RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.74□□□□□ -1.65
PDLIM1-204ENST00000492511 C20orf203Q8NBC4 194 aa4.74□□□□□ -1.65
PDLIM1-204ENST00000492511 BAALCQ8WXS3 180 aa4.74□□□□□ -1.65
PDLIM1-204ENST00000492511 KRTAP4-5Q9BYR2 181 aa4.74□□□□□ -1.65
PDLIM1-204ENST00000492511 PRR34Q9NV39 138 aa4.74□□□□□ -1.65
PDLIM1-204ENST00000492511 NAT8BQ9UHF3 227 aa4.74□□□□□ -1.65
PDLIM1-204ENST00000492511 IGKV2D-24A0A075B6R9 120 aa4.73□□□□□ -1.65
PDLIM1-204ENST00000492511 A0A1B0GUV1 79 aa4.73□□□□□ -1.65
PDLIM1-204ENST00000492511 SDHAF1A6NFY7 115 aa4.73□□□□□ -1.65
PDLIM1-204ENST00000492511 SMKR1H3BMG3 65 aa4.73□□□□□ -1.65
PDLIM1-204ENST00000492511 LECT2O14960 151 aa4.73□□□□□ -1.65
PDLIM1-204ENST00000492511 ANGP03950 147 aaKnown RBP4.73□□□□□ -1.65
PDLIM1-204ENST00000492511 POLR2KP53803 58 aaKnown RBP4.73□□□□□ -1.65
PDLIM1-204ENST00000492511 XGP55808 180 aa4.73□□□□□ -1.65
PDLIM1-204ENST00000492511 RAB14P61106 215 aa4.73□□□□□ -1.65
PDLIM1-204ENST00000492511 Q0VG73 95 aa4.73□□□□□ -1.65
PDLIM1-204ENST00000492511 RIGQ13278 110 aa4.73□□□□□ -1.65
PDLIM1-204ENST00000492511 CDPF1Q6NVV7 123 aa4.73□□□□□ -1.65
PDLIM1-204ENST00000492511 KCNIP4Q6PIL6 250 aa4.73□□□□□ -1.65
PDLIM1-204ENST00000492511 LINC00269Q8N2A0 174 aa4.73□□□□□ -1.65
PDLIM1-204ENST00000492511 BORCS7Q96B45 105 aa4.73□□□□□ -1.65
PDLIM1-204ENST00000492511 TMEM243Q9BU79 118 aa4.73□□□□□ -1.65
PDLIM1-204ENST00000492511 A0A1B0GXF2 115 aa4.72□□□□□ -1.65
PDLIM1-204ENST00000492511 GCSHP23434 173 aa4.72□□□□□ -1.65
PDLIM1-204ENST00000492511 PKIAP61925 76 aa4.72□□□□□ -1.65
PDLIM1-204ENST00000492511 COTL1Q14019 142 aa4.72□□□□□ -1.65
PDLIM1-204ENST00000492511 MRPL51Q4U2R6 128 aaKnown RBP4.72□□□□□ -1.65
PDLIM1-204ENST00000492511 FAM104BQ5XKR9 115 aa4.72□□□□□ -1.65
PDLIM1-204ENST00000492511 CLPSL2Q6UWE3 100 aa4.72□□□□□ -1.65
PDLIM1-204ENST00000492511 Q8N1X5 172 aa4.72□□□□□ -1.65
PDLIM1-204ENST00000492511 NRACQ8N912 160 aa4.72□□□□□ -1.65
PDLIM1-204ENST00000492511 RMI2Q96E14 147 aa4.72□□□□□ -1.65
PDLIM1-204ENST00000492511 MRAP2Q96G30 205 aa4.72□□□□□ -1.65
PDLIM1-204ENST00000492511 TMEM70Q9BUB7 260 aa4.72□□□□□ -1.65
PDLIM1-204ENST00000492511 COX11Q9Y6N1 276 aa4.72□□□□□ -1.65
PDLIM1-204ENST00000492511 DMBT1Q9UGM3 2413 aaPredicted RBP4.72□□□□□ -1.65
PDLIM1-204ENST00000492511 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.71□□□□□ -1.66
PDLIM1-204ENST00000492511 IGLV5-52A0A0A0MRZ9 124 aa4.71□□□□□ -1.66
PDLIM1-204ENST00000492511 IGKV2-29A2NJV5 120 aaPredicted RBP4.71□□□□□ -1.66
PDLIM1-204ENST00000492511 I3L3M4 83 aa4.71□□□□□ -1.66
PDLIM1-204ENST00000492511 NCR2O95944 276 aa4.71□□□□□ -1.66
PDLIM1-204ENST00000492511 TSHBP01222 138 aa4.71□□□□□ -1.66
PDLIM1-204ENST00000492511 ESDP10768 282 aa4.71□□□□□ -1.66
PDLIM1-204ENST00000492511 ADCYAP1P18509 176 aa4.71□□□□□ -1.66
PDLIM1-204ENST00000492511 AMTP48728 403 aa4.71□□□□□ -1.66
PDLIM1-204ENST00000492511 CAMPP49913 170 aa4.71□□□□□ -1.66
PDLIM1-204ENST00000492511 MIAQ16674 131 aa4.71□□□□□ -1.66
PDLIM1-204ENST00000492511 NTN5Q8WTR8 489 aaPredicted RBP4.71□□□□□ -1.66
PDLIM1-204ENST00000492511 ST20Q9HBF5 79 aa4.71□□□□□ -1.66
PDLIM1-204ENST00000492511 FAM30AQ9NZY2 134 aa4.71□□□□□ -1.66
PDLIM1-204ENST00000492511 PKHD1L1Q86WI1 4243 aa4.7□□□□□ -1.66
PDLIM1-204ENST00000492511 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.7□□□□□ -1.66
PDLIM1-204ENST00000492511 TRBV27A0A0K0K1C4 114 aa4.7□□□□□ -1.66
PDLIM1-204ENST00000492511 CRPP02741 224 aa4.7□□□□□ -1.66
PDLIM1-204ENST00000492511 PMCHP20382 165 aa4.7□□□□□ -1.66
PDLIM1-204ENST00000492511 REG3AQ06141 175 aa4.7□□□□□ -1.66
PDLIM1-204ENST00000492511 PNRC1Q12796 327 aaPredicted RBP4.7□□□□□ -1.66
PDLIM1-204ENST00000492511 MRPL54Q6P161 138 aaKnown RBP4.7□□□□□ -1.66
PDLIM1-204ENST00000492511 C1orf43Q9BWL3 253 aa4.7□□□□□ -1.66
PDLIM1-204ENST00000492511 TMEM242Q9NWH2 141 aa4.7□□□□□ -1.66
PDLIM1-204ENST00000492511 IGLV10-54A0A075B6I4 117 aa4.69□□□□□ -1.66
PDLIM1-204ENST00000492511 TRBV24-1A0A075B6N3 115 aa4.69□□□□□ -1.66
PDLIM1-204ENST00000492511 A0A1B0GW15 77 aa4.69□□□□□ -1.66
PDLIM1-204ENST00000492511 TMEM218A2RU14 115 aa4.69□□□□□ -1.66
PDLIM1-204ENST00000492511 UBE2L6O14933 153 aa4.69□□□□□ -1.66
PDLIM1-204ENST00000492511 PPP1R2P9O14990 202 aa4.69□□□□□ -1.66
PDLIM1-204ENST00000492511 APCSP02743 223 aa4.69□□□□□ -1.66
PDLIM1-204ENST00000492511 PRSS1P07477 247 aa4.69□□□□□ -1.66
PDLIM1-204ENST00000492511 HBBP68871 147 aa4.69□□□□□ -1.66
PDLIM1-204ENST00000492511 LINC01620Q4KN68 170 aa4.69□□□□□ -1.66
PDLIM1-204ENST00000492511 UQCC3Q6UW78 93 aa4.69□□□□□ -1.66
PDLIM1-204ENST00000492511 TRAV8-4A0A0B4J246 113 aa4.68□□□□□ -1.66
PDLIM1-204ENST00000492511 LINC00862A6NCI5 91 aa4.68□□□□□ -1.66
PDLIM1-204ENST00000492511 EPM2AB3EWF7 344 aa4.68□□□□□ -1.66
PDLIM1-204ENST00000492511 USP17L23D6RBM5 183 aa4.68□□□□□ -1.66
PDLIM1-204ENST00000492511 H7C423 109 aa4.68□□□□□ -1.66
PDLIM1-204ENST00000492511 VCYO14598 125 aa4.68□□□□□ -1.66
PDLIM1-204ENST00000492511 HLA-DQA1P01909 254 aa4.68□□□□□ -1.66
PDLIM1-204ENST00000492511 MT-ND4LP03901 98 aa4.68□□□□□ -1.66
PDLIM1-204ENST00000492511 FGF6P10767 208 aa4.68□□□□□ -1.66
PDLIM1-204ENST00000492511 SUMO2P61956 95 aaKnown RBP4.68□□□□□ -1.66
PDLIM1-204ENST00000492511 HAMPP81172 84 aa4.68□□□□□ -1.66
PDLIM1-204ENST00000492511 ATP5L2Q7Z4Y8 100 aa4.68□□□□□ -1.66
PDLIM1-204ENST00000492511 ANAPC16Q96DE5 110 aa4.68□□□□□ -1.66
PDLIM1-204ENST00000492511 HERC1Q15751 4861 aa4.67□□□□□ -1.66
PDLIM1-204ENST00000492511 D6R8Y8 96 aa4.67□□□□□ -1.66
PDLIM1-204ENST00000492511 F8W036 122 aa4.67□□□□□ -1.66
PDLIM1-204ENST00000492511 TNFRSF6BO95407 300 aa4.67□□□□□ -1.66
PDLIM1-204ENST00000492511 PPP1R17O96001 155 aa4.67□□□□□ -1.66
PDLIM1-204ENST00000492511 NPYP01303 97 aa4.67□□□□□ -1.66
PDLIM1-204ENST00000492511 CKS2P33552 79 aa4.67□□□□□ -1.66
PDLIM1-204ENST00000492511 RPL32P62910 135 aaKnown RBP4.67□□□□□ -1.66
PDLIM1-204ENST00000492511 RNASEKQ6P5S7 137 aaKnown RBP4.67□□□□□ -1.66
PDLIM1-204ENST00000492511 Q6ZSA8 131 aa4.67□□□□□ -1.66
PDLIM1-204ENST00000492511 MRPL52Q86TS9 123 aaKnown RBP4.67□□□□□ -1.66
PDLIM1-204ENST00000492511 COMMD7Q86VX2 200 aa4.67□□□□□ -1.66
PDLIM1-204ENST00000492511 C20orf78Q9BR46 151 aa4.67□□□□□ -1.66
PDLIM1-204ENST00000492511 IGKV3OR2-268A0A0C4DH90 116 aa4.66□□□□□ -1.66
PDLIM1-204ENST00000492511 C7orf77A4D0Y5 90 aa4.66□□□□□ -1.66
PDLIM1-204ENST00000492511 SLPIP03973 132 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms