RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 CLPSL2Q6UWE3 100 aa17.74■□□□□ 0.43
SH3GL3-204ENST00000492099 BORCS7Q96B45 105 aa17.74■□□□□ 0.43
SH3GL3-204ENST00000492099 HLA-DQA1P01909 254 aa17.73■□□□□ 0.43
SH3GL3-204ENST00000492099 UBE2L6O14933 153 aa17.72■□□□□ 0.43
SH3GL3-204ENST00000492099 INAFM2P0DMQ5 153 aa17.72■□□□□ 0.43
SH3GL3-204ENST00000492099 AMTP48728 403 aa17.72■□□□□ 0.43
SH3GL3-204ENST00000492099 REG3AQ06141 175 aa17.72■□□□□ 0.43
SH3GL3-204ENST00000492099 C20orf203Q8NBC4 194 aa17.72■□□□□ 0.43
SH3GL3-204ENST00000492099 TSKUQ8WUA8 353 aa17.72■□□□□ 0.43
SH3GL3-204ENST00000492099 GFRA4Q9GZZ7 299 aa17.72■□□□□ 0.43
SH3GL3-204ENST00000492099 OSTCQ9NRP0 149 aa17.72■□□□□ 0.43
SH3GL3-204ENST00000492099 DNAH8Q96JB1 4490 aa17.71■□□□□ 0.43
SH3GL3-204ENST00000492099 LINC01620Q4KN68 170 aa17.71■□□□□ 0.43
SH3GL3-204ENST00000492099 FAM231BA6NCW3 169 aa17.7■□□□□ 0.42
SH3GL3-204ENST00000492099 USP17L23D6RBM5 183 aa17.7■□□□□ 0.42
SH3GL3-204ENST00000492099 DEFB104AQ8WTQ1 72 aa17.7■□□□□ 0.42
SH3GL3-204ENST00000492099 IGLV4-60A0A075B6I1 120 aa17.69■□□□□ 0.42
SH3GL3-204ENST00000492099 TRAV8-4A0A0B4J246 113 aa17.69■□□□□ 0.42
SH3GL3-204ENST00000492099 KRTAP26-1Q6PEX3 210 aa17.69■□□□□ 0.42
SH3GL3-204ENST00000492099 A0A1B0GUT8 65 aa17.68■□□□□ 0.42
SH3GL3-204ENST00000492099 HIGD1CA8MV81 97 aa17.68■□□□□ 0.42
SH3GL3-204ENST00000492099 FAM74A3Q4VXF1 159 aa17.68■□□□□ 0.42
SH3GL3-204ENST00000492099 RPL39LQ96EH5 51 aaKnown RBP17.68■□□□□ 0.42
SH3GL3-204ENST00000492099 NCR2O95944 276 aa17.67■□□□□ 0.42
SH3GL3-204ENST00000492099 TMEM241Q24JQ0 296 aa17.66■□□□□ 0.42
SH3GL3-204ENST00000492099 IGLV10-54A0A075B6I4 117 aa17.64■□□□□ 0.41
SH3GL3-204ENST00000492099 SDHAF1A6NFY7 115 aa17.64■□□□□ 0.41
SH3GL3-204ENST00000492099 DGAT2L7PQ6IED9 249 aa17.64■□□□□ 0.41
SH3GL3-204ENST00000492099 TMEM191AQ9H0A3 160 aa17.64■□□□□ 0.41
SH3GL3-204ENST00000492099 PRSS1P07477 247 aa17.63■□□□□ 0.41
SH3GL3-204ENST00000492099 ISOC2Q96AB3 205 aa17.63■□□□□ 0.41
SH3GL3-204ENST00000492099 V9GYV3 84 aa17.63■□□□□ 0.41
SH3GL3-204ENST00000492099 TRBV6-5A0A0K0K1A5 114 aa17.62■□□□□ 0.41
SH3GL3-204ENST00000492099 H7C423 109 aa17.62■□□□□ 0.41
SH3GL3-204ENST00000492099 PEA15Q15121 130 aa17.62■□□□□ 0.41
SH3GL3-204ENST00000492099 CLRN3Q8NCR9 226 aa17.62■□□□□ 0.41
SH3GL3-204ENST00000492099 APCSP02743 223 aa17.61■□□□□ 0.41
SH3GL3-204ENST00000492099 CHAC1Q9BUX1 264 aa17.61■□□□□ 0.41
SH3GL3-204ENST00000492099 SMDT1Q9H4I9 107 aa17.61■□□□□ 0.41
SH3GL3-204ENST00000492099 VPS13BQ7Z7G8 4022 aa17.6■□□□□ 0.41
SH3GL3-204ENST00000492099 I3L3M4 83 aa17.6■□□□□ 0.41
SH3GL3-204ENST00000492099 PMCHP20382 165 aa17.6■□□□□ 0.41
SH3GL3-204ENST00000492099 RPL23P62829 140 aaKnown RBP17.6■□□□□ 0.41
SH3GL3-204ENST00000492099 AMMECR1LQ6DCA0 310 aa17.6■□□□□ 0.41
SH3GL3-204ENST00000492099 SCXQ7RTU7 201 aa17.6■□□□□ 0.41
SH3GL3-204ENST00000492099 SRRM2Q9UQ35 2752 aaKnown RBP17.6■□□□□ 0.41
SH3GL3-204ENST00000492099 C9JQL5 133 aa17.59■□□□□ 0.41
SH3GL3-204ENST00000492099 RIGQ13278 110 aa17.59■□□□□ 0.41
SH3GL3-204ENST00000492099 ST20Q9HBF5 79 aa17.59■□□□□ 0.41
SH3GL3-204ENST00000492099 NAT8Q9UHE5 227 aa17.59■□□□□ 0.41
SH3GL3-204ENST00000492099 PLA2G1BP04054 148 aaKnown RBP17.58■□□□□ 0.4
SH3GL3-204ENST00000492099 RAB4AP20338 218 aa17.58■□□□□ 0.4
SH3GL3-204ENST00000492099 ADIRFQ15847 76 aa17.58■□□□□ 0.4
SH3GL3-204ENST00000492099 NUP35Q8NFH5 326 aa17.58■□□□□ 0.4
SH3GL3-204ENST00000492099 MRAP2Q96G30 205 aa17.58■□□□□ 0.4
SH3GL3-204ENST00000492099 RNF185Q96GF1 192 aa17.58■□□□□ 0.4
SH3GL3-204ENST00000492099 LINC00528Q8N1L1 170 aa17.57■□□□□ 0.4
SH3GL3-204ENST00000492099 NAT8BQ9UHF3 227 aa17.57■□□□□ 0.4
SH3GL3-204ENST00000492099 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.56■□□□□ 0.4
SH3GL3-204ENST00000492099 IGKV2-29A2NJV5 120 aaPredicted RBP17.56■□□□□ 0.4
SH3GL3-204ENST00000492099 SRSF3P84103 164 aaKnown RBP17.56■□□□□ 0.4
SH3GL3-204ENST00000492099 RNASEKQ6P5S7 137 aaKnown RBP17.56■□□□□ 0.4
SH3GL3-204ENST00000492099 AMN1Q8IY45 258 aa17.56■□□□□ 0.4
SH3GL3-204ENST00000492099 C9orf163Q8N9P6 203 aa17.56■□□□□ 0.4
SH3GL3-204ENST00000492099 GAS8-AS1O95177 125 aa17.55■□□□□ 0.4
SH3GL3-204ENST00000492099 FGF6P10767 208 aa17.54■□□□□ 0.4
SH3GL3-204ENST00000492099 CIRBP-AS1Q8TBR5 109 aa17.54■□□□□ 0.4
SH3GL3-204ENST00000492099 hDV102S1A0JD36 115 aa17.53■□□□□ 0.4
SH3GL3-204ENST00000492099 ZNF25P17030 456 aaPredicted RBP17.53■□□□□ 0.4
SH3GL3-204ENST00000492099 IGKV3OR2-268A0A0C4DH90 116 aa17.52■□□□□ 0.4
SH3GL3-204ENST00000492099 POLR2KP53803 58 aaKnown RBP17.52■□□□□ 0.4
SH3GL3-204ENST00000492099 TRBV27A0A0K0K1C4 114 aa17.51■□□□□ 0.39
SH3GL3-204ENST00000492099 PPP1R17O96001 155 aa17.51■□□□□ 0.39
SH3GL3-204ENST00000492099 TSHBP01222 138 aa17.51■□□□□ 0.39
SH3GL3-204ENST00000492099 ESDP10768 282 aa17.51■□□□□ 0.39
SH3GL3-204ENST00000492099 RPS10P46783 165 aaKnown RBP17.51■□□□□ 0.39
SH3GL3-204ENST00000492099 CNBPP62633 177 aaKnown RBP17.51■□□□□ 0.39
SH3GL3-204ENST00000492099 BTF3L4Q96K17 158 aa17.51■□□□□ 0.39
SH3GL3-204ENST00000492099 AP5S1Q9NUS5 200 aa17.51■□□□□ 0.39
SH3GL3-204ENST00000492099 SMIM27A0A1W2PRY6 76 aa17.5■□□□□ 0.39
SH3GL3-204ENST00000492099 GAGE12HA6NDE8 117 aa17.5■□□□□ 0.39
SH3GL3-204ENST00000492099 CFAP161Q6P656 301 aa17.5■□□□□ 0.39
SH3GL3-204ENST00000492099 TMEM101Q96IK0 257 aa17.5■□□□□ 0.39
SH3GL3-204ENST00000492099 TMEM242Q9NWH2 141 aa17.5■□□□□ 0.39
SH3GL3-204ENST00000492099 A0A1B0GW15 77 aa17.47■□□□□ 0.39
SH3GL3-204ENST00000492099 VCYO14598 125 aa17.47■□□□□ 0.39
SH3GL3-204ENST00000492099 OR5A1Q8NGJ0 315 aa17.47■□□□□ 0.39
SH3GL3-204ENST00000492099 CHCHD10Q8WYQ3 142 aaPredicted RBP17.47■□□□□ 0.39
SH3GL3-204ENST00000492099 FLG2Q5D862 2391 aaPredicted RBP17.46■□□□□ 0.39
SH3GL3-204ENST00000492099 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.46■□□□□ 0.39
SH3GL3-204ENST00000492099 SDIM1Q6ZPB5 146 aa17.46■□□□□ 0.39
SH3GL3-204ENST00000492099 SMKR1H3BMG3 65 aa17.45■□□□□ 0.38
SH3GL3-204ENST00000492099 FAM104BQ5XKR9 115 aa17.45■□□□□ 0.38
SH3GL3-204ENST00000492099 C7orf77A4D0Y5 90 aa17.44■□□□□ 0.38
SH3GL3-204ENST00000492099 SUMO2P61956 95 aaKnown RBP17.44■□□□□ 0.38
SH3GL3-204ENST00000492099 MRPL52Q86TS9 123 aaKnown RBP17.44■□□□□ 0.38
SH3GL3-204ENST00000492099 NRACQ8N912 160 aa17.44■□□□□ 0.38
SH3GL3-204ENST00000492099 PPP1R2P9O14990 202 aa17.43■□□□□ 0.38
SH3GL3-204ENST00000492099 FCER1GP30273 86 aa17.43■□□□□ 0.38
SH3GL3-204ENST00000492099 CAMPP49913 170 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms