000493792 TRBV6-5A0A0K0K1A5 114 aa6.92□□□□□ -1.3
TRAPPC12-222ENST00000493792 IGKV2-29A2NJV5 120 aaPredicted RBP6.92□□□□□ -1.3
TRAPPC12-222ENST00000493792 LRCOL1A6NCL2 159 aa6.92□□□□□ -1.3
TRAPPC12-222ENST00000493792 PPP1R17O96001 155 aa6.92□□□□□ -1.3
TRAPPC12-222ENST00000493792 CKS2P33552 79 aa6.92□□□□□ -1.3
TRAPPC12-222ENST00000493792 MRPL51Q4U2R6 128 aaKnown RBP6.92□□□□□ -1.3
TRAPPC12-222ENST00000493792 RNASEKQ6P5S7 137 aaKnown RBP6.92□□□□□ -1.3
TRAPPC12-222ENST00000493792 ENHOQ6UWT2 76 aa6.92□□□□□ -1.3
TRAPPC12-222ENST00000493792 TMEM70Q9BUB7 260 aa6.92□□□□□ -1.3
TRAPPC12-222ENST00000493792 TMEM242Q9NWH2 141 aa6.92□□□□□ -1.3
TRAPPC12-222ENST00000493792 IGLV4-60A0A075B6I1 120 aa6.91□□□□□ -1.3
TRAPPC12-222ENST00000493792 IGKV3OR2-268A0A0C4DH90 116 aa6.91□□□□□ -1.3
TRAPPC12-222ENST00000493792 EPM2AB3EWF7 344 aa6.91□□□□□ -1.3
TRAPPC12-222ENST00000493792 HLA-DQA1P01909 254 aa6.91□□□□□ -1.3
TRAPPC12-222ENST00000493792 INAFM2P0DMQ5 153 aa6.91□□□□□ -1.3
TRAPPC12-222ENST00000493792 ADCYAP1P18509 176 aa6.91□□□□□ -1.3
TRAPPC12-222ENST00000493792 FCER1GP30273 86 aa6.91□□□□□ -1.3
TRAPPC12-222ENST00000493792 VPS13BQ7Z7G8 4022 aa6.9□□□□□ -1.3
TRAPPC12-222ENST00000493792 IGLV10-54A0A075B6I4 117 aa6.9□□□□□ -1.3
TRAPPC12-222ENST00000493792 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.9□□□□□ -1.3
TRAPPC12-222ENST00000493792 IGLV5-52A0A0A0MRZ9 124 aa6.9□□□□□ -1.3
TRAPPC12-222ENST00000493792 A0A1B0GXF2 115 aa6.9□□□□□ -1.3
TRAPPC12-222ENST00000493792 VCYO14598 125 aa6.9□□□□□ -1.3
TRAPPC12-222ENST00000493792 SUMO2P61956 95 aaKnown RBP6.9□□□□□ -1.3
TRAPPC12-222ENST00000493792 REG3AQ06141 175 aa6.9□□□□□ -1.3
TRAPPC12-222ENST00000493792 WFDC2Q14508 124 aa6.9□□□□□ -1.3
TRAPPC12-222ENST00000493792 MIAQ16674 131 aa6.9□□□□□ -1.3
TRAPPC12-222ENST00000493792 CDPF1Q6NVV7 123 aa6.9□□□□□ -1.3
TRAPPC12-222ENST00000493792 ATP5L2Q7Z4Y8 100 aa6.9□□□□□ -1.3
TRAPPC12-222ENST00000493792 Q8N814 137 aa6.9□□□□□ -1.3
TRAPPC12-222ENST00000493792 BTF3L4Q96K17 158 aa6.9□□□□□ -1.3
TRAPPC12-222ENST00000493792 SEC11CQ9BY50 192 aa6.9□□□□□ -1.3
TRAPPC12-222ENST00000493792 SRRM2Q9UQ35 2752 aaKnown RBP6.9□□□□□ -1.31
TRAPPC12-222ENST00000493792 A0A1B0GUV1 79 aa6.89□□□□□ -1.31
TRAPPC12-222ENST00000493792 LINC00862A6NCI5 91 aa6.89□□□□□ -1.31
TRAPPC12-222ENST00000493792 D6R8Y8 96 aa6.89□□□□□ -1.31
TRAPPC12-222ENST00000493792 TSHBP01222 138 aa6.89□□□□□ -1.31
TRAPPC12-222ENST00000493792 NRACQ8N912 160 aa6.89□□□□□ -1.31
TRAPPC12-222ENST00000493792 C20orf203Q8NBC4 194 aa6.89□□□□□ -1.31
TRAPPC12-222ENST00000493792 TMEM101Q96IK0 257 aa6.89□□□□□ -1.31
TRAPPC12-222ENST00000493792 KIR2DL4Q99706 377 aa6.89□□□□□ -1.31
TRAPPC12-222ENST00000493792 FLG2Q5D862 2391 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC12-222ENST00000493792 TRBV27A0A0K0K1C4 114 aa6.88□□□□□ -1.31
TRAPPC12-222ENST00000493792 H7C423 109 aa6.88□□□□□ -1.31
TRAPPC12-222ENST00000493792 TNFRSF6BO95407 300 aa6.88□□□□□ -1.31
TRAPPC12-222ENST00000493792 FGF6P10767 208 aa6.88□□□□□ -1.31
TRAPPC12-222ENST00000493792 GCSHP23434 173 aa6.88□□□□□ -1.31
TRAPPC12-222ENST00000493792 POLR2KP53803 58 aaKnown RBP6.88□□□□□ -1.31
TRAPPC12-222ENST00000493792 NTN5Q8WTR8 489 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC12-222ENST00000493792 PRR34Q9NV39 138 aa6.88□□□□□ -1.31
TRAPPC12-222ENST00000493792 C7orf77A4D0Y5 90 aa6.87□□□□□ -1.31
TRAPPC12-222ENST00000493792 PPBPP02775 128 aa6.87□□□□□ -1.31
TRAPPC12-222ENST00000493792 S100PP25815 95 aa6.87□□□□□ -1.31
TRAPPC12-222ENST00000493792 XGP55808 180 aa6.87□□□□□ -1.31
TRAPPC12-222ENST00000493792 DGAT2L7PQ6IED9 249 aa6.87□□□□□ -1.31
TRAPPC12-222ENST00000493792 TMEM136Q6ZRR5 245 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms