RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 SRSF9Q13242 221 aaKnown RBP eCLIP8.59□□□□□ -1.03
ATG4B-222ENST00000491867 FER1L6-AS1Q8NA97 138 aa8.59□□□□□ -1.03
ATG4B-222ENST00000491867 C11orf52Q96A22 123 aa8.59□□□□□ -1.03
ATG4B-222ENST00000491867 A0A1B0GUV1 79 aa8.58□□□□□ -1.04
ATG4B-222ENST00000491867 NKX2-5P52952 324 aaPredicted RBP8.58□□□□□ -1.04
ATG4B-222ENST00000491867 COX6A2Q02221 97 aa8.58□□□□□ -1.04
ATG4B-222ENST00000491867 CENPWQ5EE01 88 aa8.58□□□□□ -1.04
ATG4B-222ENST00000491867 TMEM243Q9BU79 118 aa8.58□□□□□ -1.04
ATG4B-222ENST00000491867 GFRA4Q9GZZ7 299 aa8.58□□□□□ -1.04
ATG4B-222ENST00000491867 IGLV4-60A0A075B6I1 120 aa8.57□□□□□ -1.04
ATG4B-222ENST00000491867 IGKV2-24A0A0C4DH68 120 aa8.57□□□□□ -1.04
ATG4B-222ENST00000491867 BCL2L11O43521 198 aa8.57□□□□□ -1.04
ATG4B-222ENST00000491867 RPS20P60866 119 aaKnown RBP8.57□□□□□ -1.04
ATG4B-222ENST00000491867 CACNG7P62955 275 aa8.57□□□□□ -1.04
ATG4B-222ENST00000491867 RGS21Q2M5E4 152 aa8.57□□□□□ -1.04
ATG4B-222ENST00000491867 RASL11AQ6T310 242 aa8.57□□□□□ -1.04
ATG4B-222ENST00000491867 STPG4Q8N801 248 aa8.57□□□□□ -1.04
ATG4B-222ENST00000491867 OR2D3Q8NGH3 330 aa8.57□□□□□ -1.04
ATG4B-222ENST00000491867 PGLYRP4Q96LB8 373 aa8.57□□□□□ -1.04
ATG4B-222ENST00000491867 MANBALQ9NQG1 85 aa8.57□□□□□ -1.04
ATG4B-222ENST00000491867 C19orf71A6NCJ1 209 aa8.56□□□□□ -1.04
ATG4B-222ENST00000491867 GNG13Q9P2W3 67 aa8.56□□□□□ -1.04
ATG4B-222ENST00000491867 KANTRA0A1W2PQU2 76 aa8.55□□□□□ -1.04
ATG4B-222ENST00000491867 FAM231BA6NCW3 169 aa8.55□□□□□ -1.04
ATG4B-222ENST00000491867 HMSDA8MTL9 139 aa8.55□□□□□ -1.04
ATG4B-222ENST00000491867 RAB5CP51148 216 aa8.55□□□□□ -1.04
ATG4B-222ENST00000491867 CCL20P78556 96 aa8.55□□□□□ -1.04
ATG4B-222ENST00000491867 PRSS3P2Q8NHM4 247 aa8.55□□□□□ -1.04
ATG4B-222ENST00000491867 NIT2Q9NQR4 276 aa8.55□□□□□ -1.04
ATG4B-222ENST00000491867 F2Z2F3 143 aa8.54□□□□□ -1.04
ATG4B-222ENST00000491867 UBE2L6O14933 153 aa8.54□□□□□ -1.04
ATG4B-222ENST00000491867 TRGC1P0CF51 173 aa8.54□□□□□ -1.04
ATG4B-222ENST00000491867 EIF5AP63241 154 aaKnown RBP8.54□□□□□ -1.04
ATG4B-222ENST00000491867 SMIM12Q96EX1 92 aa8.54□□□□□ -1.04
ATG4B-222ENST00000491867 TRAV1-1A0A0B4J248 108 aa8.53□□□□□ -1.04
ATG4B-222ENST00000491867 XKRY2A2RUG3 117 aa8.53□□□□□ -1.04
ATG4B-222ENST00000491867 NDUFS6O75380 124 aaKnown RBP8.53□□□□□ -1.04
ATG4B-222ENST00000491867 AMTP48728 403 aa8.53□□□□□ -1.04
ATG4B-222ENST00000491867 GNG4P50150 75 aa8.53□□□□□ -1.04
ATG4B-222ENST00000491867 SULT1A2P50226 295 aa8.53□□□□□ -1.04
ATG4B-222ENST00000491867 COTL1Q14019 142 aa8.53□□□□□ -1.04
ATG4B-222ENST00000491867 LYZL1Q6UWQ5 148 aa8.53□□□□□ -1.04
ATG4B-222ENST00000491867 C15orf56Q8N910 161 aa8.53□□□□□ -1.04
ATG4B-222ENST00000491867 TRBV20OR9-2A0A075B6H5 130 aa8.52□□□□□ -1.05
ATG4B-222ENST00000491867 RAB19A4D1S5 217 aa8.52□□□□□ -1.05
ATG4B-222ENST00000491867 IFNA1P01562 189 aa8.52□□□□□ -1.05
ATG4B-222ENST00000491867 Q6ZRP5 223 aa8.52□□□□□ -1.05
ATG4B-222ENST00000491867 GAGE12HA6NDE8 117 aa8.51□□□□□ -1.05
ATG4B-222ENST00000491867 NTF3P20783 257 aa8.51□□□□□ -1.05
ATG4B-222ENST00000491867 CTRLP40313 264 aa8.51□□□□□ -1.05
ATG4B-222ENST00000491867 RPS10P46783 165 aaKnown RBP8.51□□□□□ -1.05
ATG4B-222ENST00000491867 MEF2BQ02080 365 aaPredicted RBP8.51□□□□□ -1.05
ATG4B-222ENST00000491867 PDE6DO43924 150 aa8.5□□□□□ -1.05
ATG4B-222ENST00000491867 PRR4Q16378 134 aa8.5□□□□□ -1.05
ATG4B-222ENST00000491867 CFAP161Q6P656 301 aa8.5□□□□□ -1.05
ATG4B-222ENST00000491867 C9orf62Q8N4C0 152 aa8.5□□□□□ -1.05
ATG4B-222ENST00000491867 CNFNQ9BYD5 112 aa8.5□□□□□ -1.05
ATG4B-222ENST00000491867 A0A096LNI7 61 aa8.49□□□□□ -1.05
ATG4B-222ENST00000491867 TRAV26-2A0A0B4J265 109 aa8.49□□□□□ -1.05
ATG4B-222ENST00000491867 IGKV3OR2-268A0A0C4DH90 116 aa8.49□□□□□ -1.05
ATG4B-222ENST00000491867 TEX46H3BTG2 121 aa8.49□□□□□ -1.05
ATG4B-222ENST00000491867 HIGD2BQ4VC39 106 aa8.49□□□□□ -1.05
ATG4B-222ENST00000491867 ZNF664Q8N3J9 261 aa8.49□□□□□ -1.05
ATG4B-222ENST00000491867 BIN3Q9NQY0 253 aa8.49□□□□□ -1.05
ATG4B-222ENST00000491867 PSORS1C2Q9UIG4 136 aa8.49□□□□□ -1.05
ATG4B-222ENST00000491867 TWIST1Q15672 202 aa8.48□□□□□ -1.05
ATG4B-222ENST00000491867 GATD1Q8NB37 220 aa8.48□□□□□ -1.05
ATG4B-222ENST00000491867 CHCHD10Q8WYQ3 142 aaPredicted RBP8.48□□□□□ -1.05
ATG4B-222ENST00000491867 MED9Q9NWA0 146 aa8.48□□□□□ -1.05
ATG4B-222ENST00000491867 GVQW2A0A096LPI5 108 aaPredicted RBP8.47□□□□□ -1.05
ATG4B-222ENST00000491867 AMMECR1LQ6DCA0 310 aa8.47□□□□□ -1.05
ATG4B-222ENST00000491867 Q6ZNX1 250 aa8.47□□□□□ -1.05
ATG4B-222ENST00000491867 PRR26Q8N8Z3 221 aa8.47□□□□□ -1.05
ATG4B-222ENST00000491867 NUDT10Q8NFP7 164 aa8.47□□□□□ -1.05
ATG4B-222ENST00000491867 NUDT11Q96G61 164 aa8.47□□□□□ -1.05
ATG4B-222ENST00000491867 FSIP2Q5CZC0 6907 aa8.47□□□□□ -1.05
ATG4B-222ENST00000491867 NCR2O95944 276 aa8.46□□□□□ -1.06
ATG4B-222ENST00000491867 BCL2P10415 239 aa8.46□□□□□ -1.06
ATG4B-222ENST00000491867 EIF5AL1Q6IS14 154 aaKnown RBP8.46□□□□□ -1.06
ATG4B-222ENST00000491867 RPL39LQ96EH5 51 aaKnown RBP8.46□□□□□ -1.06
ATG4B-222ENST00000491867 RPP21Q9H633 154 aaKnown RBP8.46□□□□□ -1.06
ATG4B-222ENST00000491867 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.45□□□□□ -1.06
ATG4B-222ENST00000491867 IGKV2-29A2NJV5 120 aaPredicted RBP8.45□□□□□ -1.06
ATG4B-222ENST00000491867 H7C423 109 aa8.45□□□□□ -1.06
ATG4B-222ENST00000491867 APCSP02743 223 aa8.45□□□□□ -1.06
ATG4B-222ENST00000491867 RNASE7Q9H1E1 156 aaKnown RBP8.45□□□□□ -1.06
ATG4B-222ENST00000491867 LINC00474Q9P2X8 69 aa8.45□□□□□ -1.06
ATG4B-222ENST00000491867 K7EN84 100 aa8.44□□□□□ -1.06
ATG4B-222ENST00000491867 FGF6P10767 208 aa8.44□□□□□ -1.06
ATG4B-222ENST00000491867 FOXI1Q12951 378 aa8.44□□□□□ -1.06
ATG4B-222ENST00000491867 RNASEKQ6P5S7 137 aaKnown RBP8.44□□□□□ -1.06
ATG4B-222ENST00000491867 SDHAF1A6NFY7 115 aa8.43□□□□□ -1.06
ATG4B-222ENST00000491867 ZNF25P17030 456 aaPredicted RBP8.43□□□□□ -1.06
ATG4B-222ENST00000491867 TEX261Q6UWH6 196 aa8.43□□□□□ -1.06
ATG4B-222ENST00000491867 XCL1P47992 114 aa8.42□□□□□ -1.06
ATG4B-222ENST00000491867 FOXA3P55318 350 aaPredicted RBP8.42□□□□□ -1.06
ATG4B-222ENST00000491867 SMIM15Q7Z3B0 74 aa8.42□□□□□ -1.06
ATG4B-222ENST00000491867 OR5A1Q8NGJ0 315 aa8.42□□□□□ -1.06
ATG4B-222ENST00000491867 TAGLN2P37802 199 aaKnown RBP8.41□□□□□ -1.06
ATG4B-222ENST00000491867 OCC1Q8TAD7 63 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms