RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 HLA-DMBP28068 263 aa9.47□□□□□ -0.89
HDAC3-213ENST00000492506 Q6ZTC4 211 aa9.47□□□□□ -0.89
HDAC3-213ENST00000492506 C18orf15Q96N68 181 aa9.47□□□□□ -0.89
HDAC3-213ENST00000492506 TRGV9Q99603 122 aa9.47□□□□□ -0.89
HDAC3-213ENST00000492506 RHPN1-AS1Q9BWJ2 59 aa9.47□□□□□ -0.89
HDAC3-213ENST00000492506 IGKV1OR2-108A0A075B7D4 117 aa9.46□□□□□ -0.9
HDAC3-213ENST00000492506 IGHV3-21A0A0B4J1V1 117 aa9.46□□□□□ -0.9
HDAC3-213ENST00000492506 MYMXA0A1B0GTQ4 84 aa9.46□□□□□ -0.9
HDAC3-213ENST00000492506 D6R8Y8 96 aa9.46□□□□□ -0.9
HDAC3-213ENST00000492506 K7EIM0 57 aa9.46□□□□□ -0.9
HDAC3-213ENST00000492506 CTSGP08311 255 aa9.46□□□□□ -0.9
HDAC3-213ENST00000492506 GIG44P09565 113 aaPredicted RBP9.46□□□□□ -0.9
HDAC3-213ENST00000492506 ARMS2P0C7Q2 107 aa9.46□□□□□ -0.9
HDAC3-213ENST00000492506 SCGB1C2P0DMR2 95 aa9.46□□□□□ -0.9
HDAC3-213ENST00000492506 PYYP10082 97 aa9.46□□□□□ -0.9
HDAC3-213ENST00000492506 UBE2D3P61077 147 aa9.46□□□□□ -0.9
HDAC3-213ENST00000492506 UBE2D2P62837 147 aa9.46□□□□□ -0.9
HDAC3-213ENST00000492506 HINT2Q9BX68 163 aa9.46□□□□□ -0.9
HDAC3-213ENST00000492506 Q9H3A6 140 aa9.46□□□□□ -0.9
HDAC3-213ENST00000492506 C21orf62Q9NYP8 219 aa9.46□□□□□ -0.9
HDAC3-213ENST00000492506 HHLA3Q9XRX5 114 aa9.46□□□□□ -0.9
HDAC3-213ENST00000492506 LRP1BQ9NZR2 4599 aa9.45□□□□□ -0.9
HDAC3-213ENST00000492506 IGKV3-7A0A075B6H7 116 aa9.45□□□□□ -0.9
HDAC3-213ENST00000492506 IGHV3-49A0A0A0MS15 119 aa9.45□□□□□ -0.9
HDAC3-213ENST00000492506 TRAV10A0A0B4J240 114 aa9.45□□□□□ -0.9
HDAC3-213ENST00000492506 IGHV4-28A0A0C4DH34 117 aa9.45□□□□□ -0.9
HDAC3-213ENST00000492506 NPYP01303 97 aa9.45□□□□□ -0.9
HDAC3-213ENST00000492506 GNG5P63218 68 aa9.45□□□□□ -0.9
HDAC3-213ENST00000492506 PVRIGQ6DKI7 326 aa9.45□□□□□ -0.9
HDAC3-213ENST00000492506 LINC00305Q7Z4B0 112 aa9.45□□□□□ -0.9
HDAC3-213ENST00000492506 POM121L12Q8N7R1 296 aa9.45□□□□□ -0.9
HDAC3-213ENST00000492506 PTH2Q96A98 100 aa9.45□□□□□ -0.9
HDAC3-213ENST00000492506 MDFICQ9P1T7 246 aa9.45□□□□□ -0.9
HDAC3-213ENST00000492506 TRAV12-1A0A0B4J245 112 aa9.44□□□□□ -0.9
HDAC3-213ENST00000492506 PRSS1P07477 247 aa9.44□□□□□ -0.9
HDAC3-213ENST00000492506 CKS2P33552 79 aa9.44□□□□□ -0.9
HDAC3-213ENST00000492506 ZC2HC1BQ5TFG8 222 aa9.44□□□□□ -0.9
HDAC3-213ENST00000492506 ZNF575Q86XF7 245 aa9.44□□□□□ -0.9
HDAC3-213ENST00000492506 DKK2Q9UBU2 259 aa9.44□□□□□ -0.9
HDAC3-213ENST00000492506 HERC1Q15751 4861 aa9.43□□□□□ -0.9
HDAC3-213ENST00000492506 IGHV3OR16-13A0A075B7E8 117 aa9.43□□□□□ -0.9
HDAC3-213ENST00000492506 IGHV3-74A0A0B4J1X5 117 aa9.43□□□□□ -0.9
HDAC3-213ENST00000492506 M0R2N4 97 aa9.43□□□□□ -0.9
HDAC3-213ENST00000492506 COX8CQ7Z4L0 72 aa9.43□□□□□ -0.9
HDAC3-213ENST00000492506 DNAJC30Q96LL9 226 aa9.43□□□□□ -0.9
HDAC3-213ENST00000492506 NDUFA4L2Q9NRX3 87 aa9.43□□□□□ -0.9
HDAC3-213ENST00000492506 X6R8D5 127 aa9.43□□□□□ -0.9
HDAC3-213ENST00000492506 LINC01549A6NIU2 74 aa9.42□□□□□ -0.9
HDAC3-213ENST00000492506 ATP5G1P05496 136 aa9.42□□□□□ -0.9
HDAC3-213ENST00000492506 MIFP14174 115 aa9.42□□□□□ -0.9
HDAC3-213ENST00000492506 SMCPP49901 116 aaPredicted RBP9.42□□□□□ -0.9
HDAC3-213ENST00000492506 UBE2D1P51668 147 aa9.42□□□□□ -0.9
HDAC3-213ENST00000492506 DEFB131AP59861 70 aa9.42□□□□□ -0.9
HDAC3-213ENST00000492506 MORN3Q6PF18 240 aaPredicted RBP9.42□□□□□ -0.9
HDAC3-213ENST00000492506 AMTNQ6UX39 209 aa9.42□□□□□ -0.9
HDAC3-213ENST00000492506 PATE2Q6UY27 113 aa9.42□□□□□ -0.9
HDAC3-213ENST00000492506 NFE4Q86UQ8 179 aa9.42□□□□□ -0.9
HDAC3-213ENST00000492506 NACAE9PAV3 2078 aa9.42□□□□□ -0.9
HDAC3-213ENST00000492506 APOBP04114 4563 aaKnown RBP9.42□□□□□ -0.9
HDAC3-213ENST00000492506 IGKV2D-26A0A0A0MRZ7 120 aa9.41□□□□□ -0.9
HDAC3-213ENST00000492506 P0DMU3 169 aa9.41□□□□□ -0.9
HDAC3-213ENST00000492506 FAM231AP0DMU4 169 aa9.41□□□□□ -0.9
HDAC3-213ENST00000492506 FAM231CP0DMU5 169 aa9.41□□□□□ -0.9
HDAC3-213ENST00000492506 MRPL51Q4U2R6 128 aaKnown RBP9.41□□□□□ -0.9
HDAC3-213ENST00000492506 TMEM78Q5T7P6 136 aa9.41□□□□□ -0.9
HDAC3-213ENST00000492506 Q6ZR54 194 aa9.41□□□□□ -0.9
HDAC3-213ENST00000492506 CARD19Q96LW7 228 aa9.41□□□□□ -0.9
HDAC3-213ENST00000492506 CELA1Q9UNI1 258 aa9.41□□□□□ -0.9
HDAC3-213ENST00000492506 LOC389332A0A1B0GUA5 103 aa9.4□□□□□ -0.9
HDAC3-213ENST00000492506 A0A1B0GX51 115 aa9.4□□□□□ -0.9
HDAC3-213ENST00000492506 I3L2K1 104 aa9.4□□□□□ -0.9
HDAC3-213ENST00000492506 K7EMI3 77 aa9.4□□□□□ -0.9
HDAC3-213ENST00000492506 PSMB2P49721 201 aa9.4□□□□□ -0.9
HDAC3-213ENST00000492506 MORN5Q5VZ52 161 aa9.4□□□□□ -0.9
HDAC3-213ENST00000492506 TRPT1Q86TN4 253 aaKnown RBP9.4□□□□□ -0.9
HDAC3-213ENST00000492506 Q8N8P6 123 aa9.4□□□□□ -0.9
HDAC3-213ENST00000492506 CSNK1G2-AS1Q8NCQ2 148 aa9.4□□□□□ -0.9
HDAC3-213ENST00000492506 DEFB131BA0A096LNP1 70 aa9.39□□□□□ -0.91
HDAC3-213ENST00000492506 TRAV2A0A0B4J234 112 aa9.39□□□□□ -0.91
HDAC3-213ENST00000492506 FAM240AA0A1B0GVK7 77 aa9.39□□□□□ -0.91
HDAC3-213ENST00000492506 H7C1H1 209 aa9.39□□□□□ -0.91
HDAC3-213ENST00000492506 RPL13AP40429 203 aaKnown RBP9.39□□□□□ -0.91
HDAC3-213ENST00000492506 PRNTQ86SH4 94 aa9.39□□□□□ -0.91
HDAC3-213ENST00000492506 IMUPQ9GZP8 106 aa9.39□□□□□ -0.91
HDAC3-213ENST00000492506 HIGD1AQ9Y241 93 aa9.39□□□□□ -0.91
HDAC3-213ENST00000492506 IGKV1D-37A0A075B6S9 117 aa9.38□□□□□ -0.91
HDAC3-213ENST00000492506 LEPP41159 167 aa9.38□□□□□ -0.91
HDAC3-213ENST00000492506 PDE6HQ13956 83 aa9.38□□□□□ -0.91
HDAC3-213ENST00000492506 MEIG1Q5JSS6 88 aa9.38□□□□□ -0.91
HDAC3-213ENST00000492506 PAPPA-AS1Q5QFB9 102 aa9.38□□□□□ -0.91
HDAC3-213ENST00000492506 STHQ8IWL8 128 aa9.38□□□□□ -0.91
HDAC3-213ENST00000492506 NPIPB3Q92617 1050 aa9.38□□□□□ -0.91
HDAC3-213ENST00000492506 CNFNQ9BYD5 112 aa9.38□□□□□ -0.91
HDAC3-213ENST00000492506 F8VRH5 84 aa9.37□□□□□ -0.91
HDAC3-213ENST00000492506 CCDC179H3BU77 68 aa9.37□□□□□ -0.91
HDAC3-213ENST00000492506 IGLV2-11P01706 119 aa9.37□□□□□ -0.91
HDAC3-213ENST00000492506 IGHV3-48P01763 117 aa9.37□□□□□ -0.91
HDAC3-213ENST00000492506 MFAP4P55083 255 aa9.37□□□□□ -0.91
HDAC3-213ENST00000492506 GOLT1AQ6ZVE7 132 aa9.37□□□□□ -0.91
HDAC3-213ENST00000492506 ANKRD29Q8N6D5 301 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms