RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 VAMP3Q15836 100 aa10.05□□□□□ -0.8
PDZRN3-210ENST00000492909 ZFP2Q6ZN57 461 aa10.05□□□□□ -0.8
PDZRN3-210ENST00000492909 SBSPONQ8IVN8 264 aa10.05□□□□□ -0.8
PDZRN3-210ENST00000492909 RETNQ9HD89 108 aa10.05□□□□□ -0.8
PDZRN3-210ENST00000492909 IGHV3-73A0A0B4J1V6 119 aa10.04□□□□□ -0.8
PDZRN3-210ENST00000492909 TRAV4A0A0B4J268 109 aa10.04□□□□□ -0.8
PDZRN3-210ENST00000492909 LYRM9A8MSI8 78 aa10.04□□□□□ -0.8
PDZRN3-210ENST00000492909 DEFB4AO15263 64 aa10.04□□□□□ -0.8
PDZRN3-210ENST00000492909 ATP5LO75964 103 aa10.04□□□□□ -0.8
PDZRN3-210ENST00000492909 SUMO4Q6EEV6 95 aa10.04□□□□□ -0.8
PDZRN3-210ENST00000492909 PPP1R17O96001 155 aa10.03□□□□□ -0.8
PDZRN3-210ENST00000492909 FAM222AQ5U5X8 452 aa10.03□□□□□ -0.8
PDZRN3-210ENST00000492909 LINC00612Q8N6U2 182 aa10.03□□□□□ -0.8
PDZRN3-210ENST00000492909 PRKDCP78527 4128 aaKnown RBP10.03□□□□□ -0.8
PDZRN3-210ENST00000492909 DEFB130BP0DP73 79 aa10.03□□□□□ -0.8
PDZRN3-210ENST00000492909 DEFB130AP0DP74 79 aa10.03□□□□□ -0.8
PDZRN3-210ENST00000492909 HSD52Q0P140 79 aa10.03□□□□□ -0.8
PDZRN3-210ENST00000492909 LAGE3Q14657 143 aa10.03□□□□□ -0.8
PDZRN3-210ENST00000492909 ZNF479Q96JC4 524 aa10.03□□□□□ -0.8
PDZRN3-210ENST00000492909 H7C1H1 209 aa10.02□□□□□ -0.81
PDZRN3-210ENST00000492909 M0QY20 66 aa10.02□□□□□ -0.81
PDZRN3-210ENST00000492909 PRSS1P07477 247 aa10.02□□□□□ -0.81
PDZRN3-210ENST00000492909 RPL39LQ96EH5 51 aaKnown RBP10.02□□□□□ -0.81
PDZRN3-210ENST00000492909 K7EP13 123 aa10.01□□□□□ -0.81
PDZRN3-210ENST00000492909 CIDEAO60543 219 aa10.01□□□□□ -0.81
PDZRN3-210ENST00000492909 IGHV3-53P01767 116 aa10.01□□□□□ -0.81
PDZRN3-210ENST00000492909 IGKCP01834 107 aa10.01□□□□□ -0.81
PDZRN3-210ENST00000492909 NMUP48645 174 aa10.01□□□□□ -0.81
PDZRN3-210ENST00000492909 SPATA25Q9BR10 227 aa10.01□□□□□ -0.81
PDZRN3-210ENST00000492909 EDA2RQ9HAV5 297 aa10.01□□□□□ -0.81
PDZRN3-210ENST00000492909 ERASQ7Z444 233 aa10.01□□□□□ -0.81
PDZRN3-210ENST00000492909 PCP2Q8IVA1 136 aa10.01□□□□□ -0.81
PDZRN3-210ENST00000492909 C20orf78Q9BR46 151 aa10.01□□□□□ -0.81
PDZRN3-210ENST00000492909 TM2D3Q9BRN9 247 aa10.01□□□□□ -0.81
PDZRN3-210ENST00000492909 HHLA3Q9XRX5 114 aa10.01□□□□□ -0.81
PDZRN3-210ENST00000492909 A6NDN8 102 aa10□□□□□ -0.81
PDZRN3-210ENST00000492909 DPM2O94777 84 aa10□□□□□ -0.81
PDZRN3-210ENST00000492909 SPART-AS1P0CW21 52 aa10□□□□□ -0.81
PDZRN3-210ENST00000492909 TCTAP57738 103 aa10□□□□□ -0.81
PDZRN3-210ENST00000492909 SUMO2P61956 95 aaKnown RBP10□□□□□ -0.81
PDZRN3-210ENST00000492909 SMIM2Q9BVW6 85 aa10□□□□□ -0.81
PDZRN3-210ENST00000492909 TEX48A0A1B0GUV7 120 aa9.99□□□□□ -0.81
PDZRN3-210ENST00000492909 H3BRM9 83 aa9.99□□□□□ -0.81
PDZRN3-210ENST00000492909 AMMECR1LQ6DCA0 310 aa9.99□□□□□ -0.81
PDZRN3-210ENST00000492909 Q6ZSN1 163 aa9.99□□□□□ -0.81
PDZRN3-210ENST00000492909 C11orf68Q9H3H3 251 aaKnown RBP9.99□□□□□ -0.81
PDZRN3-210ENST00000492909 CELA1Q9UNI1 258 aa9.99□□□□□ -0.81
PDZRN3-210ENST00000492909 DAD1P61803 113 aa9.98□□□□□ -0.81
PDZRN3-210ENST00000492909 HIGD1BQ9P298 99 aa9.98□□□□□ -0.81
PDZRN3-210ENST00000492909 TRAV8-6A0A0B4J262 113 aa9.98□□□□□ -0.81
PDZRN3-210ENST00000492909 TRGV4A0A0C4DH28 118 aa9.98□□□□□ -0.81
PDZRN3-210ENST00000492909 TRBV6-5A0A0K0K1A5 114 aa9.98□□□□□ -0.81
PDZRN3-210ENST00000492909 A0A087WX48 190 aa9.97□□□□□ -0.81
PDZRN3-210ENST00000492909 IGKV2D-26A0A0A0MRZ7 120 aa9.97□□□□□ -0.81
PDZRN3-210ENST00000492909 K7EMI3 77 aa9.97□□□□□ -0.81
PDZRN3-210ENST00000492909 ORMDL2Q53FV1 153 aa9.97□□□□□ -0.81
PDZRN3-210ENST00000492909 SDHAF1A6NFY7 115 aa9.96□□□□□ -0.81
PDZRN3-210ENST00000492909 C9orf118A6NHY6 69 aa9.96□□□□□ -0.81
PDZRN3-210ENST00000492909 K7EQD1 137 aa9.96□□□□□ -0.81
PDZRN3-210ENST00000492909 P0DMU3 169 aa9.96□□□□□ -0.81
PDZRN3-210ENST00000492909 FAM231AP0DMU4 169 aa9.96□□□□□ -0.81
PDZRN3-210ENST00000492909 FAM231CP0DMU5 169 aa9.96□□□□□ -0.81
PDZRN3-210ENST00000492909 RPL32P62910 135 aaKnown RBP9.96□□□□□ -0.81
PDZRN3-210ENST00000492909 CBY1Q9Y3M2 126 aa9.96□□□□□ -0.81
PDZRN3-210ENST00000492909 TRAV12-1A0A0B4J245 112 aa9.96□□□□□ -0.82
PDZRN3-210ENST00000492909 TRBV6-4A0A1B0GX49 114 aa9.96□□□□□ -0.82
PDZRN3-210ENST00000492909 FHL2Q14192 279 aa9.96□□□□□ -0.82
PDZRN3-210ENST00000492909 ZC2HC1BQ5TFG8 222 aa9.96□□□□□ -0.82
PDZRN3-210ENST00000492909 SLC25A29Q8N8R3 303 aa9.96□□□□□ -0.82
PDZRN3-210ENST00000492909 MRPL35Q9NZE8 188 aaKnown RBP9.96□□□□□ -0.82
PDZRN3-210ENST00000492909 TNFRSF18Q9Y5U5 241 aa9.96□□□□□ -0.82
PDZRN3-210ENST00000492909 TENM3Q9P273 2699 aa9.95□□□□□ -0.82
PDZRN3-210ENST00000492909 TRBV10-1A0A0K0K1A3 114 aa9.95□□□□□ -0.82
PDZRN3-210ENST00000492909 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.95□□□□□ -0.82
PDZRN3-210ENST00000492909 POLR2KP53803 58 aaKnown RBP9.95□□□□□ -0.82
PDZRN3-210ENST00000492909 NEXN-AS1Q8NBZ9 246 aa9.95□□□□□ -0.82
PDZRN3-210ENST00000492909 TOMM6Q96B49 74 aa9.95□□□□□ -0.82
PDZRN3-210ENST00000492909 DNAJC30Q96LL9 226 aa9.95□□□□□ -0.82
PDZRN3-210ENST00000492909 A0A0J9YWU9 116 aa9.94□□□□□ -0.82
PDZRN3-210ENST00000492909 VCYO14598 125 aa9.94□□□□□ -0.82
PDZRN3-210ENST00000492909 ATP5G1P05496 136 aa9.94□□□□□ -0.82
PDZRN3-210ENST00000492909 B9D2Q9BPU9 175 aa9.94□□□□□ -0.82
PDZRN3-210ENST00000492909 Q9UF83 564 aa9.94□□□□□ -0.82
PDZRN3-210ENST00000492909 TRBV27A0A0K0K1C4 114 aa9.93□□□□□ -0.82
PDZRN3-210ENST00000492909 PLNP26678 52 aa9.93□□□□□ -0.82
PDZRN3-210ENST00000492909 RHOHQ15669 191 aa9.93□□□□□ -0.82
PDZRN3-210ENST00000492909 KIR2DL4Q99706 377 aa9.93□□□□□ -0.82
PDZRN3-210ENST00000492909 CHAC1Q9BUX1 264 aa9.93□□□□□ -0.82
PDZRN3-210ENST00000492909 COL7A1Q02388 2944 aa9.92□□□□□ -0.82
PDZRN3-210ENST00000492909 TRBV7-3A0A075B6L6 115 aa9.92□□□□□ -0.82
PDZRN3-210ENST00000492909 F8VRH5 84 aa9.92□□□□□ -0.82
PDZRN3-210ENST00000492909 RPL36AP83881 106 aaKnown RBP9.92□□□□□ -0.82
PDZRN3-210ENST00000492909 NEGR1Q7Z3B1 354 aa9.92□□□□□ -0.82
PDZRN3-210ENST00000492909 RPL36ALQ969Q0 106 aaKnown RBP9.92□□□□□ -0.82
PDZRN3-210ENST00000492909 SCGB3A1Q96QR1 104 aa9.92□□□□□ -0.82
PDZRN3-210ENST00000492909 PRADC1Q9BSG0 188 aa9.92□□□□□ -0.82
PDZRN3-210ENST00000492909 TTTY13Q9BZ97 58 aa9.92□□□□□ -0.82
PDZRN3-210ENST00000492909 PRO0255Q9UI72 69 aa9.92□□□□□ -0.82
PDZRN3-210ENST00000492909 TGP01266 2768 aa9.91□□□□□ -0.82
PDZRN3-210ENST00000492909 TRBV25-1A0A075B6N4 114 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms