RNA–Protein interactions for RNA: ENST00000493518.5

CACUL1-206, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-206ENST00000493518 TEX49A0A1B0GTD5 131 aa11.5□□□□□ -0.57
CACUL1-206ENST00000493518 RHODO00212 210 aa11.5□□□□□ -0.57
CACUL1-206ENST00000493518 SLURP1P55000 103 aa11.5□□□□□ -0.57
CACUL1-206ENST00000493518 UBE2D3P61077 147 aa11.5□□□□□ -0.57
CACUL1-206ENST00000493518 UBE2D2P62837 147 aa11.5□□□□□ -0.57
CACUL1-206ENST00000493518 LYRM7Q5U5X0 104 aa11.5□□□□□ -0.57
CACUL1-206ENST00000493518 FAM19A4Q96LR4 140 aa11.5□□□□□ -0.57
CACUL1-206ENST00000493518 C20orf203Q8NBC4 194 aa11.5□□□□□ -0.57
CACUL1-206ENST00000493518 TIMM21Q9BVV7 248 aa11.5□□□□□ -0.57
CACUL1-206ENST00000493518 IGLV4-3A0A075B6K6 122 aa11.5□□□□□ -0.57
CACUL1-206ENST00000493518 TRBV27A0A0K0K1C4 114 aa11.5□□□□□ -0.57
CACUL1-206ENST00000493518 CLEC2BQ92478 149 aa11.5□□□□□ -0.57
CACUL1-206ENST00000493518 I3L3M4 83 aa11.49□□□□□ -0.57
CACUL1-206ENST00000493518 RBMY1A1P0DJD3 496 aaKnown RBP11.49□□□□□ -0.57
CACUL1-206ENST00000493518 RBMY1CP0DJD4 496 aa11.49□□□□□ -0.57
CACUL1-206ENST00000493518 IGHV3-30-3P0DP02 117 aa11.49□□□□□ -0.57
CACUL1-206ENST00000493518 RBMY1FQ15415 496 aaKnown RBP11.49□□□□□ -0.57
CACUL1-206ENST00000493518 C10orf105Q8TEF2 133 aa11.49□□□□□ -0.57
CACUL1-206ENST00000493518 TIMM17AQ99595 171 aa11.49□□□□□ -0.57
CACUL1-206ENST00000493518 IGKV3OR2-268A0A0C4DH90 116 aa11.49□□□□□ -0.57
CACUL1-206ENST00000493518 CRYBA4P53673 196 aa11.49□□□□□ -0.57
CACUL1-206ENST00000493518 TCTEX1D4Q5JR98 221 aa11.49□□□□□ -0.57
CACUL1-206ENST00000493518 RNF183Q96D59 192 aa11.49□□□□□ -0.57
CACUL1-206ENST00000493518 HOXD3P31249 432 aaPredicted RBP11.48□□□□□ -0.57
CACUL1-206ENST00000493518 UBE2E2Q96LR5 201 aa11.48□□□□□ -0.57
CACUL1-206ENST00000493518 ADAMTSL4-AS1Q5T5F5 129 aa11.48□□□□□ -0.57
CACUL1-206ENST00000493518 DGAT2L7PQ6IED9 249 aa11.48□□□□□ -0.57
CACUL1-206ENST00000493518 Q6ZSN1 163 aa11.48□□□□□ -0.57
CACUL1-206ENST00000493518 TMEM223A0PJW6 202 aa11.48□□□□□ -0.57
CACUL1-206ENST00000493518 IGHV3-33P01772 117 aa11.48□□□□□ -0.57
CACUL1-206ENST00000493518 AMELXQ99217 191 aa11.47□□□□□ -0.57
CACUL1-206ENST00000493518 A0A0J9YXY3 114 aa11.47□□□□□ -0.57
CACUL1-206ENST00000493518 A0A1W2PRX2 142 aa11.47□□□□□ -0.57
CACUL1-206ENST00000493518 LINC01587Q99440 93 aa11.47□□□□□ -0.57
CACUL1-206ENST00000493518 NDUFA12Q9UI09 145 aa11.47□□□□□ -0.57
CACUL1-206ENST00000493518 GCN1Q92616 2671 aaKnown RBP11.47□□□□□ -0.57
CACUL1-206ENST00000493518 IGLV1-40P01703 118 aa11.47□□□□□ -0.57
CACUL1-206ENST00000493518 ANAPC13Q9BS18 74 aa11.47□□□□□ -0.57
CACUL1-206ENST00000493518 LGALS9O00182 355 aa11.46□□□□□ -0.57
CACUL1-206ENST00000493518 NDUFA7O95182 113 aa11.46□□□□□ -0.57
CACUL1-206ENST00000493518 CFHR3Q02985 330 aa11.46□□□□□ -0.57
CACUL1-206ENST00000493518 XCL2Q9UBD3 114 aa11.46□□□□□ -0.58
CACUL1-206ENST00000493518 LEPROTO15243 131 aa11.45□□□□□ -0.58
CACUL1-206ENST00000493518 MED14OSP0DP75 135 aa11.45□□□□□ -0.58
CACUL1-206ENST00000493518 FLNAP21333 2647 aaKnown RBP11.45□□□□□ -0.58
CACUL1-206ENST00000493518 TRIAP1O43715 76 aa11.45□□□□□ -0.58
CACUL1-206ENST00000493518 C9orf85Q96MD7 179 aa11.45□□□□□ -0.58
CACUL1-206ENST00000493518 CRLF1O75462 422 aa11.44□□□□□ -0.58
CACUL1-206ENST00000493518 TRAV13-1A0A0B4J241 112 aa11.44□□□□□ -0.58
CACUL1-206ENST00000493518 K7EQG2 157 aa11.44□□□□□ -0.58
CACUL1-206ENST00000493518 PSMB8P28062 276 aa11.44□□□□□ -0.58
CACUL1-206ENST00000493518 C3orf56Q8N813 242 aa11.44□□□□□ -0.58
CACUL1-206ENST00000493518 LINC01619G3V211 115 aa11.43□□□□□ -0.58
CACUL1-206ENST00000493518 TMEM263Q8WUH6 116 aaKnown RBP11.43□□□□□ -0.58
CACUL1-206ENST00000493518 SS18L2Q9UHA2 77 aa11.43□□□□□ -0.58
CACUL1-206ENST00000493518 TTC32Q5I0X7 151 aa11.43□□□□□ -0.58
CACUL1-206ENST00000493518 TEX29Q8N6K0 151 aa11.43□□□□□ -0.58
CACUL1-206ENST00000493518 B4DSR2 109 aa11.43□□□□□ -0.58
CACUL1-206ENST00000493518 NXPH4O95158 308 aa11.43□□□□□ -0.58
CACUL1-206ENST00000493518 C2orf82Q6UX34 121 aa11.43□□□□□ -0.58
CACUL1-206ENST00000493518 TRAV4A0A0B4J268 109 aa11.42□□□□□ -0.58
CACUL1-206ENST00000493518 LINC01620Q4KN68 170 aa11.42□□□□□ -0.58
CACUL1-206ENST00000493518 LINC00467Q9BRT7 94 aa11.42□□□□□ -0.58
CACUL1-206ENST00000493518 SNCGO76070 127 aa11.41□□□□□ -0.58
CACUL1-206ENST00000493518 B5MCH6 92 aa11.41□□□□□ -0.58
CACUL1-206ENST00000493518 SCGB1A1P11684 91 aa11.41□□□□□ -0.58
CACUL1-206ENST00000493518 KLK9Q2XQG4 91 aa11.41□□□□□ -0.58
CACUL1-206ENST00000493518 ZFAND6Q6FIF0 208 aa11.41□□□□□ -0.58
CACUL1-206ENST00000493518 TMEM61Q8N0U2 210 aa11.41□□□□□ -0.58
CACUL1-206ENST00000493518 CDKN2A-AS1Q9UH64 79 aa11.41□□□□□ -0.58
CACUL1-206ENST00000493518 SETXQ7Z333 2677 aaKnown RBP11.4□□□□□ -0.58
CACUL1-206ENST00000493518 M0R2P5 195 aa11.4□□□□□ -0.58
CACUL1-206ENST00000493518 PRB1P04280 392 aa11.39□□□□□ -0.59
CACUL1-206ENST00000493518 DYNLRB2Q8TF09 96 aa11.39□□□□□ -0.59
CACUL1-206ENST00000493518 H3BUA1 57 aa11.39□□□□□ -0.59
CACUL1-206ENST00000493518 RHOHQ15669 191 aa11.39□□□□□ -0.59
CACUL1-206ENST00000493518 ATXN8Q156A1 80 aa11.39□□□□□ -0.59
CACUL1-206ENST00000493518 POM121L12Q8N7R1 296 aa11.39□□□□□ -0.59
CACUL1-206ENST00000493518 TRGV11A0A075B6L2 103 aa11.39□□□□□ -0.59
CACUL1-206ENST00000493518 TRBV6-5A0A0K0K1A5 114 aa11.39□□□□□ -0.59
CACUL1-206ENST00000493518 RPL13AP40429 203 aaKnown RBP11.39□□□□□ -0.59
CACUL1-206ENST00000493518 NSUN5P1Q3KNT7 163 aa11.39□□□□□ -0.59
CACUL1-206ENST00000493518 K7EMT4 169 aa11.38□□□□□ -0.59
CACUL1-206ENST00000493518 GAGE2BQ13066 116 aa11.38□□□□□ -0.59
CACUL1-206ENST00000493518 GAGE2EQ4V326 116 aa11.38□□□□□ -0.59
CACUL1-206ENST00000493518 GAGE2DQ9UEU5 116 aa11.38□□□□□ -0.59
CACUL1-206ENST00000493518 ATP6V0E2Q8NHE4 81 aa11.38□□□□□ -0.59
CACUL1-206ENST00000493518 TRGV1A0A0A0MS02 117 aa11.37□□□□□ -0.59
CACUL1-206ENST00000493518 RBMY1BA6NDE4 496 aaKnown RBP11.37□□□□□ -0.59
CACUL1-206ENST00000493518 RBMY1EA6NEQ0 496 aaKnown RBP11.37□□□□□ -0.59
CACUL1-206ENST00000493518 RBMY1DP0C7P1 496 aaKnown RBP11.37□□□□□ -0.59
CACUL1-206ENST00000493518 TRAV8-4A0A0B4J246 113 aa11.37□□□□□ -0.59
CACUL1-206ENST00000493518 ITPR3Q14573 2671 aa11.37□□□□□ -0.59
CACUL1-206ENST00000493518 MEIG1Q5JSS6 88 aa11.37□□□□□ -0.59
CACUL1-206ENST00000493518 ICOSQ9Y6W8 199 aa11.37□□□□□ -0.59
CACUL1-206ENST00000493518 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.36□□□□□ -0.59
CACUL1-206ENST00000493518 C15orf53Q8NAA6 179 aa11.36□□□□□ -0.59
CACUL1-206ENST00000493518 TOMM7Q9P0U1 55 aa11.36□□□□□ -0.59
CACUL1-206ENST00000493518 TRBV7-9A0A0J9YWB2 115 aa11.35□□□□□ -0.59
CACUL1-206ENST00000493518 Q9H8V8 135 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms