RNA–Protein interactions for RNA: ENST00000493511.1

GTF3C2-212, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 3

Gene GTF3C2, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-212ENST00000493511 TMEM191AQ9H0A3 160 aa11.92□□□□□ -0.5
GTF3C2-212ENST00000493511 NAT8BQ9UHF3 227 aa11.92□□□□□ -0.5
GTF3C2-212ENST00000493511 UBE2L6O14933 153 aa11.91□□□□□ -0.5
GTF3C2-212ENST00000493511 AMTP48728 403 aa11.91□□□□□ -0.5
GTF3C2-212ENST00000493511 RIGQ13278 110 aa11.91□□□□□ -0.5
GTF3C2-212ENST00000493511 WFDC2Q14508 124 aa11.91□□□□□ -0.5
GTF3C2-212ENST00000493511 NUP35Q8NFH5 326 aa11.91□□□□□ -0.5
GTF3C2-212ENST00000493511 RPL39LQ96EH5 51 aaKnown RBP11.91□□□□□ -0.5
GTF3C2-212ENST00000493511 PRR34Q9NV39 138 aa11.91□□□□□ -0.5
GTF3C2-212ENST00000493511 A0A1B0GUV1 79 aa11.9□□□□□ -0.5
GTF3C2-212ENST00000493511 LINC00269Q8N2A0 174 aa11.9□□□□□ -0.5
GTF3C2-212ENST00000493511 SDHAF1A6NFY7 115 aa11.89□□□□□ -0.51
GTF3C2-212ENST00000493511 NCR2O95944 276 aa11.89□□□□□ -0.51
GTF3C2-212ENST00000493511 TRBV6-5A0A0K0K1A5 114 aa11.88□□□□□ -0.51
GTF3C2-212ENST00000493511 Q8N1X5 172 aa11.88□□□□□ -0.51
GTF3C2-212ENST00000493511 DEFB104AQ8WTQ1 72 aa11.88□□□□□ -0.51
GTF3C2-212ENST00000493511 MRAP2Q96G30 205 aa11.88□□□□□ -0.51
GTF3C2-212ENST00000493511 SMIM27A0A1W2PRY6 76 aa11.87□□□□□ -0.51
GTF3C2-212ENST00000493511 REG3AQ06141 175 aa11.87□□□□□ -0.51
GTF3C2-212ENST00000493511 C14orf177Q52M58 125 aa11.87□□□□□ -0.51
GTF3C2-212ENST00000493511 CLPSL2Q6UWE3 100 aa11.87□□□□□ -0.51
GTF3C2-212ENST00000493511 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.86□□□□□ -0.51
GTF3C2-212ENST00000493511 APCSP02743 223 aa11.86□□□□□ -0.51
GTF3C2-212ENST00000493511 RAB4AP20338 218 aa11.86□□□□□ -0.51
GTF3C2-212ENST00000493511 AMN1Q8IY45 258 aa11.86□□□□□ -0.51
GTF3C2-212ENST00000493511 TMEM70Q9BUB7 260 aa11.86□□□□□ -0.51
GTF3C2-212ENST00000493511 ST20Q9HBF5 79 aa11.86□□□□□ -0.51
GTF3C2-212ENST00000493511 A0A1B0GW15 77 aa11.85□□□□□ -0.51
GTF3C2-212ENST00000493511 I3L3M4 83 aa11.85□□□□□ -0.51
GTF3C2-212ENST00000493511 HLA-DQA1P01909 254 aa11.85□□□□□ -0.51
GTF3C2-212ENST00000493511 PMCHP20382 165 aa11.85□□□□□ -0.51
GTF3C2-212ENST00000493511 XGP55808 180 aa11.85□□□□□ -0.51
GTF3C2-212ENST00000493511 C20orf203Q8NBC4 194 aa11.85□□□□□ -0.51
GTF3C2-212ENST00000493511 RNF185Q96GF1 192 aa11.85□□□□□ -0.51
GTF3C2-212ENST00000493511 IGLV4-60A0A075B6I1 120 aa11.84□□□□□ -0.51
GTF3C2-212ENST00000493511 TRAV8-4A0A0B4J246 113 aa11.84□□□□□ -0.51
GTF3C2-212ENST00000493511 H7C423 109 aa11.84□□□□□ -0.51
GTF3C2-212ENST00000493511 PPP1R17O96001 155 aa11.84□□□□□ -0.51
GTF3C2-212ENST00000493511 AMMECR1LQ6DCA0 310 aa11.84□□□□□ -0.51
GTF3C2-212ENST00000493511 DNAH8Q96JB1 4490 aa11.84□□□□□ -0.51
GTF3C2-212ENST00000493511 FAT1Q14517 4588 aa11.83□□□□□ -0.52
GTF3C2-212ENST00000493511 GAS8-AS1O95177 125 aa11.82□□□□□ -0.52
GTF3C2-212ENST00000493511 KRTAP4-5Q9BYR2 181 aa11.82□□□□□ -0.52
GTF3C2-212ENST00000493511 IGLV10-54A0A075B6I4 117 aa11.81□□□□□ -0.52
GTF3C2-212ENST00000493511 USP17L23D6RBM5 183 aa11.81□□□□□ -0.52
GTF3C2-212ENST00000493511 PPP1R2P9O14990 202 aa11.81□□□□□ -0.52
GTF3C2-212ENST00000493511 S100A8P05109 93 aa11.81□□□□□ -0.52
GTF3C2-212ENST00000493511 RPS10P46783 165 aaKnown RBP11.81□□□□□ -0.52
GTF3C2-212ENST00000493511 CAMPP49913 170 aa11.81□□□□□ -0.52
GTF3C2-212ENST00000493511 PNRC1Q12796 327 aaPredicted RBP11.81□□□□□ -0.52
GTF3C2-212ENST00000493511 CLLU1Q5K131 121 aa11.81□□□□□ -0.52
GTF3C2-212ENST00000493511 FAM104BQ5XKR9 115 aa11.81□□□□□ -0.52
GTF3C2-212ENST00000493511 KRTAP17-1Q9BYP8 105 aa11.81□□□□□ -0.52
GTF3C2-212ENST00000493511 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.8□□□□□ -0.52
GTF3C2-212ENST00000493511 TRBV27A0A0K0K1C4 114 aa11.8□□□□□ -0.52
GTF3C2-212ENST00000493511 IGKV2-29A2NJV5 120 aaPredicted RBP11.8□□□□□ -0.52
GTF3C2-212ENST00000493511 POLR2KP53803 58 aaKnown RBP11.8□□□□□ -0.52
GTF3C2-212ENST00000493511 RNASEKQ6P5S7 137 aaKnown RBP11.8□□□□□ -0.52
GTF3C2-212ENST00000493511 SRRM2Q9UQ35 2752 aaKnown RBP11.8□□□□□ -0.52
GTF3C2-212ENST00000493511 F8W036 122 aa11.79□□□□□ -0.52
GTF3C2-212ENST00000493511 TSHBP01222 138 aa11.79□□□□□ -0.52
GTF3C2-212ENST00000493511 FGF6P10767 208 aa11.79□□□□□ -0.52
GTF3C2-212ENST00000493511 ZNF25P17030 456 aaPredicted RBP11.79□□□□□ -0.52
GTF3C2-212ENST00000493511 HBBP68871 147 aa11.79□□□□□ -0.52
GTF3C2-212ENST00000493511 KRTAP26-1Q6PEX3 210 aa11.79□□□□□ -0.52
GTF3C2-212ENST00000493511 TMEM242Q9NWH2 141 aa11.79□□□□□ -0.52
GTF3C2-212ENST00000493511 LINC00862A6NCI5 91 aa11.78□□□□□ -0.52
GTF3C2-212ENST00000493511 SMKR1H3BMG3 65 aa11.78□□□□□ -0.52
GTF3C2-212ENST00000493511 VCYO14598 125 aa11.78□□□□□ -0.52
GTF3C2-212ENST00000493511 SUMO2P61956 95 aaKnown RBP11.78□□□□□ -0.52
GTF3C2-212ENST00000493511 MRPL54Q6P161 138 aaKnown RBP11.78□□□□□ -0.52
GTF3C2-212ENST00000493511 BTF3L4Q96K17 158 aa11.78□□□□□ -0.52
GTF3C2-212ENST00000493511 EPM2AB3EWF7 344 aa11.77□□□□□ -0.53
GTF3C2-212ENST00000493511 MRPL51Q4U2R6 128 aaKnown RBP11.77□□□□□ -0.53
GTF3C2-212ENST00000493511 NRACQ8N912 160 aa11.77□□□□□ -0.53
GTF3C2-212ENST00000493511 CLRN3Q8NCR9 226 aa11.77□□□□□ -0.53
GTF3C2-212ENST00000493511 TMEM101Q96IK0 257 aa11.77□□□□□ -0.53
GTF3C2-212ENST00000493511 MT-ND4LP03901 98 aa11.76□□□□□ -0.53
GTF3C2-212ENST00000493511 ESDP10768 282 aa11.76□□□□□ -0.53
GTF3C2-212ENST00000493511 FCER1GP30273 86 aa11.76□□□□□ -0.53
GTF3C2-212ENST00000493511 CKS2P33552 79 aa11.76□□□□□ -0.53
GTF3C2-212ENST00000493511 Q6ZSA8 131 aa11.76□□□□□ -0.53
GTF3C2-212ENST00000493511 ATP5L2Q7Z4Y8 100 aa11.76□□□□□ -0.53
GTF3C2-212ENST00000493511 KIR2DL4Q99706 377 aa11.76□□□□□ -0.53
GTF3C2-212ENST00000493511 FAM30AQ9NZY2 134 aa11.76□□□□□ -0.53
GTF3C2-212ENST00000493511 IGKV3OR2-268A0A0C4DH90 116 aa11.75□□□□□ -0.53
GTF3C2-212ENST00000493511 A0A1B0GXF2 115 aa11.75□□□□□ -0.53
GTF3C2-212ENST00000493511 C7orf77A4D0Y5 90 aa11.75□□□□□ -0.53
GTF3C2-212ENST00000493511 PRSS1P07477 247 aa11.75□□□□□ -0.53
GTF3C2-212ENST00000493511 LINC01620Q4KN68 170 aa11.75□□□□□ -0.53
GTF3C2-212ENST00000493511 OR5A1Q8NGJ0 315 aa11.75□□□□□ -0.53
GTF3C2-212ENST00000493511 ANAPC16Q96DE5 110 aa11.75□□□□□ -0.53
GTF3C2-212ENST00000493511 C20orf78Q9BR46 151 aa11.75□□□□□ -0.53
GTF3C2-212ENST00000493511 VPS13BQ7Z7G8 4022 aa11.74□□□□□ -0.53
GTF3C2-212ENST00000493511 HAMPP81172 84 aa11.74□□□□□ -0.53
GTF3C2-212ENST00000493511 DGAT2L7PQ6IED9 249 aa11.74□□□□□ -0.53
GTF3C2-212ENST00000493511 TRBV24-1A0A075B6N3 115 aa11.73□□□□□ -0.53
GTF3C2-212ENST00000493511 SMAGPQ0VAQ4 97 aa11.73□□□□□ -0.53
GTF3C2-212ENST00000493511 UQCC3Q6UW78 93 aa11.73□□□□□ -0.53
GTF3C2-212ENST00000493511 MRPL52Q86TS9 123 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms